Nucleotide Global Alignment

Description

Query:
TRCN0000467859
Subject:
NM_001039080.1
Aligned Length:
1233
Identities:
915
Gaps:
180

Alignment

Query    1  ATGCTGCTATCCGTGACTTCCAGGCCCGGGATTTCGACTTTTGGCTACAATAGAAACAACAAGAAGCCATATGT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GTCACTGGCTCAGCAGATGGCACCACCTAGCCCAAGCAACAGTACACCTAACAGCAGTAGTGGA----------  138
                            ||||||||.||.||.|||||.||.||.||.||.||||||||..|.|||          
Sbjct    1  ----------------ATGGCACCTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCGGCGGAGGCGGCGGCG  58

Query  139  --AGCAATGGAAATGACCAGCTGAGCAAAACCAACCTATACATCCGAGGATTGCAACCAGGCACTACTGACCAA  210
              ||...|||.||.|||||||||||||||||||||||.||.|||||||||.||||.||||||||.||||||||.
Sbjct   59  GGAGTGGTGGGAACGACCAGCTGAGCAAAACCAACCTGTATATCCGAGGACTGCAGCCAGGCACCACTGACCAG  132

Query  211  GATCTTGTCAAGCTGTGTCAGCCATATGGCAAGATTGTTTCCACTAAGGCCATACTGGACAAGACCACAAACAA  284
            ||.|||||||||||.||||||||.||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct  133  GACCTTGTCAAGCTCTGTCAGCCGTATGGCAAGATTGTCTCCACTAAGGCCATCCTGGACAAGACCACAAACAA  206

Query  285  ATGTAAAGGCTATGGCTTTGTAGATTTTGACAGCCCTTCAGCAGCACAGAAAGCTGTAACAGCACTGAAGGCCA  358
            .||.|||||||||||||||||.||.||.|||||.||.|||.|||||||||||||||||||.||||||||.||||
Sbjct  207  GTGCAAAGGCTATGGCTTTGTGGACTTCGACAGTCCGTCATCAGCACAGAAAGCTGTAACTGCACTGAAAGCCA  280

Query  359  GCGGTGTACAGGCACAGATGGCAAAGCAACAGGAACAGGACCCCACAAATTTATACATCTCAAACCTCCCACTG  432
            |.|||||.||||||||.|||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.|||
Sbjct  281  GTGGTGTGCAGGCACAAATGGCAAAGCAACAGGAGCAAGACCCTACAAACTTATACATCTCAAACCTCCCTCTG  354

Query  433  TCAATGGATGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAGGTTATCTCCACCCGTATCCTTCGAGA  506
            ||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.||.||.|||||||||||
Sbjct  355  TCAATGGACGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAGGTCATCTCTACTCGGATCCTTCGAGA  428

Query  507  TACCAGTGGGACCAGCAGAGGTGTTGGCTTTGCAAGGATGGAGTCCACAGAGAAGTGTGAAGCCATCATCACCC  580
            .||.||||||.||||||||||.||.||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct  429  CACTAGTGGGGCCAGCAGAGGGGTCGGCTTTGCAAGGATGGAGTCAACAGAGAAGTGTGAAGCCATCATCACCC  502

Query  581  ACTTTAATGGAAAATATATTAAGACACCCCCTGGAGTACCAGCCCCATCCGATCCCTTGCTTTGCAAATTTGCT  654
            |||||||||||||.|||||.||||||||||||||||||.||||.||.||.||.||.||||||||||||||||||
Sbjct  503  ACTTTAATGGAAAGTATATAAAGACACCCCCTGGAGTAGCAGCACCTTCTGACCCTTTGCTTTGCAAATTTGCT  576

Query  655  GATGGCGGGCCAAAGAAACGACAGAACCAAGGAAAATTTGTGCAAAATGGACGGGCTTGGCCAAGGAATGCAGA  728
            ||.||.|||||||||||||||||||.||||||||.||..|||||||||||||||||.|||||||||||.|.|||
Sbjct  577  GACGGTGGGCCAAAGAAACGACAGAGCCAAGGAAGATACGTGCAAAATGGACGGGCCTGGCCAAGGAACGGAGA  650

Query  729  CATGGGCGTCATGGCCTTGACCTATGACCCCACCACAGCTCTTCAGAATGGGTTTTACCCAGCCCCCTATAACA  802
            ||||||||..|||||||||||||||||||||||..|.||.||||||||||||||.|||.||||.||.||.|..|
Sbjct  651  CATGGGCGGTATGGCCTTGACCTATGACCCCACTGCTGCCCTTCAGAATGGGTTCTACGCAGCTCCTTACAGTA  724

Query  803  TCACCCCCAACAGGATGCTTGCTCAGTCTGCACTCTCCCCATACCTTTCCTCTCCTGTGTCTTCGTATCAGAGA  876
            ||.|||.||.|||||||||||||||.|||||.||..||||.||.|||.|.||||||||||||||.||||||   
Sbjct  725  TCGCCCACAGCAGGATGCTTGCTCAATCTGCGCTAGCCCCGTATCTTCCATCTCCTGTGTCTTCCTATCAG---  795

Query  877  GTGACTCAGACATCTCCTCTACAAGTACCTAACCCATCCTGGATGCACCACCATTCATACCTCATGCAGCCTTC  950
                                                                                      
Sbjct  796  --------------------------------------------------------------------------  795

Query  951  AGGTTCAGTTCTGACACCAGGGATGGACCATCCCATTTCTCTCCAGCCTGCCTCCATGATGGGACCCCTTACCC  1024
             ||.||||||||||||||||||||||||||.|||.|.|||||||||||||||||||||||||||||.|||||||
Sbjct  796  -GGCTCAGTTCTGACACCAGGGATGGACCACCCCCTCTCTCTCCAGCCTGCCTCCATGATGGGACCTCTTACCC  868

Query 1025  AGCAACTGGGCCATCTCTCCCTCAGCAGCACAGGCACGTATATGCCGACGGCTGCAGCTATGCAAGGAGCTTAC  1098
            ||||||||||.||.||.||.||||.|||....|||||||..||||||.|.|||||.||||||||.||.||||||
Sbjct  869  AGCAACTGGGTCACCTGTCACTCAACAGTCTGGGCACGTTCATGCCGGCAGCTGCTGCTATGCATGGGGCTTAC  942

Query 1099  ATCTCCCAGTACACCCCTGTGCCTTCTTCCAGTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACCAAGTGGC  1172
            ||||||||||||.|..||||||||||||||||||||||.|..||||||||||..|||||.|||||.|||.||||
Sbjct  943  ATCTCCCAGTACCCAGCTGTGCCTTCTTCCAGTGTTTCTGCTGAGGAGAGCAATGGCCAGCAGAATCAACTGGC  1016

Query 1173  AGTGGACGCACCCTCAGAGCATGGGGTCTATTCTTTCCAGTTCAACAAG  1221
            ||||||..|.||||||||.||.|||||||||.||||||||||||.|||.
Sbjct 1017  AGTGGAGCCCCCCTCAGACCACGGGGTCTATCCTTTCCAGTTCAGCAAA  1065

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