Nucleotide Global Alignment

Description

Query:
TRCN0000466780
Subject:
NM_018903.4
Aligned Length:
2887
Identities:
1755
Gaps:
896

Alignment

Query    1  ATGGT--TT------CCAGATGTAGCTGCCTGGGGGTCCAGTGTCTGCTGCTCTCGCTTCTTCTCCTCGCAGCC  66
            |||||  ||      |||     ||..|||.|||...||||.|||||||||||||||||||.|||||.||||||
Sbjct    1  ATGGTGATTATCGGACCA-----AGAGGCCCGGGATCCCAGCGTCTGCTGCTCTCGCTTCTGCTCCTTGCAGCC  69

Query   67  TGGGAGGTGGGGAGCGGCCAGCTCCACTACTCAGTCTACGAGGAGGCCAGACACGGCACCTTCGTGGGCCGCAT  140
            ||||||||||||||||||||||||||||||||.||||||||||||||||.||||||||||||||||||||||||
Sbjct   70  TGGGAGGTGGGGAGCGGCCAGCTCCACTACTCCGTCTACGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCAT  143

Query  141  CGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAAGACACGGGG  214
            |||.||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  144  CGCTCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCCGGGTGGCGTCCAAAAGACACGGGG  217

Query  215  ACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATTGACCGCGAGGAGCTGTGCGGG  288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||||||
Sbjct  218  ACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGCGAGAAGCTGTGCGGG  291

Query  289  CGGAGCGTGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGA  362
            |||||||.|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  292  CGGAGCGCGGAGTGCAGTATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGA  365

Query  363  AGTGAAGGACATTAACGACAACCCGCCCAGGTTCTCCGTAACAGAACAAAAGCTCTCAATACCTGAATCCAGAC  436
            .||||||||||||||||||||||||||...||||...|.||..|||||||||.|..|..|..||||||     |
Sbjct  366  GGTGAAGGACATTAACGACAACCCGCCGGTGTTCAGAGAAAGGGAACAAAAGGTACCTGTTTCTGAAT-----C  434

Query  437  TG-----CTTGACTCTCGATTTCCACTAGAAGGCGCATCTGATGCGGATGTTGGAGAGAACGCATTGCTTAC--  503
            ||     ||.|||||||..|||||.|||||.|||||.||||||||||||.|.||.|..|||.|..|..|.||  
Sbjct  435  TGCGCCTCTGGACTCTCATTTTCCTCTAGAGGGCGCTTCTGATGCGGATATCGGCGTAAACTCTCTTTTGACCT  508

Query  504  -----TTACAAACTCAGTCCAAATGAGTATTTTGTTCTTGATATTATAAAC-AAAAAAGACAAAGACAAATTCC  571
                 |||       ||||.|||||||.||||||..||| |.|.||.|||| ||||||||.|||...|.|||.|
Sbjct  509  ATGCGTTA-------AGTCTAAATGAGAATTTTGAGCTT-AAAATAAAAACAAAAAAAGATAAAAGTATATTGC  574

Query  572  CAGTGCTTGTTCTGCGGAAGCTGCTGGATCGTGAAGAAAATCCTCAGCTAAAGTTGTTGTTGACAGCAACTGAT  645
            |.|...|.|||||.||||||.|..||||..|.||..|||..||..|.||.||.||.|||.|||..|.||..|||
Sbjct  575  CTGAATTAGTTCTTCGGAAGTTATTGGACAGAGAGCAAACGCCAAAACTCAATTTATTGCTGATGGTAATCGAT  648

Query  646  GGAGGCAAACCTGAATTTACCGGATCTGT-----TTCTCTGCTGA--------TCCTGG-TGTTAGATGCCAAT  705
            ||.||.|||||.|||.|.||.||.|||||     |||       |        |||||| |||.| |||.||||
Sbjct  649  GGCGGTAAACCAGAACTAACAGGGTCTGTCCAGATTC-------AAATAACCGTCCTGGATGTGA-ATGACAAT  714

