Nucleotide Global Alignment

Description

Query:
TRCN0000467879
Subject:
XR_001783749.1
Aligned Length:
3516
Identities:
1889
Gaps:
1467

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCTACATAAGGACATTGGAAGAAGGAAGATTCTCTCTCTCTTCTCCACCTGCTTGTCTTGTGGGACTGAGCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGCTAGATCCTTGAACTTCCTTTCATAGCTGCTGCTGCCCATTGTTGGGACTTGGACTACAGACTGTAAGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAACAAATCCCCTTACTATACAGAGACTACCCATAAGTTCTATGACTCTAGAGAACCCTGACTAGTACAAAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTAAGTTAACTTTTATGAATACGGTAGATGATACTACAAGTACAATAAGGAAAAAAAAAAGAAAAAAGAAAAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAGTGGGACTCTAGAGCGTCAAGTATCAAAATTAAATAGGGCGGCCAGAAAGGCTTCTCTAAGGCTAATTTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACAAACCCGAAGTAGAGTGGAGTGCAAATCTTGTAGTTTTCTTAGTAAAGAGCCATGCAAGGCAGAAAGCGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAAGCGAGAAAGTAGTCTGGTTTCTGAGGCTGAGCTAGCAATTGGAATACTGTTATCCCTAGAGGTTAGGAAGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGGCAGGTTTTGGTGTTTCATTGGCGAATGGGAAGCCAGGGGATAGCTCTGAATCTGTTCTTTTTTGTTGCCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGTCTCTGGTATCGATTTTAAATTAGGGAGGCAAAGTTAAGGGAGGGCAGCTAATGCTAGAGATCACAATTTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTTTTTTAAACTAGAAAGGACACTTTGAGTACGAATGTGGACGTCCTTGCTTTTAGTTCTAAGTGATAATCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCGCACTAACTCTTTGGACCCGAGGGAATGTGATGCCAACCGATTTCTGCTCCGGGAAATAATGCCCGAACTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACGTTGGCATCGCTCCGGGACAACCCGCGGACTAGGCTTTAGGATCCCGCGGCGCGTGCGCCCCGCGGCCGGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTTGATACCGCGGCTGCGCAGCTGAGGCCCCGCCTTCCGTAGTCACGTGCCGTAGGGACCGCAGCGTGGCGGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGTGGCGGTAGCGACGGCGGGCCGTAGGGCAACCGGAAGGTTTCCGGTTCCGGTGTAACGTTCGGGCTCCGTC  1036

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct 1037  TCAGGGGCTGAAGTTTGTGAGGTGTAGTTTTTTTGTCCCATTGGAGCTCTCATTCTCCATTTTCTCCGAAATGG  1110

Query    5  CACTGTCAAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTGAAGAGGGTCCTGGGTTTCTCA  78
            |.|||||.|||.|||||||||||||||||||.|||||||||||||||||.||||||||.||.|||||.||||||
Sbjct 1111  CGCTGTCTAAGCGGGAGCTGGATGAGCTGAAGCCATGGATAGAGAAGACGGTGAAGAGAGTGCTGGGCTTCTCA  1184

Query   79  GAGCCTACGGTGGTCACAGCAGCATTGAACTGTGTGGGGAAGGGCATGGACAAGAAGAAGGCAGCCGATCATCT  152
            |||||.||.||||||||.|||||.|||||||||||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 1185  GAGCCCACAGTGGTCACTGCAGCCTTGAACTGTGTGGGGAAGGGCATGGACAAAAAGAAGGCGGCTGATCACCT  1258

Query  153  GAAACCTTTTCTTGATGATTCTACTCTCCGATTTGTGGACAAACTGTTTGAGGCTGTGGAGGAAGGCCGAAGCT  226
            |||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 1259  GAAACCTTTTCTTGATGATTCCACTCTCCGATTTGTGGATAAGCTGTTTGAGGCTGTGGAGGAAGGCCGAAGCT  1332

Query  227  CTAGGCATTCCAAGTCTAGCAGTGACAGGAGCAGAAAACGAGAGCTAAA-------------------------  275
            |.||||||||||||||||||||||||||.||||||||.||||||.||||                         
Sbjct 1333  CAAGGCATTCCAAGTCTAGCAGTGACAGAAGCAGAAAGCGAGAGTTAAAGGAGTTCCAGGAAGCGCTCGCCCCT  1406

Query  276  -----------------------------------------------------------------------GGA  278
                                                                                   |||
Sbjct 1407  GGCTGAGGATATGTCCTTGCAAAACACGAGCCCTCCTAGTGAAGAGGGGATGTCACCCAAAGCCTACCACCGGA  1480

Query  279  GGTGTTTGGTGATGACTCTGAGATCTCTAAAGAATCATCAGGAGTAAAGAAGCGACGAATACCCCGTTTTGAGG  352
            |||||||||||||||||||||||||||.||.||||||||.||.|||||||||||.||.||||||||||||||||
Sbjct 1481  GGTGTTTGGTGATGACTCTGAGATCTCAAAGGAATCATCGGGGGTAAAGAAGCGGCGGATACCCCGTTTTGAGG  1554

