Nucleotide Global Alignment

Description

Query:
TRCN0000467879
Subject:
XR_375580.2
Aligned Length:
3372
Identities:
1889
Gaps:
1323

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCTACATAAGGACATTGGAAGAAGGAAGATTCTCTCTCTCTTCTCCACCTGCTTGTCTTGTGGGACTGAGCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGCTAGATCCTTGAACTTCCTTTCATAGCTGCTGCTGCCCATTGTTGGGACTTGGACTACAGACTGTAAGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAACAAATCCCCTTACTATACAGAGACTACCCATAAGTTCTATGACTCTAGAGAACCCTGACTAGTACAAAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTAAGTTAACTTTTATGAATACGGTAGATGATACTACAAGTACAATAAGGAAAAAAAAAAGAAAAAAGAAAAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAGTGGGACTCTAGAGCGTCAAGTATCAAAATTAAATAGGGCGGCCAGAAAGGCTTCTCTAAGGCTAATTTGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACAAACCCGAAGTAGAGTGGAGTGCAAATCTTGTAGTTTTCTTAGTAAAGAGCCATGCAAGGCAGAAAGCGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CAAGCGAGAAAGTAGTCTGGTTTCTGAGGCTGAGCTAGCAATTGGAATACTGTTATCCCTAGAGGTTAGGAAGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAGGCAGGTTTTGGTGTTTCATTGGCGAATGGGAAGCCAGGGGATAGCTCTGAATCTGTTCTTTTTTGTTGCCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGTCTCTGGTATCGATTTTAAATTAGGGAGGCAAAGTTAAGGGAGGGCAGCTAATGCTAGAGATCACAATTTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTTTTTTAAACTAGAAAGGACACTTTGAGTACGAATGTGGACGTCCTTGCTTTTAGTTCTAAGTGATAATCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGCGCACTAACTCTTTGGACCCGAGGGAATGTGATGCCAACCGATTTCTGCTCCGGGAAATAATGCCCGAACTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACGTTGGCATCGCTCCGGGACAACCCGCGGACTAGGCTTTAGGATCCCGCGGCGCGTGCGCCCCGCGGCCGGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTTGATACCGCGGCTGCGCAGCTGAGGCCCCGCCTTCCGTAGTCACGTGCCGTAGGGACCGCAGCGTGGCGGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGTGGCGGTAGCGACGGCGGGCCGTAGGGCAACCGGAAGGTTTCCGGTTCCGGTGTAACGTTCGGGCTCCGTC  1036

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct 1037  TCAGGGGCTGAAGTTTGTGAGGTGTAGTTTTTTTGTCCCATTGGAGCTCTCATTCTCCATTTTCTCCGAAATGG  1110

Query    5  CACTGTCAAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTGAAGAGGGTCCTGGGTTTCTCA  78
            |.|||||.|||.|||||||||||||||||||.|||||||||||||||||.||||||||.||.|||||.||||||
Sbjct 1111  CGCTGTCTAAGCGGGAGCTGGATGAGCTGAAGCCATGGATAGAGAAGACGGTGAAGAGAGTGCTGGGCTTCTCA  1184

Query   79  GAGCCTACGGTGGTCACAGCAGCATTGAACTGTGTGGGGAAGGGCATGGACAAGAAGAAGGCAGCCGATCATCT  152
            |||||.||.||||||||.|||||.|||||||||||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 1185  GAGCCCACAGTGGTCACTGCAGCCTTGAACTGTGTGGGGAAGGGCATGGACAAAAAGAAGGCGGCTGATCACCT  1258

Query  153  GAAACCTTTTCTTGATGATTCTACTCTCCGATTTGTGGACAAACTGTTTGAGGCTGTGGAGGAAGGCCGAAGCT  226
            |||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||||||||||||||||
Sbjct 1259  GAAACCTTTTCTTGATGATTCCACTCTCCGATTTGTGGATAAGCTGTTTGAGGCTGTGGAGGAAGGCCGAAGCT  1332

Query  227  CTAGGCATTCCAAGTCTAGCAGTGACAGGAGCAGAAAACGAGAGCTAAAGGAGGTGTTTGGTGATGACTCTGAG  300
            |.||||||||||||||||||||||||||.||||||||.||||||.|||||||||||||||||||||||||||||
Sbjct 1333  CAAGGCATTCCAAGTCTAGCAGTGACAGAAGCAGAAAGCGAGAGTTAAAGGAGGTGTTTGGTGATGACTCTGAG  1406