Query  706  GATAACGCCCCTATCTTTGA-CAGACCGGTTTATGAAGTTAAGATGTATGAAAAT---CAAGTGAACCAAACAT  775
            |.|      ||....||||| .||.||.| .|||.||||...|.|||.|||||||   |||   |||.|.|||.
Sbjct  715  GGT------CCGGCGTTTGATAAGCCCAG-CTATAAAGTAGTGTTGTCTGAAAATGTCCAA---AACGACACAA  778

Query  776  TAGTAATACGGCTCAACGCTTCTGATTCGGATGAAGGAATAAACAAGGAAATGATGTATTCATTTAGCTCTTTG  849
            .|||.||.|..||.||.|||||.|||.|.||.||||||.|.||....|||||      |||        ||.||
Sbjct  779  GAGTGATCCAACTAAATGCTTCCGATCCAGACGAAGGACTTAATGGAGAAAT------TTC--------CTATG  838

Query  850  GTCCCACCCACGATAAGAAGGAAATTTTG---------GATAAACGAAAG-----------------GACGGGA  897
            |          |||.|.||.|  ||||||         ||.|||.|.|.|                 .||.||.
Sbjct  839  G----------GATCAAAATG--ATTTTGCCAGTGAGTGAGAAATGTATGTTTTCAATAAATCCAGACACAGGT  900

Query  898  GAAATAAAAGTAAATGATGCTATTGACTTTGAGGACAGTAACACTTATGAAATTCATGTAGATGTTACAGAT-A  970
            |||||.|.|.|..|||.||...|.||.|||||.||.|.|||..|.|||||||||||.||..|.|..|..||| |
Sbjct  901  GAAATTAGAATTTATGGTGAACTGGATTTTGAAGAGAATAATGCCTATGAAATTCAGGTTAACGCCATTGATAA  974

Query  971  AGGGAAACCCACCTATGGTTGGTCACTGCACGGTCCTAGTGGAACTACTGGATGAAAATGATAAT-TCACCTGA  1043
            |||||..||..|| ||||..||||||.|||.||||||.||||||.|.|||||.|..|||||.||| || |||||
Sbjct  975  AGGGATTCCTTCC-ATGGCAGGTCACAGCATGGTCCTGGTGGAAGTTCTGGACGTGAATGACAATGTC-CCTGA  1046

Query 1044  GGTGATTGTCACTTCTCTGTCTCTCCCAGTGAAAGAAGATGCTCAAGTGGGCACCGTCATTGCCCTAATCAGCG  1117
            .||.||.||.|||||.|||||.|||||.|||.||||.||||||||.|||||.||||||||||||||.||.||||
Sbjct 1047  AGTAATGGTTACTTCACTGTCGCTCCCTGTGCAAGAGGATGCTCAGGTGGGTACCGTCATTGCCCTGATTAGCG  1120

Query 1118  TTTCTGACCATGATTCAGGAGCCAACGGACAGGTCACCTGCTCTCTGACGCCTCACGTTCCGTTCAAGCTGGTG  1191
            |.||.||.|.|||.||.||||||||.||||||||||.||||||.|||||.|||||.|||||.||||||||||||
Sbjct 1121  TGTCGGATCGTGACTCTGGAGCCAATGGACAGGTCATCTGCTCACTGACACCTCATGTTCCCTTCAAGCTGGTG  1194

Query 1192  TCCACCTACAAGAATTACTACTCATTGGTGCTGGACAGCGCTCTGGACCGCGAGAGGGTGTCGGCCTATGAGCT  1265
            |||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||||||||||||||
Sbjct 1195  TCCACCTACAAGAATTACTACTCGTTGGTGCTGGACAGCGCCCTGGACCGCGAGAGCGTGTCGGCCTATGAGCT  1268

