Nucleotide Global Alignment

Description

Query:
TRCN0000467722
Subject:
NR_104214.1
Aligned Length:
1996
Identities:
1464
Gaps:
515

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTAGCGATGCGCATCCGGGTCACGCTAACGCCGCGGTTTCCTCCGCTCGATTGGTTCTACTGTGGGTCTGGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGATCTCCATGTCCTGTTGTGGGGCTTTTACAGCCTTTGGATTGTGAAAACTGCTGAGAGAGACTTGCAATCCA  148

Query    1  ----------------------------------ATGGAAGAAGAGCAAGATTTACCAGAGCAACCAGTGAAAA  40
                                              ||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTCACATAAGTATAATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCAACCAGTGAAAA  222

Query   41  AAGCCAAGATGCAGGAATCAGGAGAGCAAACTATAAGTCAAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCT  114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGCCAAGATGCAGGAATCAGGAGAGCAAACTATAAGTCAAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCT  296

Query  115  GAAACATCAAGCCTTGCTTCAAACCTTCCCATGTCAGAGGAAATTATGACATGCACCGATTACATCCCTCGCTC  188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAACATCAAGCCTTGCTTCAAACCTTCCCATGTCAGAGGAAATTATGACATGCACCGATTACATCCCTCGCTC  370

Query  189  ATCCAATGATTATACCTCACAAATGTATTCTGCAAAACCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAAA  262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATCCAATGATTATACCTCACAAATGTATTCTGCAAAACCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAAA  444

Query  263  CTGCTTACCCTGGACAGACTCAATACCAGACACTACAGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACC  336
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGCTTACCCTGGACAGACTCAATACCAGACACTACAGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACC  518

Query  337  CAAACGTATGGACTACCTCCTTTT--------------------------------------------------  360
            ||||||||||||||||||||||||                                                  
Sbjct  519  CAAACGTATGGACTACCTCCTTTTGGTGCATTGTGGCCAGGTATGAAACCTGAAAGTGGTTTAATTCAGACTCC  592

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  593  ATCTCCAAGTCAACACAGTGTTCTTACCTGCACTACAGGGTTAACCACAAGCCAGCCAAGCCCAGCACATTATT  666

Query  361  --------------GCTTCAAGCACAAATGCCAGCCTGATATCTACTTCTTCTACAATTGCCAATATTCCAGCA  420
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTATCCCATTCAAGCTTCAAGCACAAATGCCAGCCTGATATCTACTTCTTCTACAATTGCCAATATTCCAGCA  740

Query  421  GCAGCAGTAGCCAGCATCTCAAACCAGGATTATCCCACCTATACTATTCTTGGTCAGAATCAGTACCAGGCCTG  494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCAGCAGTAGCCAGCATCTCAAACCAGGATTATCCCACCTATACTATTCTTGGTCAGAATCAGTACCAGGCCTG  814

Query  495  CTACCCCAGCTCCAGCTTTGGAGTCACAGGTCAGACTAACAGTGATGCAGAGAGCACCACATTAGCAGCAACCA  568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTACCCCAGCTCCAGCTTTGGAGTCACAGGTCAGACTAACAGTGATGCAGAGAGCACCACATTAGCAGCAACCA  888

Query  569  CATACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCT  642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CATACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCT  962

Query  643  ACAAGTCCATCTTTGTCCCAGACTACACCAAGTAAAGATACTGATGATCAGTCCAGGAAAAACATGACTAGCAA  716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACAAGTCCATCTTTGTCCCAGACTACACCAAGTAAAGATACTGATGATCAGTCCAGGAAAAACATGACTAGCAA  1036

Query  717  GAACCGGGGCAAGAGGAAAGCTGATGCCACTTCTTCCCAAGACAGTGAATTAGAACGGGTATTTCTGTGGGACT  790
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GAACCGGGGCAAGAGGAAAGCTGATGCCACTTCTTCCCAAGACAGTGAATTAGAACGGGTATTTCTGTGGGACT  1110

