Nucleotide Global Alignment

Description

Query:
TRCN0000467879
Subject:
XR_002958009.1
Aligned Length:
2946
Identities:
2049
Gaps:
897

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAGGTGAGTAGTGGCCCCGGGCCCACAGAGGGTAATTCCAGTCCGCGCCACTGTGGCCGGGGACTCAGTCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGGGAGGACCGAAGCGGGAGGGTTCAGCGGGAAGGAGTGTGAAAGGAGTACCTGGTTTGGTGGGAGAAGAGGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGAATGAGATTGTTGAGAGGAAAAGGGCGGGGGCGGGAAGGAGACCGGGTTGGGAGACCAGCTCTGGGGTGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGTTTAGGTAGAACAAGGTAGAGTAAGAGACTGGTTGGAGTGACGGAGAGAGTAAAAATGAAGATTAGCGGGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGTGGGGGGCTGCAGAGGGAAACTCAGGTTGTAGCAAACAAGAGCACGGAGTAAGGAATTCCTTCTGAAGACT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGATTTGGATTCTGCTGCCTGCTCATTGAGAGGAGAGATCATTGTACCTCGCTTTCCTTCCGCACCCCCACTAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCCCGCACCTCGCAGTTATTGTTGAGCATTTGATTAGTGACAAGGCTAATTACCGTTTGAAACTTTTTTATCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTGGCTGTTTAGTTTGCACGTCATCTTATGGAGGTGTAGTATTGAGTCCTGTTTGAGCTATTGTTCTCTTTTTC  592

Query    1  -------ATGGCACTGTCAAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTGAAGAGGGTCC  67
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGAAAAATGGCACTGTCAAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTGAAGAGGGTCC  666

Query   68  TGGGTTTCTCAGAGCCTACGGTGGTCACAGCAGCATTGAACTGTGTGGGGAAGGGCATGGACAAGAAGAAGGCA  141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGGGTTTCTCAGAGCCTACGGTGGTCACAGCAGCATTGAACTGTGTGGGGAAGGGCATGGACAAGAAGAAGGCA  740

Query  142  GCCGATCATCTGAAACCTTTTCTTGATGATTCTACTCTCCGATTTGTGGACAAACTGTTTGAGGCTGTGGAGGA  215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCCGATCATCTGAAACCTTTTCTTGATGATTCTACTCTCCGATTTGTGGACAAACTGTTTGAGGCTGTGGAGGA  814

Query  216  AGGCCGAAGCTCTAGGCATTCCAAGTCTAGCAGTGACAGGAGCAGAAAACGAGAGCTAAAGGAGGTGTTTGGTG  289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGGCCGAAGCTCTAGGCATTCCAAGTCTAGCAGTGACAGGAGCAGAAAACGAGAGCTAAAGGAGGTGTTTGGTG  888

Query  290  ATGACTCTGAGATCTCTAAAGAATCATCAGGAGTAAAGAAGCGACGAATACCCCGTTTTGAGGAGGTGGAAGAA  363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATGACTCTGAGATCTCTAAAGAATCATCAGGAGTAAAGAAGCGACGAATACCCCGTTTTGAGGAGGTGGAAGAA  962

Query  364  GAGCCAGAGGTGATCCCTGGGCCTCCATCAGAGAGCCCTGGCATGCTGACTAAGCTCCAGATCAAACAGATGAT  437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAGCCAGAGGTGATCCCTGGGCCTCCATCAGAGAGCCCTGGCATGCTGACTAAGCTCCAGATCAAACAGATGAT  1036

Query  438  GGAGGCAGCAACACGACAAATCGAGGAGAGGAAAAAACAGCTGAGCTTCATTAGCCCCCCTACACCTCAGCCAA  511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGAGGCAGCAACACGACAAATCGAGGAGAGGAAAAAACAGCTGAGCTTCATTAGCCCCCCTACACCTCAGCCAA  1110

Query  512  AGACTCCTTCTTCCTCCCAACCAGAACGACTTCCTATTGGCAACACTATTCAGCCCTCCCAGGCTGCCACTTTC  585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGACTCCTTCTTCCTCCCAACCAGAACGACTTCCTATTGGCAACACTATTCAGCCCTCCCAGGCTGCCACTTTC  1184

Query  586  ATGAATGATGCCATTGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTCGAATCCAAGCCCAGCTGGCACTGAA  659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATGAATGATGCCATTGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTCGAATCCAAGCCCAGCTGGCACTGAA  1258

Query  660  GCCAGGACTCATCGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCCATGGGCATTGCTCCCCCGAAGG  733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCCAGGACTCATCGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCCATGGGCATTGCTCCCCCGAAGG  1332

Query  734  TGGAGTTAAAAGACCAAACGAAACCTACACCACTGATCCTGGATGAGCAAGGGCGCACTGTAGATGCAACAGGC  807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TGGAGTTAAAAGACCAAACGAAACCTACACCACTGATCCTGGATGAGCAAGGGCGCACTGTAGATGCAACAGGC  1406

