Nucleotide Global Alignment

Description

Query:
TRCN0000467596
Subject:
XR_002959703.1
Aligned Length:
3106
Identities:
1769
Gaps:
1329

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCTCGTTGGCTGTATCTTCAAAATGTCCAGAACCCAGCCAGTTTTCATCACCTCCACTGCGACTGTCCTCCCT  74

Query    1  --------------------------------------------ATGGAGACGCCGCCGCTGCCT------CCC  24
                                                        ||  ||..|||.||..|.|.|      |||
Sbjct   75  AAGCCACTGTCATTTTTTAGTGAATTATTGTAATATCCTGCTAAAT--AGTTGCCCCCTTTTCATCTTTGACCC  146

Query   25  G-------------------------------------------CATGCACAAAGCAGGGTCATCAGAAGCCTC  55
            |                                           ||||||||||||||||||||||||||||||
Sbjct  147  GTGTAGAGTGTTCTCAACCAGCAGCCAAAGTGGTCTTTGGAAAACATGCACAAAGCAGGGTCATCAGAAGCCTC  220

Query   56  TCGATTCAAAAGATGATAATACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTC  129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  221  TCGATTCAAAAGATGATAATACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTC  294

Query  130  AAAGTCATGAACGAATTAAGAAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTC  203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  295  AAAGTCATGAACGAATTAAGAAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTC  368

Query  204  TGCTCATAGAGTGGTGCTGGCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTGAGATGAGTGAGAGCC  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  369  TGCTCATAGAGTGGTGCTGGCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTGAGATGAGTGAGAGCC  442

Query  278  GAGCAAAGAGAGTTAGAATAAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCA  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  443  GAGCAAAGAGAGTTAGAATAAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCA  516

Query  352  GAAATTCAGGTTACAGAAGAAAATGTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAA  425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  517  GAAATTCAGGTTACAGAAGAAAATGTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAA  590

Query  426  GAAGACTTGTTGTGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATA  499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  591  GAAGACTTGTTGTGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATA  664

Query  500  TGCATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTACTTAGT  573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  665  TGCATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTACTTAGT  738

Query  574  GAAGAATTTCTCAATCTTGGCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTCTTCAGA  647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  739  GAAGAATTTCTCAATCTTGGCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTCTTCAGA  812

Query  648  AGAGAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGGCCCGAC  721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  813  AGAGAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGGCCCGAC  886

Query  722  TGATGGAACATGTACGGTTACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAGAGGAAGCATTGGTC  795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  887  TGATGGAACATGTACGGTTACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAGAGGAAGCATTGGTC  960

Query  796  AAGAATAGCAGTGCTTGCAAAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCAGCGTAT  869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  961  AAGAATAGCAGTGCTTGCAAAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCAGCGTAT  1034

Query  870  ATTAATGAAGAGTGTCCGGACCCGGCTGAGGACACCCATGAACCTTCCCAAATTGATGGTGGTGGTTGGGGGCC  943
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035  ATTAATGAAGAGTGTCCGGACCCGGCTGAGGACACCCATGAACCTTCCCAAATTGATGGTGGTGGTTGGGGGCC  1108

Query  944  AAGCACCAAAGGCTATCCGGAGTGTGGAATGCTATGACTTTAAAGAAGAAAGGTGGCACCAAGTAGCAGAGTTG  1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109  AAGCACCAAAGGCTATCCGGAGTGTGGAATGCTATGACTTTAAAGAAGAAAGGTGGCACCAAGTAGCAGAGTTG  1182

Query 1018  CCTTCCGGGAGGTGCAGGGCAGGCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAATGGCTC  1091
            ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183  CCTTCCAGGAGGTGCAGGGCAGGCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAATGGCTC  1256

Query 1092  ATTAAGAGTTCGCACTGTAGATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGAGAGACC  1165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257  ATTAAGAGTTCGCACTGTAGATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGAGAGACC  1330

Query 1166  GGAGAAGCACTTTGGGAGCTGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGT  1239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331  GGAGAAGCACTTTGGGAGCTGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGT  1404

Query 1240  TTGTCATCTGTGGAAGCATACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAG  1313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405  TTGTCATCTGTGGAAGCATACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAG  1478

