Nucleotide Global Alignment

Description

Query:
TRCN0000467879
Subject:
XR_001783747.1
Aligned Length:
3155
Identities:
1705
Gaps:
1297

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCTACATAAGGACATTGGAAGAAGGAAGATTCTCTCTCTCTTCTCCACCTGCTTGTCTTGTGGGACTGAGCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGCTAGATCCTTGAACTTCCTTTCATAGCTGCTGCTGCCCATTGTTGGGACTTGGACTACAGACTGTAAGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAACAAATCCCCTTACTATACAGAGACTACCCATAAGTTCTATGACTCTAGAGAACCCTGACTAGTACAAAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTAAGTTAACTTTTATGAATACGGTAGATGATACTACAAGTACAATAAGGAAAAAAAAAAGAAAAAAGAAAAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAGTGGGACTCTAGAGCGTCAAGTATCAAAATTAAATAGGGCGGCCAGAAAGGCTTCTCTAAGGCTAATTTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACAAACCCGAAGTAGAGTGGAGTGCAAATCTTGTAGTTTTCTTAGTAAAGAGCCATGCAAGGCAGAAAGCGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAAGCGAGAAAGTAGTCTGGTTTCTGAGGCTGAGCTAGCAATTGGAATACTGTTATCCCTAGAGGTTAGGAAGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGGCAGGTTTTGGTGTTTCATTGGCGAATGGGAAGCCAGGGGATAGCTCTGAATCTGTTCTTTTTTGTTGCCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGTCTCTGGTATCGATTTTAAATTAGGGAGGCAAAGTTAAGGGAGGGCAGCTAATGCTAGAGATCACAATTTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTTTTTTAAACTAGAAAGGACACTTTGAGTACGAATGTGGACGTCCTTGCTTTTAGTTCTAAGTGATAATCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCGCACTAACTCTTTGGACCCGAGGGAATGTGATGCCAACCGATTTCTGCTCCGGGAAATAATGCCCGAACTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACGTTGGCATCGCTCCGGGACAACCCGCGGACTAGGCTTTAGGATCCCGCGGCGCGTGCGCCCCGCGGCCGGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTTGATACCGCGGCTGCGCAGCTGAGGCCCCGCCTTCCGTAGTCACGTGCCGTAGGGACCGCAGCGTGGCGGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGTGGCGGTAGCGACGGCGGGCCGTAGGGCAACCGGAAGGTTTCCGGTTCCGGTGTAACGTTCGGGCTCCGTC  1036

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct 1037  TCAGGGGCTGAAGTTTGTGAGGTGTAGTTTTTTTGTCCCATTGGAGCTCTCATTCTCCATTTTCTCCGAAATGG  1110

Query    5  CACTGTCAAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTGAAGAGGGTCCTGGGTTTCTCA  78
            |.|||||.|||.|||||||||||||||||||.|||||||||||||||||.||||||||.||.|||||.||||||
Sbjct 1111  CGCTGTCTAAGCGGGAGCTGGATGAGCTGAAGCCATGGATAGAGAAGACGGTGAAGAGAGTGCTGGGCTTCTCA  1184

Query   79  GAGCCTACGGTGGTCACAGCAGCATTGAACTGTGTGGGGAAGGGCATGGACAAGAAGAAGGCAGCCGATCATCT  152
            |||||.||.||||||||.|||||.|||||||||||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 1185  GAGCCCACAGTGGTCACTGCAGCCTTGAACTGTGTGGGGAAGGGCATGGACAAAAAGAAGGCGGCTGATCACCT  1258

Query  153  GAAACCTTTTCTTGATGATTCTACTCTCCGATTTGTGGACAAACTGTTTGAGGCTGTGGAGGAAGGCCGAAGCT  226
            |||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 1259  GAAACCTTTTCTTGATGATTCCACTCTCCGATTTGTGGATAAGCTGTTTGAGGCTGTGGAGGAAGGCCGAAGCT  1332

Query  227  CTAGGCATTCCAAGTCTAGCAGTGACAGGAGCAGAAAACGAGAGCTAAAGGAGGTGTTTGGTGATGACTCTGAG  300
            |.||||||||||||||||||||||||||.||||||||.||||||.|||||||||||||||||||||||||||||
Sbjct 1333  CAAGGCATTCCAAGTCTAGCAGTGACAGAAGCAGAAAGCGAGAGTTAAAGGAGGTGTTTGGTGATGACTCTGAG  1406