Query 1266  GGTGGTGACCGCGCGGGACGGGGGCTCGCCTCCGCTGTGGGCCACGGCCAGCGTGTCTGTGGAGGTGGCCGACG  1339
            |||||||||.||||||||.||||||||||||.||||||||||||||||.||.|||||.||||||||||||||||
Sbjct 1269  GGTGGTGACTGCGCGGGATGGGGGCTCGCCTTCGCTGTGGGCCACGGCTAGAGTGTCCGTGGAGGTGGCCGACG  1342

Query 1340  TGAACGACAACGCGCCTGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAACCCGCCAGGCTGC  1413
            ||||||||||.||||||||||||||||||.||||||||||.||||||||||||||||||||||||||.||||||
Sbjct 1343  TGAACGACAATGCGCCTGCGTTCGCGCAGCCCGAGTACACAGTGTTCGTGAAGGAGAACAACCCGCCGGGCTGC  1416

Query 1414  CACATCTTCACGGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTCTCTGGTGGAGCG  1487
            |||||||||||||||||.||.||||||||||||||||||.|||||||.||||||||||||||.|||||||||||
Sbjct 1417  CACATCTTCACGGTGTCGGCATGGGACGCGGACGCGCAGAAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCG  1490

Query 1488  GCGGTTGGGCGAGCGCTCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGC  1561
            ||||.|||||||||.|.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1491  GCGGGTGGGCGAGCACGCACTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGC  1564

Query 1562  CGCTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAG------------------------------------  1599
            ||||.|||||||||||||||||||||||.|||||||||                                    
Sbjct 1565  CGCTAGACCACGAGGAGCTGGAGCTGCTGCAGTTCCAGGTGAGCGCGCGCGACGCCGGCGTGCCGCCTCTGGGC  1638

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1639  AGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCACTGCTGGCGACTCCGGCTGG  1712

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1713  CAGCGCAGGAGGCGCAGTTAGCGAGTTGGTACCGCGGTCGGTGGGTGCGGGCCACGTGGTGGCGAAAGTGCGCG  1786

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1787  CGGTGGACGCTGACTCCGGCTATAACGCTTGGCTGTCCTACGAGTTGCAACCGGCGGCGGTCGGCGCGCACATC  1860

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1861  CCGTTCCACGTGGGGCTGTACACTGGCGAGATCAGCACGACACGCATCCTGGATGAGGCGGACGCTCCGCGCCA  1934

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1935  CCGCCTGCTGGTGCTGGTGAAGGACCACGGTGAGCCCGCGCTGACGTCCACGGCCACGGTGCTGGTGTCGCTGG  2008

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2009  TGGAGAACGGCCAGGCCCCAAAGACGTCGTCGCGGGCCTCAGTGGGCGCTGTGGATCCCGAAGCGGCTCTGGTG  2082

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2083  GATATTAACGTGTACCTCATCATCGCCATCTGTGCGGTGTCCAGCCTGCTGGTGCTCACGCTGCTGCTGTACAC  2156

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2157  TGCGCTGCGTTGCTCAGCGCCGCCCACCGTGAGCCGGTGCGCGCCGGGCAAGCCCACGCTGGTGTGCTCCAGCG  2230

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2231  CCGTGGGGAGTTGGTCTTACTCGCAGCAGAGGAGGCAGAGGGTGTGCTCTGCAGAGAGCCCGCCCAAGACGGAC  2304

Query 1600  ---------------------------------------------------------------CCACGACAGCC  1610
                                                                           |||||||||||
Sbjct 2305  CTCATGGCCTTCAGCCCAAGCCTTCAGCTGTCTCGAGAAGATTGTTTAAATCCTCCCAGTGAACCACGACAGCC  2378

Query 1611  CAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCA  1684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2379  CAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCA  2452

Query 1685  TTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCA  1758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2453  TTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCA  2526

Query 1759  GGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCC  1832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2527  GGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCC  2600

Query 1833  CAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGC  1906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2601  CAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGC  2674

Query 1907  AGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAG  1980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2675  AGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAG  2748

Query 1981  AAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCA  2054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2749  AAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCA  2822

Query 2055  G  2055
            |
Sbjct 2823  G  2823

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