Query  301  ATCTCTAAAGAATCATCAGGAGTAAAGAAGCGACGAATACCCCGTTTTGAGGAGGTGGAAGAAGAGCCAGAGGT  374
            |||||.||.||||||||.||.|||||||||||.||.||||||||||||||||||||.|||||.|||||||||||
Sbjct 1407  ATCTCAAAGGAATCATCGGGGGTAAAGAAGCGGCGGATACCCCGTTTTGAGGAGGTAGAAGAGGAGCCAGAGGT  1480

Query  375  GATCCCTGGGCCTCCATCAGAGAGCCCTGGCATGCTGACTAAGCTCCAGATCAAACAGATGATGGAGGCAGCAA  448
            |||||||||.|||||||||||.||||||||||||||.||.||||||||||||||||||||||||||.|||||||
Sbjct 1481  GATCCCTGGACCTCCATCAGAAAGCCCTGGCATGCTAACAAAGCTCCAGATCAAACAGATGATGGAAGCAGCAA  1554

Query  449  CACGACAAATCGAGGAGAGGAAAAAACAGCTGAGCTTCATTAGCCCCCCTACACCTCAGCCAAAGACTCCTTCT  522
            ||||||||||||||||..||||||||||||||||||||||.|||||||||.||||||||||||||||.||||||
Sbjct 1555  CACGACAAATCGAGGAACGGAAAAAACAGCTGAGCTTCATCAGCCCCCCTGCACCTCAGCCAAAGACACCTTCT  1628

Query  523  TCCTCCCAACCAGAACGACTTCCTATTGGCAACACTATTCAGCCCTCCCAGGCTGCCACTTTCATGAATGATGC  596
            ||.|||||||||||.||||||||.||.||||||||||||||||||||||||||.||.||.||.|||||.|||||
Sbjct 1629  TCTTCCCAACCAGAGCGACTTCCCATCGGCAACACTATTCAGCCCTCCCAGGCCGCTACCTTTATGAACGATGC  1702

Query  597  CATTGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTCGAATCCAAGCCCAGCTGGCACTGAAGCCAGGACTCA  670
            ||||||||||||.||||||||.||.||.||||||||.||||||||.|||||||||||..||||||||||.||.|
Sbjct 1703  CATTGAGAAGGCGAGGAAAGCTGCCGAGCTGCAAGCCCGAATCCAGGCCCAGCTGGCGTTGAAGCCAGGGCTTA  1776

Query  671  TCGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCCATGGGCATTGCTCCCCCGAAGGTGGAGTTAAAA  744
            |.|||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.||.|||||||||
Sbjct 1777  TTGGCAATGCCAACATGGTGGGCCTAGCTAATCTCCATGCCATGGGCATAGCTCCACCGAAAGTAGAGTTAAAA  1850

Query  745  GACCAAACGAAACCTACACCACTGATCCTGGATGAGCAAGGGCGCACTGTAGATGCAACAGGCAAGGAGATTGA  818
            ||||||||.||.|||||.|||.||||||||||.||||||||.||||||||.|||||.||||||||||||.|.||
Sbjct 1851  GACCAAACTAAGCCTACCCCATTGATCCTGGACGAGCAAGGCCGCACTGTGGATGCGACAGGCAAGGAGGTGGA  1924

Query  819  GCTGACACACCGCATGCCTACTCTGAAAGCCAATATTCGTGCTGTGAAGAGGGAACAATTCAAGCAACAACTAA  892
            |||.|||||.||||||||.||.|||||.||.||.|||||.|||||||||||||||||.||||||||.||.||||
Sbjct 1925  GCTCACACATCGCATGCCCACCCTGAAGGCAAACATTCGGGCTGTGAAGAGGGAACAGTTCAAGCAGCAGCTAA  1998

Query  893  AGGAAAAGCCATCAGAAGACATGGAATCCAATACCTTTTTTGACCCCCGAGTCTCCATTGCCCCTTCCCAGCGC  966
            |.|||||||||||||||||||||||.||.||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1999  AAGAAAAGCCATCAGAAGACATGGAGTCTAATACCTTTTTTGACCCCCGAGTCTCAATTGCCCCTTCCCAGCGC  2072

Query  967  CAGAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAGATTGCTCAGCGATTACGGACAAAGGCTCA  1040
            ||.|||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||
Sbjct 2073  CAAAGACGCACTTTTAAATTCCATGACAAGGGCAAATTTGAGAAAATTGCTCAACGATTACGGACAAAGGCTCA  2146