Query  791  TGGATGAAACCATCATCATCTTCCACTCACTTCTTACTGGATCCTATGCCCAGAAATATGGAAAGGACCCAACA  864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGGATGAAACCATCATCATCTTCCACTCACTTCTTACTGGATCCTATGCCCAGAAATATGGAAAGGACCCAACA  1184

Query  865  GTAGTGATTGGCTCAGGTTTAACAATGGAAGAAATGATTTTTGAAGTGGCTGATACTCATCTATTTTTCAATGA  938
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GTAGTGATTGGCTCAGGTTTAACAATGGAAGAAATGATTTTTGAAGTGGCTGATACTCATCTATTTTTCAATGA  1258

Query  939  CTTAG--------------------------------------------------------------------A  944
            |||||                                                                    |
Sbjct 1259  CTTAGAGACATAGTCCTCACTCAGGAACTGAAAGTTCTGTGAAGAATTTGACCTGAATGTGTTCCTGCCCCCCA  1332

Query  945  GGAGTGTGACCAGGTACATGTGGAAGATGTGGCTTCTGATGACAATGGCCAAGACTTGAGCAACTACAGTTTCT  1018
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGAGTGTGACCAGGTACATGTGGAAGATGTGGCTTCTGATGACAATGGCCAAGACTTGAGCAACTACAGTTTCT  1406

Query 1019  CAACAGATGGTTTCAGTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTCAGGGAGGTGTGGAC  1092
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CAACAGATGGTTTCAGTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTCAGGGAGGTGTGGAC  1480

Query 1093  TGGATGAGGAAACTAGCTTTCCGCTACCGGAAAGTGAGAGAAATCTATGATAAGCATAAAAGCAACGTGGGTGG  1166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TGGATGAGGAAACTAGCTTTCCGCTACCGGAAAGTGAGAGAAATCTATGATAAGCATAAAAGCAACGTGGGTGG  1554

Query 1167  TCTCCTCAGTCCCCAGAGGAAGGAAGCACTGCAGAGATTAAGAGCAGAAATTGAAGTTTTAACAGATTCCTGGT  1240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCTCCTCAGTCCCCAGAGGAAGGAAGCACTGCAGAGATTAAGAGCAGAAATTGAAGTTTTAACAGATTCCTGGT  1628

Query 1241  TAGGAACTGCATTAAAGTCCTTACTTCTCATCCAGTCCAGAAAGAATTGTGTGAATGTTCTGATCACTACCACC  1314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TAGGAACTGCATTAAAGTCCTTACTTCTCATCCAGTCCAGAAAGAATTGTGTGAATGTTCTGATCACTACCACC  1702

Query 1315  CAGCTGGTTCCAGCCCTGGCCAAGGTTCTCCTATATGGACTAGGAGAAATATTTCCTATTGAGAACATCTATAG  1388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CAGCTGGTTCCAGCCCTGGCCAAGGTTCTCCTATATGGACTAGGAGAAATATTTCCTATTGAGAACATCTATAG  1776

Query 1389  TGCTACCAAAATTGGTAAGGAGAGCTGCTTTGAGAGAATTGTGTCAAGGTTTGGAAAGAAAGTCACATATGTAG  1462
            |||||||||||||||||.|    |.|.||.||      .|||.||    ||          |||||        
Sbjct 1777  TGCTACCAAAATTGGTATG----GTTTCTATG------CTGTTTC----TT----------GTCAC--------  1818

Query 1463  TGATTGGAGATGGACGAGATGAAGAAATTGCAGCCAAACAGCAACTCTATTTCTTAGACATGGAGGCATTGGGT  1536
                      |||.|            |||||...||||          ||||                     
Sbjct 1819  ----------TGGCC------------TTGCAATAAAAC----------TTTC---------------------  1839

Query 1537  TGCCAGCTAGAACCAACTGCCCTGATACTCTTCATCCAGTTAAGTGGAAACCTTAGCAACTATAATAAACTA  1608
                                     |||||.|.||.||   ||    |||       ||..|.||.|||   
Sbjct 1840  -------------------------TACTCATGATGCA---AA----AAA-------AAAAAAAAAAAA---  1869

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