Nucleotide Global Alignment

Description

Query:
TRCN0000466780
Subject:
NM_018911.3
Aligned Length:
2926
Identities:
1742
Gaps:
947

Alignment

Query    1  ATGGTTT--------CCAGATGTAGCTGCCTGGGGGTCC-AGTGTCTGCTGCTCTCGCTTCTTCTCCTCGCAGC  65
            ||||.||        |.||..| ||||     |||.||| .|.|.||.||.||||.||||||.|||||||||||
Sbjct    1  ATGGATTATCACTGGCGAGGAG-AGCT-----GGGATCCTGGCGACTACTACTCTTGCTTCTGCTCCTCGCAGC  68

Query   66  CTGGGAGGTGGGGAGCGGCCAGCTCCACTACTCAGTCTACGAGGAGGCCAGACACGGCACCTTCGTGGGCCGCA  139
            ||||.||||||||||||||||||||||||||||.|||..|||||||||||.|||||||||||||||||||||.|
Sbjct   69  CTGGAAGGTGGGGAGCGGCCAGCTCCACTACTCCGTCCCCGAGGAGGCCAAACACGGCACCTTCGTGGGCCGGA  142

Query  140  TCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCAGCGCCTGTTCCGGGTGGCGTCCAAAAGACACGGG  213
            |||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.||
Sbjct  143  TCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCCGGGTGGCGTCCAAAAGACACCGG  216

Query  214  GACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATTGACCGCGAGGAGCTGTGCGG  287
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  217  GACCTTCTGGAGGTAAGTCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGCGAGGAGCTGTGCGG  290

Query  288  GCGGAGCGTGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGG  361
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  291  GCGGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGG  364

Query  362  AAGTGAAGGACATTAACGACAACCCGCCCAG-GTTCTCCGTAACAGAACAAAAGCTCTCAATACCTGAATCCAG  434
            |.||||||||..||||.||||||||| |||| ||||...||||.|||.||||||||.|...|..|.||||||||
Sbjct  365  AGGTGAAGGATGTTAATGACAACCCG-CCAGTGTTCCGGGTAAAAGACCAAAAGCTGTTTGTTTCAGAATCCAG  437

Query  435  ACTGCTTGACTCTCGATTTCCACTAGAAGGCGCATCTGATGCGGATGTTGGAGAGAACGCATTGCTTACTTACA  508
            |.|||..||||||||.|||||.|||||.|||||.||.|||||.||||||||||..|||.|..||.|.||.||||
Sbjct  438  AATGCCAGACTCTCGGTTTCCGCTAGAGGGCGCGTCCGATGCAGATGTTGGAGCTAACTCCGTGTTAACCTACA  511

Query  509  AACTCAGTCCAAATGAGTATTTTGTTCTTGAT----ATTATAAACAAAAAAGACAAAGACAAATTCCCAGTGCT  578
            ..||.||..|..||||.||.||..|.||.|||    |||     ||||.|  ||.|.||.||            
Sbjct  512  GGCTTAGCTCTCATGATTACTTCATGCTAGATGTGAATT-----CAAAGA--ACGATGAGAA------------  566

Query  579  TGTTCTGCGGAAGCTGCTGGA--TCG--TGAAGAAAATCCT----CAGCTAAAG------------------TT  626
                     .||.|||.|.||  |||  |.|||||||||||    |||  |.||                  ||
Sbjct  567  ---------TAAACTGGTTGAGCTCGTATTAAGAAAATCCTTGGACAG--AGAGGACGCTCCTGCGCACCACTT  629

Query  627  GTTGTTGACAGCAACTGATGGAGGCAAACCTGAATTTACCGGATCTGTTTCTCTGCTGATCCTGGTGTTAGATG  700
            .||..|||||||.||.|||||.|||||||||||..|.||.||..|||||...||||||.||...|||.|.||||
Sbjct  630  ATTCCTGACAGCCACAGATGGGGGCAAACCTGAGCTCACAGGCACTGTTCAGCTGCTGGTCACAGTGCTGGATG  703