Query  301  ATCTCTAAAGAATCATCAGGAGTAAAGAAGCGACGAATACCCCGTTTTGAGGAGGTGGAAGAAGAGCCAGAGGT  374
            |||||.||.||||||||.||.|||||||||||.||.||||||||||||||||||||.|||||.|||||||||||
Sbjct 1407  ATCTCAAAGGAATCATCGGGGGTAAAGAAGCGGCGGATACCCCGTTTTGAGGAGGTAGAAGAGGAGCCAGAGGT  1480

Query  375  GATCCCTGGGCCTCCATCAGAGAGCCCTGGCATGCTGACTAAGCTCCAGATCAAACAGATGATGGAGGCAGCAA  448
            |||||||||.|||||||||||.||||||||||||||.||.||||||||||||||||||||||||||.|||||||
Sbjct 1481  GATCCCTGGACCTCCATCAGAAAGCCCTGGCATGCTAACAAAGCTCCAGATCAAACAGATGATGGAAGCAGCAA  1554

Query  449  CACGACAAATCGAGGAGAGGAAAAAACAGCTGAGCTTCATTAGCCCCCCTACACCTCAGCCAAAGACTCCTTCT  522
            ||||||||||||||||..||||||||||||||||||||||.|||||||||.||||||||||||||||.||||||
Sbjct 1555  CACGACAAATCGAGGAACGGAAAAAACAGCTGAGCTTCATCAGCCCCCCTGCACCTCAGCCAAAGACACCTTCT  1628

Query  523  TCCTCCCAACCAGAACGACTTCCTATTGGCAACACTATTCAGCCCTCCCAGGCTGCCACTTTCATGAATGATGC  596
            ||.|||||||||||.||||||||.||.||||||||||||||||||||||||||.||.||.||.|||||.|||||
Sbjct 1629  TCTTCCCAACCAGAGCGACTTCCCATCGGCAACACTATTCAGCCCTCCCAGGCCGCTACCTTTATGAACGATGC  1702

Query  597  CATTGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTCGAATCCAAGCCCAGCTGGCACTGAAGCCAGGACTCA  670
            ||||||||||||.||||||||.||.||.||||||||.||||||||.|||||||||||..||||||||||.||.|
Sbjct 1703  CATTGAGAAGGCGAGGAAAGCTGCCGAGCTGCAAGCCCGAATCCAGGCCCAGCTGGCGTTGAAGCCAGGGCTTA  1776

Query  671  TCGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCCATGGGCATTGCTCCCCCGAAGGTGGAGTTAAAA  744
            |.|||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.||.|||||||||
Sbjct 1777  TTGGCAATGCCAACATGGTGGGCCTAGCTAATCTCCATGCCATGGGCATAGCTCCACCGAAAGTAGAGTTAAAA  1850

Query  745  GACCAAACGAAACCTACACCACTGATCCTGGATGAGCAAGGGCGCACTGTAGATGCAACAGGCAAGGAGATTGA  818
            ||||||||.||.|||||.|||.||||||||||.||||||||.||||||||.|||||.||||||||||||.|.||
Sbjct 1851  GACCAAACTAAGCCTACCCCATTGATCCTGGACGAGCAAGGCCGCACTGTGGATGCGACAGGCAAGGAGGTGGA  1924

Query  819  GCTGACACACCGCATGCCTACTCTGAAAGCCAATATTCGTGCTGTGAAGAGGGAACAATTCAAGCAACAACTAA  892
            |||.|||||.||||||||.||.|||||.||.||.|||||.|||||||||||||||||.||||||||.||.||||
Sbjct 1925  GCTCACACATCGCATGCCCACCCTGAAGGCAAACATTCGGGCTGTGAAGAGGGAACAGTTCAAGCAGCAGCTAA  1998

Query  893  AGGAAAAGCCATCAGAAGACATGGAATCCAATACCTTTTTTGACCCCCGAGTCTCCATTGCCCCTTCCCAGCGC  966
            |.|||||||||||||||||||||||.||.||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1999  AAGAAAAGCCATCAGAAGACATGGAGTCTAATACCTTTTTTGACCCCCGAGTCTCAATTGCCCCTTCCCAGCGC  2072

Query  967  CAGAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAGATTGCTCAGCGATTACGGACAAAGGCTCA  1040
            ||.|||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||
Sbjct 2073  CAAAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAAATTGCTCAACGATTACGGACAAAGGCTCA  2146