Query 1314  CAGTGTTGGTGTGGGTGTTGTTGGAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTC  1387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479  CAGTGTTGGTGTGGGTGTTGTTGGAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTC  1552

Query 1388  TTAGCACAGTAGAATGCTATAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGT  1461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553  TTAGCACAGTAGAATGCTATAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGT  1626

Query 1462  GGAGCAGGTGTTGGTGTGTTAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAG  1535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627  GGAGCAGGTGTTGGTGTGTTAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAG  1700

Query 1536  TGTTGAAGTATATGATCCCACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAG  1609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701  TGTTGAAGTATATGATCCCACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAG  1774

Query 1610  GAGTTTGTGCAGTTAATGGTCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAA  1683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1775  GAGTTTGTGCAGTTAATGGTCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAA  1848

Query 1684  TATTATAACCCAACAACCGATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAG----  1753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct 1849  TATTATAACCCAACAACCGATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAGCCTG  1922

Query 1754  ------------------------------------------------------------GGGTCACAGTTATT  1767
                                                                        ||||||||||||||
Sbjct 1923  CTCAATGTGAAGAGACAAGGATGAAGACCTTGATGATGATCCACTTCCCCTTAATGAATAGGGTCACAGTTATT  1996

Query 1768  GATAAACCATTA--------------------------------------------------------------  1779
            ||||||||||||                                                              
Sbjct 1997  GATAAACCATTATGAGCCTGAAGGACATTTTCAGCATATTTATACATGAGAAACAGCCTTCAACAAGTATTTGT  2070

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2071  GAAGTGACTGAGAATCTAGCACTTCTCCACTTGTAGCTGCACTTTAAGTCTCAGCAGAAGATACGATCGTCTGC  2144

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2145  CTTTATAGGCCTCAGATACTGAAGATTATTTTTGGTAGAAGCACCGTGTAGGCTTTTTCTGCAATGAGCAGCAG  2218

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2219  CTGACTGAATTTTCATAAGAAACTTGGACTGCAGGACTTAATCTGTAGTCTTTAGACAACAGTTGCTTTCATAA  2292

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2293  AGACTAGTTCTTATCAACCTTGAATGACTACAGATTATTTTGTGAAGGAGGATGAAGTAATGTGTGTTCTTGTA  2366

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2367  AAATTAAATTTTATCTTTATTTCTTCTAAAAATCTGTATACCAGGAACTGAAAATCTTTGAACAGATATTAAAA  2440

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2441  TCTACGTAAGTATACAAACTAGTTGAGGGATACACTGTTTGCTTTTATAAAATAACTTTGATTACATGAATATA  2514

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2515  ATAAATTATGTGCATATAAATGTGTGTCTATATGCTTTCCTTTAAATATGTTTGAAAAGATGTTTGAAACTTGA  2588

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2589  TTATACTATTTATAATTGGCACAGTACTTTGAATTATGCCAGTACTACATTGTAAAACAGAGTTGTATTTTTTG  2662

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2663  ATATTTAACAATGCTTAACACTTTAAATGCCACTTCTGAGGAATGGACCTGGTGTAACACACTTGAATATGTGT  2736

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2737  GATGCCAAACTTTTTAAAATACAATATAAATTATGCTTATTTATTATTTTCTTTAGTTTAATCTTGGTCATGTT  2810

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2811  TTGGTGTGTATTTTTAATTTTTTTCTTAAATTAACACTTTGGCATGAACATTACTGCAGGTTTTTGATGAATAT  2884

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2885  AATGAATGTATGGAATTCAATTGAATTTGCATGGTCTTCGGAATTTTTTCTGTGTGTATAAATTTAGCTGCTAT  2958

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2959  TAACAGAAGAGAGAACTTTCTGTGAGTAGCCATGTGTGTTGATCAGATACAGTTTTTCTGAGATCTTCAATTAA  3032

Query 1780  ------------------------------------------------------------------------  1779
                                                                                    
Sbjct 3033  TCTCACTTTAAAAATGACCAAAACATGTCTTTCTTGAATTAACTTTGAATAAAAGTTTGTATATTATTTGTT  3104

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