Nucleotide Global Alignment

Description

Query:
TRCN0000467596
Subject:
XM_017007674.1
Aligned Length:
1779
Identities:
1664
Gaps:
114

Alignment

Query    1  ATGGAGACGCCGCCGCTGCCTCCCGCATGCACAAAGCAGGGTCATCAGAAGCCTCTCGATTCAAAAGATGATAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTCAAAGTCATGAACGAATTAA  148
                                                    ||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------------------------------ATGAAGAAAGCTTTCAAAGTCATGAACGAATTAA  34

Query  149  GAAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTCTGCTCATAGAGTGGTGCTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   35  GAAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTCTGCTCATAGAGTGGTGCTG  108

Query  223  GCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTGAGATGAGTGAGAGCCGAGCAAAGAGAGTTAGAAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  109  GCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTGAGATGAGTGAGAGCCGAGCAAAGAGAGTTAGAAT  182

Query  297  AAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCAGAAATTCAGGTTACAGAAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  183  AAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCAGAAATTCAGGTTACAGAAG  256

Query  371  AAAATGTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAAGAAGACTTGTTGTGAATTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  257  AAAATGTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAAGAAGACTTGTTGTGAATTT  330

Query  445  TTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATATGCATGCATGTACCGACCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  TTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATATGCATGCATGTACCGACCT  404

Query  519  TCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTACTTAGTGAAGAATTTCTCAATCTTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  405  TCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTACTTAGTGAAGAATTTCTCAATCTTG  478

Query  593  GCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTCTTCAGAAGAGAAGGTATTTGAAGCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  479  GCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTCTTCAGAAGAGAAGGTATTTGAAGCA  552

Query  667  GTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGGCCCGACTGATGGAACATGTACGGTT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  553  GTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGGCCCGACTGATGGAACATGTACGGTT  626

Query  741  ACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAGAGGAAGCATTGGTCAAGAATAGCAGTGCTTGCA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  627  ACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAGAGGAAGCATTGGTCAAGAATAGCAGTGCTTGCA  700

Query  815  AAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCAGCGTATATTAATGAAGAGTGTCCGG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  701  AAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCAGCGTATATTAATGAAGAGTGTCCGG  774

Query  889  ACCCGGCTGAGGACACCCATGAACCTTCCCAAATTGATGGTGGTGGTTGGGGGCCAAGCACCAAAGGCTATCCG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  775  ACCCGGCTGAGGACACCCATGAACCTTCCCAAATTGATGGTGGTGGTTGGGGGCCAAGCACCAAAGGCTATCCG  848

Query  963  GAGTGTGGAATGCTATGACTTTAAAGAAGAAAGGTGGCACCAAGTAGCAGAGTTGCCTTCCGGGAGGTGCAGGG  1036
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  849  GAGTGTGGAATGCTATGACTTTAAAGAAGAAAGGTGGCACCAAGTAGCAGAGTTGCCTTCCAGGAGGTGCAGGG  922

Query 1037  CAGGCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAATGGCTCATTAAGAGTTCGCACTGTA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  923  CAGGCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAATGGCTCATTAAGAGTTCGCACTGTA  996

Query 1111  GATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGAGAGACCGGAGAAGCACTTTGGGAGC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  997  GATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGAGAGACCGGAGAAGCACTTTGGGAGC  1070

Query 1185  TGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGTTTGTCATCTGTGGAAGCAT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071  TGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGTTTGTCATCTGTGGAAGCAT  1144

Query 1259  ACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAGCAGTGTTGGTGTGGGTGTT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1145  ACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAGCAGTGTTGGTGTGGGTGTT  1218

Query 1333  GTTGGAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTCTTAGCACAGTAGAATGCTA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1219  GTTGGAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTCTTAGCACAGTAGAATGCTA  1292

Query 1407  TAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGTGGAGCAGGTGTTGGTGTGT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293  TAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGTGGAGCAGGTGTTGGTGTGT  1366

Query 1481  TAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAGTGTTGAAGTATATGATCCC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1367  TAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAGTGTTGAAGTATATGATCCC  1440

Query 1555  ACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAGGAGTTTGTGCAGTTAATGG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441  ACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAGGAGTTTGTGCAGTTAATGG  1514

Query 1629  TCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAATATTATAACCCAACAACCG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1515  TCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAATATTATAACCCAACAACCG  1588

Query 1703  ATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAGGGGTCACAGTTATTGATAAACCA  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1589  ATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAGGGGTCACAGTTATTGATAAACCA  1662

Query 1777  TTA  1779
            |||
Sbjct 1663  TTA  1665

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