Query  808  AAGGAGATTGAGCTGACACACCGCATGCCTACTCTGAAAGCCAATATTCGTGCTGTGAAGAGGGAACAATTCAA  881
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AAGGAGATTGAGCTGACACACCGCATGCCTACTCTGAAAGCCAATATTCGTGCTGTGAAGAGGGAACAATTCAA  1480

Query  882  GCAACAACTAAAGGAAAAGCCATCAGAAGACATGGAATCCAATACCTTTTTTGACCCCCGAGTCTCCATTGCCC  955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GCAACAACTAAAGGAAAAGCCATCAGAAGACATGGAATCCAATACCTTTTTTGACCCCCGAGTCTCCATTGCCC  1554

Query  956  CTTCCCAGCGCCAGAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAGATTGCTCAGCGATTACGG  1029
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTTCCCAGCGCCAGAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAGATTGCTCAGCGATTACGG  1628

Query 1030  ACAAAGGCTCAACTGGAGAAGCTACAGGCAGAGATTTCACAAGCAGCTCGAAAAACAGGCATCCATACTTCGAC  1103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  ACAAAGGCTCAACTGGAGAAGCTACAGGCAGAGATTTCACAAGCAGCTCGAAAAACAGGCATCCATACTTCGAC  1702

Query 1104  TAGGCTTGCCCTCATTGCTCCTAAGAAGGAGCTAAAGGAAGGAGATATTCCTGAAATTGAGTGGTGGGACTCTT  1177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TAGGCTTGCCCTCATTGCTCCTAAGAAGGAGCTAAAGGAAGGAGATATTCCTGAAATTGAGTGGTGGGACTCTT  1776

Query 1178  ACATAATCCCCAATGGCTTTGATCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTT  1251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACATAATCCCCAATGGCTTTGATCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTT  1850

Query 1252  GTTGAACATCCAGCCCAGCTCAATCCTCCAGTTGACAATGACACACCAGTTACTCTGGGAGTATATCTTACCAA  1325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GTTGAACATCCAGCCCAGCTCAATCCTCCAGTTGACAATGACACACCAGTTACTCTGGGAGTATATCTTACCAA  1924

Query 1326  GAAGGAACAGAAAAAACTTCGGAGACAAACAAGGAGGGAAGCACAGAAGGAACTACAAGAAAAAGTCAGGCTGG  1399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GAAGGAACAGAAAAAACTTCGGAGACAAACAAGGAGGGAAGCACAGAAGGAACTACAAGAAAAAGTCAGGCTGG  1998

Query 1400  GCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCTAATTTGATGCGAGTATTAGGAACAGAAGCTGTTCAA  1473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCTAATTTGATGCGAGTATTAGGAACAGAAGCTGTTCAA  2072

Query 1474  GACCCCACGAAGGTAGAAGCCCACGTCAGAGCTCAGATGGCAAAAAGACAGAA---------------------  1526
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                     
Sbjct 2073  GACCCCACGAAGGTAGAAGCCCACGTCAGAGCTCAGATGGCAAAAAGACAGAACCCTGCCTCTGATCTTCAATG  2146

Query 1527  -------------------------------------AGCGCATGAAGAGGCCAACGCTGCCCGAAAACTCACA  1563
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct 2147  CCTTTCTCACTTGTGGATGTCCTTCCTGTCACGACAGAGCGCATGAAGAGGCCAACGCTGCCCGAAAACTCACA  2220

Query 1564  GCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTACACATATCTGTATA  1637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTACACATATCTGTATA  2294

Query 1638  TAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAAGCCAATGCTGGGCAACTGTACCTGACAG  1711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  TAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAAGCCAATGCTGGGCAACTGTACCTGACAG  2368

Query 1712  GGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGCCCCAAGGCCCAGAAGAAATTTAAG  1785
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  GGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGCCCCAAGGCCCAGAAGAAATTTAAG  2442

Query 1786  CGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAAAGGGAGATGATGATGAGGAGTCTGA  1859
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  CGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAAAGGGAGATGATGATGAGGAGTCTGA  2516

Query 1860  TGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGGAGCTTTGGAG  1933
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  TGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGGAGCTTTGGAG  2590

Query 1934  AGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACACTAC  2007
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  AGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACACTAC  2664

Query 2008  TGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGAT--------------------------------  2049
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct 2665  TGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGATTGAGACTACTGCAAGCCCTTGCCTCTCCTCCC  2738

Query 2050  --------------------------------------------------------------------------  2049
                                                                                      
Sbjct 2739  TTGCCTTTGTCTCTTCAGTCCTCTCACTTATTCTATTTCCCAACCCCCTCCCACTTGTTTGTGTGATCTCAGAA  2812

Query 2050  --------------------------------------------------------------------------  2049
                                                                                      
Sbjct 2813  CTGTGCCAAGCAGACACTGGGACAAAGGGAGAATATCTTGCTCCCCTCCTGAGTCAGCCTGGTGTTGCCCTTTA  2886

Query 2050  ------------------------------------------------------------  2049
                                                                        
Sbjct 2887  TTCCCCTTATGTGCATATGATTAAAGAGTTATTTTTAAACTTGGTGTGATATTTTTCACA  2946

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