Query  353  AGGTGGAAGAAGAGCCAGAGGTGATCCCTGGGCCTCCATCAGAGAGCCCTGGCATGCTGACTAAGCTCCAGATC  426
            ||||.|||||.||||||||||||||||||||.|||||||||||.||||||||||||||.||.||||||||||||
Sbjct 1555  AGGTAGAAGAGGAGCCAGAGGTGATCCCTGGACCTCCATCAGAAAGCCCTGGCATGCTAACAAAGCTCCAGATC  1628

Query  427  AAACAGATGATGGAGGCAGCAACACGACAAATCGAGGAGAGGAAAAAACAGCTGAGCTTCATTAGCCCCCCTAC  500
            ||||||||||||||.|||||||||||||||||||||||..||||||||||||||||||||||.|||||||||.|
Sbjct 1629  AAACAGATGATGGAAGCAGCAACACGACAAATCGAGGAACGGAAAAAACAGCTGAGCTTCATCAGCCCCCCTGC  1702

Query  501  ACCTCAGCCAAAGACTCCTTCTTCCTCCCAACCAGAACGACTTCCTATTGGCAACACTATTCAGCCCTCCCAGG  574
            |||||||||||||||.||||||||.|||||||||||.||||||||.||.|||||||||||||||||||||||||
Sbjct 1703  ACCTCAGCCAAAGACACCTTCTTCTTCCCAACCAGAGCGACTTCCCATCGGCAACACTATTCAGCCCTCCCAGG  1776

Query  575  CTGCCACTTTCATGAATGATGCCATTGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTCGAATCCAAGCCCAG  648
            |.||.||.||.|||||.|||||||||||||||||.||||||||.||.||.||||||||.||||||||.||||||
Sbjct 1777  CCGCTACCTTTATGAACGATGCCATTGAGAAGGCGAGGAAAGCTGCCGAGCTGCAAGCCCGAATCCAGGCCCAG  1850

Query  649  CTGGCACTGAAGCCAGGACTCATCGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCCATGGGCATTGC  722
            |||||..||||||||||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||||.||
Sbjct 1851  CTGGCGTTGAAGCCAGGGCTTATTGGCAATGCCAACATGGTGGGCCTAGCTAATCTCCATGCCATGGGCATAGC  1924

Query  723  TCCCCCGAAGGTGGAGTTAAAAGACCAAACGAAACCTACACCACTGATCCTGGATGAGCAAGGGCGCACTGTAG  796
            |||.|||||.||.|||||||||||||||||.||.|||||.|||.||||||||||.||||||||.||||||||.|
Sbjct 1925  TCCACCGAAAGTAGAGTTAAAAGACCAAACTAAGCCTACCCCATTGATCCTGGACGAGCAAGGCCGCACTGTGG  1998

Query  797  ATGCAACAGGCAAGGAGATTGAGCTGACACACCGCATGCCTACTCTGAAAGCCAATATTCGTGCTGTGAAGAGG  870
            ||||.||||||||||||.|.|||||.|||||.||||||||.||.|||||.||.||.|||||.||||||||||||
Sbjct 1999  ATGCGACAGGCAAGGAGGTGGAGCTCACACATCGCATGCCCACCCTGAAGGCAAACATTCGGGCTGTGAAGAGG  2072

Query  871  GAACAATTCAAGCAACAACTAAAGGAAAAGCCATCAGAAGACATGGAATCCAATACCTTTTTTGACCCCCGAGT  944
            |||||.||||||||.||.|||||.|||||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct 2073  GAACAGTTCAAGCAGCAGCTAAAAGAAAAGCCATCAGAAGACATGGAGTCTAATACCTTTTTTGACCCCCGAGT  2146

Query  945  CTCCATTGCCCCTTCCCAGCGCCAGAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAGATTGCTC  1018
            |||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 2147  CTCAATTGCCCCTTCCCAGCGCCAAAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAAATTGCTC  2220

Query 1019  AGCGATTACGGACAAAGGCTCAACTGGAGAAGCTACAGGCAGAGATTTCACAAGCAGCTCGAAAAACAGGCATC  1092
            |.|||||||||||||||||||||.||||||||||.||.|||||||||||||||||.|||.|||||||||||||.
Sbjct 2221  AACGATTACGGACAAAGGCTCAATTGGAGAAGCTGCAAGCAGAGATTTCACAAGCTGCTAGAAAAACAGGCATT  2294

Query 1093  CATACTTCGACTAGGCTTGCCCTCATTGCTCCTAAGAAGGAGCTAAAGGAAGGAGATATTCCTGAAATTGAGTG  1166
            ||||||||||||||.|||||||||||||||||.||.|||||||||||||||||.|||||.|||||.||||||||
Sbjct 2295  CATACTTCGACTAGACTTGCCCTCATTGCTCCCAAAAAGGAGCTAAAGGAAGGCGATATCCCTGAGATTGAGTG  2368