Query  701  CCAATGATAACGCCCCTATCTTT--GACAGACCGGTTTATGAAGTTAAGATGTAT--GAAAATCAAGTGAACCA  770
            ..||||||||.||.||.| ||||  .|||| .|.|..||.|||| ||||| .|||  |||||...||..|||..
Sbjct  704  TGAATGATAATGCTCCCA-CTTTCGAACAG-TCTGAATACGAAG-TAAGA-ATATTCGAAAACGCAGACAACGG  773

Query  771  AACATTAGTAATACGGCTCAACGCTTCTGATTCGGATGAAGGAATAAACAAGGAAATGATGTATTCATT---TA  841
            ||||..|||.||....||.||.|||||||||.|||||||||||...||...||.|||....|||||.||   ||
Sbjct  774  AACAACAGTTATCAAACTGAATGCTTCTGATCCGGATGAAGGAGCCAATGGGGCAATTTCATATTCTTTTAATA  847

Query  842  GCTCTT----------TGGT-----CCCACCCACGATAAGAAGGAAATTTTGGATA-AACGAAAGGACGGGAGA  899
            || |||          ||||     .||||                 |||.|.||| |.||||| .||||||||
Sbjct  848  GC-CTTGTTGAAACTATGGTTATTGACCAC-----------------TTTAGCATAGATCGAAA-TACGGGAGA  902

Query  900  AATAAAAGTAAATGATGC-------TATTGACTTTGAGGACAGTAACACTTAT--GAAAT--TCATGTAGATGT  962
            |||       |.||||.|       |.|.||.|||||  |||..||.||||||  .||||  |||  |.||.|.
Sbjct  903  AAT-------AGTGATTCGGGGTAATTTGGATTTTGA--ACAAGAAAACTTATACAAAATCCTCA--TTGACGC  965

Query  963  TACAGATAAGGGAAACCCACCTATGGTTGGTCACTGCACGGTCCTAGTG-GAACTACTGGATGAAAATGATAA-  1034
            .||.||.||.||..|.||.||.||||..|||||.|||||.||..||||| ||| |..|||||.|||||||||| 
Sbjct  966  CACGGACAAAGGCCATCCTCCCATGGCGGGTCATTGCACCGTTTTAGTGAGAA-TTTTGGATAAAAATGATAAC  1038

Query 1035  TTCACCTGAGGTGATTG---TCACTTCTCTGTCTCTCCCAGTGAAAGAAGATGCTCAAGTGGGCACCGTCATTG  1105
            .|| |||||   |||.|   |.|||||..|.||..|.||.||....|||||.||||||.|.||.||.|||||.|
Sbjct 1039  GTC-CCTGA---GATAGCACTGACTTCCTTATCCTTGCCTGTACGTGAAGACGCTCAATTTGGTACTGTCATCG  1108

Query 1106  CCCTAATCAGCGTTTCTGACCATGATTCAGGAGCCAACGGACAGGTCACCTGCTCTCTGACGCCTCACGTTCCG  1179
            |||||||.|||||....||||..||||||||.||||||||.|||||.||||||||.||||.|||.||.||.||.
Sbjct 1109  CCCTAATTAGCGTGAACGACCTCGATTCAGGTGCCAACGGGCAGGTGACCTGCTCCCTGATGCCCCATGTCCCC  1182

Query 1180  TTCAAGCTGGTGTCCACCTACAAGAATTACTACTCATTGGTGCTGGACAGCGCTCTGGACCGCGAGAGGGTGTC  1253
            |||||||||||||||||||.|||||||||||||||.|||||||||||||||||.||||||||||||||.|||||
Sbjct 1183  TTCAAGCTGGTGTCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGCGCCCTGGACCGCGAGAGAGTGTC  1256

Query 1254  GGCCTATGAGCTGGTGGTGACCGCGCGGGACGGGGGCTCGCCTCCGCTGTGGGCCACGGCCAGCGTGTCTGTGG  1327
            ||||||||||.|||||||.||||||||||||||||||||||||.|||||||||||||.||||||.|||||||||
Sbjct 1257  GGCCTATGAGTTGGTGGTAACCGCGCGGGACGGGGGCTCGCCTTCGCTGTGGGCCACCGCCAGCTTGTCTGTGG  1330