Query 1041  ACTGGAGAAGCTACAGGCAGAGATTTCACAAGCAGCTCGAAAAACAGGCATCCATACTTCGACTAGGCTTGCCC  1114
            |.||||||||||.||.|||||||||||||||||.|||.|||||||||||||.||||||||||||||.|||||||
Sbjct 2147  ATTGGAGAAGCTGCAAGCAGAGATTTCACAAGCTGCTAGAAAAACAGGCATTCATACTTCGACTAGACTTGCCC  2220

Query 1115  TCATTGCTCCTAAGAAGGAGCTAAAGGAAGGAGATATTCCTGAAATTGAGTGGTGGGACTCTTACATAATCCCC  1188
            ||||||||||.||.|||||||||||||||||.|||||.|||||.|||||||||||||||||.|||||.||.|||
Sbjct 2221  TCATTGCTCCCAAAAAGGAGCTAAAGGAAGGCGATATCCCTGAGATTGAGTGGTGGGACTCGTACATCATACCC  2294

Query 1189  AATGGCTTTGATCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTTGTTGAACATCC  1262
            ||.||||||||.||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AACGGCTTTGACCT-----AGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTTGTTGAACATCC  2363

Query 1263  AGCCCAGCTCAATCCTCCAGTTGACAATGACACACCAGTTACTCTGGGAGTATATCTTACCAAGAAGGAACAGA  1336
            |||||||||.||||||||||||||||||||.|||||||||||.||.||.|||||||||||.||||||||.||||
Sbjct 2364  AGCCCAGCTTAATCCTCCAGTTGACAATGATACACCAGTTACCCTTGGGGTATATCTTACGAAGAAGGAGCAGA  2437

Query 1337  AAAAACTTCGGAGACAAACAAGGAGGGAAGCACAGAAGGAACTACAAGAAAAAGTCAGGCTGGGCCTGATGCCT  1410
            |.|||||.|||||.||||||||.||||||||||||||.||.||||||||.|||||||||||.|||||||..|||
Sbjct 2438  AGAAACTACGGAGGCAAACAAGAAGGGAAGCACAGAAAGAGCTACAAGAGAAAGTCAGGCTAGGCCTGACACCT  2511

Query 1411  CCTCCAGAACCCAAAGTGAGAATTTCTAATTTGATGCGAGTATTAGGAACAGAAGCTGTTCAAGACCCCACGAA  1484
            ||||||||.||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||||||||.||.||
Sbjct 2512  CCTCCAGAGCCCAAAGTGAGAATCTCAAATTTAATGCGAGTATTAGGAACAGAAGCAGTTCAAGACCCTACAAA  2585

Query 1485  GGTAGAAGCCCACGTCAGAGCTCAGATGGCAAAAAGACAGAAAGCGCATGAAGAGGCCAACGCTGCCCGAAAAC  1558
            ||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 2586  GGTAGAAGCCCATGTCAGAGCTCAGATGGCAAAGAGACAGAAAGCGCATGAAGAGGCCAACGCGGCCCGAAAAC  2659

Query 1559  TCACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTACACATATCT  1632
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2660  TTACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTGCACATATCT  2733

Query 1633  GTATATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAAGCCAATGCTGGGCAACTGTACCT  1706
            ||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||
Sbjct 2734  GTGTATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAGGCCAATGCTGGGCAGCTGTACCT  2807

Query 1707  GACAGGGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGCCCCAAGGCCCAGAAGAAAT  1780
            |||||||||||||||.||||||||.||||||||||||||.||||||||||||||||||||.|||||||||||||
Sbjct 2808  GACAGGGGTGGTGGTGCTGCACAAAGATGTCAACGTGGTGGTAGTGGAAGGGGGCCCCAAAGCCCAGAAGAAAT  2881

Query 1781  TTAAGCGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAAAGGGAGATGATGATGAGGAG  1854
            ||||||||||.|||||.||||||||||||||||||||.||||||||||||||.||||||||||||||||||||.
Sbjct 2882  TTAAGCGTCTCATGCTACATCGGATAAAGTGGGATGAGCAGACATCTAACACGAAGGGAGATGATGATGAGGAA  2955

Query 1855  TCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGGAGCTT  1928
            ||||||||.                                                                 
Sbjct 2956  TCTGATGAA-----------------------------------------------------------------  2964

Query 1929  TGGAGAGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAAC  2002
                                                                                      
Sbjct 2965  --------------------------------------------------------------------------  2964

Query 2003  ACTACTGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGAT  2049
                                                           
Sbjct 2965  -----------------------------------------------  2964

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