Nucleotide Global Alignment

Description

Query:
TRCN0000466980
Subject:
XR_001740295.2
Aligned Length:
2077
Identities:
1279
Gaps:
797

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCGGTGTCCGCCCCACGGCCGGCGTTGCCGGGGTAACGGCGAGCGCGTGGGGCCAAGAAAGAATACCTCCTCT  74

Query    1  -----ATGGCAGAAGCTGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTG  69
                 |||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTG  148

Query   70  CCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAA  143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAA  222

Query  144  TGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAA  217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAA  296

Query  218  GAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCT  291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCT  370

Query  292  ATCATCACATCAAAGAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGA  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATCATCACATCAAAGAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGA  444

Query  366  GAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGG  439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGG  518

Query  440  CTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCT  513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCT  592

Query  514  GTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGG  587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGG  666

Query  588  CTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCT  661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCT  740

Query  662  GTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTC  735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTC  814

Query  736  CTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAG  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAG  888

Query  810  GGAGGCTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTG  883
            ||||||||||||||||||||||                                                    
Sbjct  889  GGAGGCTGCCCCAAATGAGGAA----------------------------------------------------  910

Query  884  AGTATTTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAG  957
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  911  --------------------------GCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAG  958

Query  958  AAGGAGCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACAT  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  AAGGAGCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACAT  1032

Query 1032  GGCCTACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTAT  1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1033  GGCCTACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTAC------  1100

Query 1106  ATCGGAAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGC  1179
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1101  -------------------------------TTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGC  1143

Query 1180  TCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACT  1253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144  TCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACT  1217

Query 1254  TATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGA  1327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1218  TATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGA  1291

Query 1328  TTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTT------  1395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1292  TTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAACAA  1365

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1366  TTCAACCTCAAATTTCTAATTTCACCAACAACTATTTATTGAGGGCTAGGTAAAAAGTTCTTTTTGTTGTAATC  1439

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1440  GTCCATTAATTCATAAGTTTTAAAGGGCATGGTGCTCCCAGCACCAGAAAACTATCAGTGTTTTTAAAGATAAA  1513

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1514  TTACACAAGGGAGGAGAAAGATCCCTGTGCTAGGACTGCAGATTCTATACTTGCGTTGGCCTCTAACTCTCCAA  1587

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1588  TCCAGAGCCTCCTGCCTCTGGCGTCAGTCTTTTCCCTCATCCACTCACTGGGGAGATTGGACTAGAGGAGTCCT  1661

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1662  GAGAGGACACTTCCAACAAGAGACATTTATTCTCTGATTTTACCTGAAAATGGTAGTAGTTTACATTTATACAG  1735

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1736  TACAGTTTATGAAGCACTTTCATACGCAGGCATCTCTTGTTACCTACATCTAAGCTGTTCCCGAAAGAGTGTTA  1809

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1810  CAGAACACAACAGTATTGTACAATATTCGATAAGCATATCTTCACTGCACTTGTTATAAAAATGAGTGGTGAAA  1883

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1884  TAATGTTTGGAGACATAATGAAAGCGATTAACATTTGGCAAAATATAATAAAGCCTTTTTGTAATTGGTGAGAA  1957

Query 1396  -----  1395
                 
Sbjct 1958  AGTCA  1962

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