Query 1328  AGGTGGCCGACGTGAACGACAACGCGCCTGCGTTCGCGCAGTCCGAGTACACGGTGTTCGTGAAGGAGAACAAC  1401
            ||||||||||||||||||||||.||.||.||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1331  AGGTGGCCGACGTGAACGACAATGCTCCGGCGTTCGCGCAGCCCGAGTACACGGTGTTCGTGAAGGAGAACAAC  1404

Query 1402  CCGCCAGGCTGCCACATCTTCACGGTGTCTGCGTGGGACGCGGACGCGCAGGAGAACGCCCTGGTGTCCTACTC  1475
            |||||.|||||||||||||||||||||||||||.|.|||||||||||||||||||||||.||||||||||||||
Sbjct 1405  CCGCCGGGCTGCCACATCTTCACGGTGTCTGCGCGAGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTC  1478

Query 1476  TCTGGTGGAGCGGCGGTTGGGCGAGCGCTCGCTGTCGAGCTACGTGTCGGTGCACGCGGAGAGCGGCAAGGTGT  1549
            .||.||||||||||||.||||||||||||||||||||||||||.|.|||||||||.||||||||||||||||||
Sbjct 1479  GCTTGTGGAGCGGCGGGTGGGCGAGCGCTCGCTGTCGAGCTACATTTCGGTGCACACGGAGAGCGGCAAGGTGT  1552

Query 1550  ACGCGCTGCAGCCGCTGGACCACGAGGAGCTGGAGCTGCTACAGTTCCAG------------------------  1599
            |||||||||||||||||||||||||||||||.||||||||.|||||||||                        
Sbjct 1553  ACGCGCTGCAGCCGCTGGACCACGAGGAGCTAGAGCTGCTGCAGTTCCAGGTGAGCGCGCGCGACGCGGGCGTG  1626

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1627  CCGCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAATGACAACGCGCCGGCACTGCTGGA  1700

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1701  GCCTCGGGTGGGTGGCACTGGTGGCGCAGCGAGCAAGCTGGTGCCGCGGTCTGTGGGCGCGGGCCACGTGGTAG  1774

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1775  CGAAGGTGCGCGCAGTGGACGCCGACTCGGGCTACAACGCGTGGCTTTCGTATGAGCTGCAGCCAGCTGCAAGC  1848

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1849  AGCCCTCGCATCCCGTTCCGCGTGGGGCTGTACACGGGCGAGATCAGCACCACTCGTGTCCTGGACGAAGCGGA  1922

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1923  CTCTCCGCGCCACCGTCTGCTGGTCCTGGTGAAGGATCATGGTGAACCTGCGCTGACCGCCACGGCCACGGTTC  1996

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 1997  TGGTGTCGCTGGTGGAGAGCGGCCAGGCTCCAAAAGCGTCATCGAGGCAGTCGGCTGGCGTTTTGGGTCCGGAA  2070

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2071  GCGGCGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGCGGTATCCAGCCTGCTGGTGCTCACGCT  2144

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2145  GCTGCTGTACACTGCGCTGCGGTGCTCAGCACTGCCCACTGAGGGCGGGTGCCGGGCGGGCAAGCCCACTCTGG  2218

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2219  TGTGCTCCAGTGCGGTGGGGAGCTGGTCATACTCGCAACAACAGCCGCAGAGGGTGTGCTCTGGTGAGGGGCCA  2292

Query 1600  --------------------------------------------------------------------------  1599
                                                                                      
Sbjct 2293  CCGAAGACGGACCTCATGGCCTTCAGCCCCTGCCTTCCTCCTGATCTGGGATCAGTTGATGTAGGCGAAGAGCA  2366

Query 1600  ----------------------------CCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAG  1645
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2367  AGATTTAAATGTTGATCATGGCCTCAAACCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAG  2440

Query 1646  CAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAG  1719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2441  CAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAG  2514

Query 1720  TGGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAA  1793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2515  TGGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAA  2588

Query 1794  CAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAAT  1867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2589  CAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAAT  2662

Query 1868  TCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGAC  1941
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2663  TCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGAC  2736

Query 1942  TTCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAA  2015
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2737  TTCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAGACCCAGGAGAA  2810

Query 2016  AAAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCAG  2055
            ||||||||||||||||||||||||||||||||||||||||
Sbjct 2811  AAAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCAG  2850

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