Query 1167  GTGGGACTCTTACATAATCCCCAATGGCTTTGATCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAA  1240
            |||||||||.|||||.||.|||||.||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  GTGGGACTCGTACATCATACCCAACGGCTTTGACCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAA  2442

Query 1241  TCACAAATCTTGTTGAACATCCAGCCCAGCTCAATCCTCCAGTTGACAATGACACACCAGTTACTCTGGGAGTA  1314
            |||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||.||.|||
Sbjct 2443  TCACAAATCTTGTTGAACATCCAGCCCAGCTTAATCCTCCAGTTGACAATGATACACCAGTTACCCTTGGGGTA  2516

Query 1315  TATCTTACCAAGAAGGAACAGAAAAAACTTCGGAGACAAACAAGGAGGGAAGCACAGAAGGAACTACAAGAAAA  1388
            ||||||||.||||||||.|||||.|||||.|||||.||||||||.||||||||||||||.||.||||||||.||
Sbjct 2517  TATCTTACGAAGAAGGAGCAGAAGAAACTACGGAGGCAAACAAGAAGGGAAGCACAGAAAGAGCTACAAGAGAA  2590

Query 1389  AGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCTAATTTGATGCGAGTATTAGGAACAG  1462
            |||||||||.|||||||..|||||||||||.||||||||||||||.||.|||||.|||||||||||||||||||
Sbjct 2591  AGTCAGGCTAGGCCTGACACCTCCTCCAGAGCCCAAAGTGAGAATCTCAAATTTAATGCGAGTATTAGGAACAG  2664

Query 1463  AAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCACGTCAGAGCTCAGATGGCAAAAAGACAGAA----------  1526
            ||||.|||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||          
Sbjct 2665  AAGCAGTTCAAGACCCTACAAAGGTAGAAGCCCATGTCAGAGCTCAGATGGCAAAGAGACAGAACCCTGCCTCT  2738

Query 1527  ------------------------------------------------AGCGCATGAAGAGGCCAACGCTGCCC  1552
                                                            |||||||||||||||||||||.||||
Sbjct 2739  GATCGGCAATGCCTTTCTCACTTGTGGATGTCCTTCCTGTCACGACAGAGCGCATGAAGAGGCCAACGCGGCCC  2812

Query 1553  GAAAACTCACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTACAC  1626
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 2813  GAAAACTTACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTGCAC  2886

Query 1627  ATATCTGTATATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAAGCCAATGCTGGGCAACT  1700
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||
Sbjct 2887  ATATCTGTGTATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAGGCCAATGCTGGGCAGCT  2960

Query 1701  GTACCTGACAGGGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGCCCCAAGGCCCAGA  1774
            |||||||||||||||||||||.||||||||.||||||||||||||.||||||||||||||||||||.|||||||
Sbjct 2961  GTACCTGACAGGGGTGGTGGTGCTGCACAAAGATGTCAACGTGGTGGTAGTGGAAGGGGGCCCCAAAGCCCAGA  3034

Query 1775  AGAAATTTAAGCGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAAAGGGAGATGATGAT  1848
            ||||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||.|||||||||||||||
Sbjct 3035  AGAAATTTAAGCGTCTCATGCTACATCGGATAAAGTGGGATGAGCAGACATCTAACACGAAGGGAGATGATGAT  3108

Query 1849  GAGGAGTCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCG  1922
            |||||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||
Sbjct 3109  GAGGAATCTGATGAAGAAGCTGTGAAGAAAACTAACAAATGTGTACTAGTATGGGAGGGTACAGCCAAAGACCG  3182

Query 1923  GAGCTTTGGAGAGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGG  1996
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183  GAGCTTTGGAGAGATGAAGTTTAAACAGTGCCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGG  3256

Query 1997  CTGAACACTACTGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGAT---------------------  2049
            ||||||||||||||||||||||.|||||||||||||||||.||||||||.||.                     
Sbjct 3257  CTGAACACTACTGGGACCTTGCACTGAGTGAATCTGTGTTGGAGTCCACCGACTGAGACTACTGTTAGCCCTTG  3330

Query 2050  --------------------------------------------------------------------------  2049
                                                                                      
Sbjct 3331  TATCTTCTTTGCCTTTGTTTCTTCTGTCTTCTCACTCTACTTCCCAACCTTACCCCACCGTGCGTGTGATCTCA  3404

Query 2050  --------------------------------------------------------------------------  2049
                                                                                      
Sbjct 3405  GAACTGTGCCAGGCCGATACCAGGGCAAAAAGACTACCAAGTTCACCCAGTCAGCCTGGTGCTACCCTCCATCC  3478

Query 2050  --------------------------------------  2049
                                                  
Sbjct 3479  TGTATGTGCATATGATTAAAGAGTTATTTTTAAAATTA  3516

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