Nucleotide Global Alignment

Description

Query:
TRCN0000467871
Subject:
XM_006501778.1
Aligned Length:
1311
Identities:
967
Gaps:
288

Alignment

Query    1  ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGGAAGTATGTAGAGAGTTCCAGAGGGG  74
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct    1  ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGGAAGTATGTAGAGAGTTTCAAAGGGG  74

Query   75  GACTTGCTCACGGCCAGACACGGAATGTAAATTTGCACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGAG  148
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GACTTGCTCACGACCAGACACGGAATGTAAATTTGCACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGAG  148

Query  149  TAATCGCCTGCTTTGATTCATTGAAAGGCCGTTGCTCCAGGGAGAACTGCAAATATCTTCATCCACCCCCACAT  222
            ||||||||||||||||||||.|||||||.|||||||||||.||||||||||||||||||||||||||||||||.
Sbjct  149  TAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAATATCTTCATCCACCCCCACAC  222

Query  223  TTAAAAACGCAGTTGGAGATAAATGGACGCAATAACTTGATTCAGCAGAAGAACATGGCCATGTTGGCCCAGCA  296
            ||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||||||.||||||||||
Sbjct  223  TTAAAAACACAGTTAGAGATAAATGGGCGGAATAACTTGATTCAGCAGAAGAACATGGCCATGCTGGCCCAGCA  296

Query  297  AATGCAACTAGCCAATGCCATGATGCCTGGTGCCCCATTACAACCCGT--------------------------  344
            ||||||..|||||||||||||||||||.||||||||.||.||.|||||                          
Sbjct  297  AATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGAACATAATGCAACAATCATTCCAAA  370

Query  345  --------------------------------------------------------------------------  344
                                                                                      
Sbjct  371  AAAGAGGGGGGGATTGCATTTCGAGGTGGGAGGGATCCCCATATTACACCGGCAGTGATACCATTTATCAATAC  444

Query  345  -----------GCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAATGCATCAGCAGCCGCCTTTAATCCCTA  407
                       |||||||||||||||||||||||||||||||||||.||||||||||   ||||||||.||.||
Sbjct  445  TGTACAGTCGAGCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCA---GCCTTTAACCCTTA  515

Query  408  TCTGGGACCTGTTTCTCCAAGCCTGGTCCCGGCAGAGATCTTGCCGACTGCACCAATGTTGGTTACAGGGAATC  481
            .|||||.||||||||.|||||||||||.||.||||||||||||||||||||||||||||||||.||.|||||||
Sbjct  516  CCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATC  589

Query  482  CGGGTGTCCCTGTACCTGCAGCTGCTGCAGCTGCTGCACAGAAATTAATGCGAACAGACAGACTTGAGGTATGT  555
            |.||.||.||.||.||.||||||||.|||||||||||||||||.||||||||.|||||||||||.|||||.|||
Sbjct  590  CTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAGTTAATGCGGACAGACAGACTGGAGGTGTGT  663

Query  556  CGAGAGTACCAACGTGGCAATTGCAACCGAGGAGAAAATGATTGTCGGTTTGCTCATCCTGCTGACAGCACAAT  629
            |||||||||||.|||||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  664  CGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCACAAT  737

Query  630  GATTGACACCAATGACAACACAGTCACTGTGTGTATGGATTACATCAAAGGGAGATGCTCTCGGGAAAAGTGCA  703
            ||||||.|||||||||||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||||
Sbjct  738  GATTGATACCAATGACAACACAGTCACTGTCTGCATGGATTACATCAAGGGGAGATGCTCTCGGGAAAAGTGCA  811

Query  704  AATACTTTCATCCCCCTGCACATTTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCT  777
            |||||||.|||||.||.|||||..|||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  812  AATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCA  885

Query  778  GCACAGGCTGCAGCCACCGCAGCTGCCA----------------------------------------------  805
            ||||||||||||||.||.||||||||||                                              
Sbjct  886  GCACAGGCTGCAGCTACTGCAGCTGCCATGACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAAC  959

Query  806  --------TGGGAATTCCTCAAGCTGTACTTCCCCCATTACCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTG  871
                    |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  960  CTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTG  1033

Query  872  CCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAACAGCATACA  945
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1034  CCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACA  1107

Query  946  GCATTTCTCCCACCAGGCTCAATATTGTGCATGACACCCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTAC  1019
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct 1108  GCATTTCTCCCACCAGGCTCAATATTGTGCATGACACCCGCTACAAGTGTT-----------------------  1158

Query 1020  GCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACAAGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGA  1093
                                                                                    ||
Sbjct 1159  ------------------------------------------------------------------------GA  1160

Query 1094  TACCCATAATATCTGCCGAACATCTGACTAGCCACAAGTATGTTACCCAGATG  1146
            ||||||||||||||||||||||||||||                         
Sbjct 1161  TACCCATAATATCTGCCGAACATCTGAC-------------------------  1188

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