Query 1041  ACTGGAGAAGCTACAGGCAGAGATTTCACAAGCAGCTCGAAAAACAGGCATCCATACTTCGACTAGGCTTGCCC  1114
            |.||||||||||.||.|||||||||||||||||.|||.|||||||||||||.||||||||||||||.|||||||
Sbjct 2147  ATTGGAGAAGCTGCAAGCAGAGATTTCACAAGCTGCTAGAAAAACAGGCATTCATACTTCGACTAGACTTGCCC  2220

Query 1115  TCATTGCTCCTAAGAAGGAGCTAAAGGAAGGAGATATTCCTGAAATTGAGTGGTGGGACTCTTACATAATCCCC  1188
            ||||||||||.||.|||||||||||||||||.|||||.|||||.|||||||||||||||||.|||||.||.|||
Sbjct 2221  TCATTGCTCCCAAAAAGGAGCTAAAGGAAGGCGATATCCCTGAGATTGAGTGGTGGGACTCGTACATCATACCC  2294

Query 1189  AATGGCTTTGATCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTTGTTGAACATCC  1262
            ||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AACGGCTTTGACCTTACAGAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACAAATCTTGTTGAACATCC  2368

Query 1263  AGCCCAGCTCAATCCTCCAGTTGACAATGACACACCAGTTACTCTGGGAGTATATCTTACCAAGAAGGAACAGA  1336
            |||||||||.||||||||||||||||||||.|||||||||||.||.||.|||||||||||.||||||||.||||
Sbjct 2369  AGCCCAGCTTAATCCTCCAGTTGACAATGATACACCAGTTACCCTTGGGGTATATCTTACGAAGAAGGAGCAGA  2442

Query 1337  AAAAACTTCGGAGACAAACAAGGAGGGAAGCACAGAAGGAACTACAAGAAAAAGTCAGGCTGGGCCTGATGCCT  1410
            |.|||||.|||||.||||||||.||||||||||||||.||.||||||||.|||||||||||.|||||||..|||
Sbjct 2443  AGAAACTACGGAGGCAAACAAGAAGGGAAGCACAGAAAGAGCTACAAGAGAAAGTCAGGCTAGGCCTGACACCT  2516

Query 1411  CCTCCAGAACCCAAAGTGAGAATTTCTAATTTGATGCGAGTATTAGGAACAGAAGCTGTTCAAGACCCCACGAA  1484
            ||||||||.||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||||||||.||.||
Sbjct 2517  CCTCCAGAGCCCAAAGTGAGAATCTCAAATTTAATGCGAGTATTAGGAACAGAAGCAGTTCAAGACCCTACAAA  2590

Query 1485  GGTAGAAGCCCACGTCAGAGCTCAGATGGCAAAAAGACAGAAAGCGCATGAAGAGGCCAACGCTGCCCGAAAAC  1558
            ||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 2591  GGTAGAAGCCCATGTCAGAGCTCAGATGGCAAAGAGACAGAAAGCGCATGAAGAGGCCAACGCGGCCCGAAAAC  2664

Query 1559  TCACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTACACATATCT  1632
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2665  TTACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTGCACATATCT  2738

Query 1633  GTATATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAAGCCAATGCTGGGCAACTGTACCT  1706
            ||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||
Sbjct 2739  GTGTATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAGGCCAATGCTGGGCAGCTGTACCT  2812

Query 1707  GACAGGGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGCCCCAAGGCCCAGAAGAAAT  1780
            |||||||||||||||.||||||||.||||||||||||||.||||||||||||||||||||.|||||||||||||
Sbjct 2813  GACAGGGGTGGTGGTGCTGCACAAAGATGTCAACGTGGTGGTAGTGGAAGGGGGCCCCAAAGCCCAGAAGAAAT  2886

Query 1781  TTAAGCGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAAAGGGAGAT----------GA  1844
            ||||||||||.|||||.||||||||||||||||||||.||||||||||||||.|||||||||          ||
Sbjct 2887  TTAAGCGTCTCATGCTACATCGGATAAAGTGGGATGAGCAGACATCTAACACGAAGGGAGATGGTGAATTGGGA  2960

Query 1845  TGATGAGGAGTCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAG  1918
            |||||||||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||
Sbjct 2961  TGATGAGGAATCTGATGAAGAAGCTGTGAAGAAAACTAACAAATGTGTACTAGTATGGGAGGGTACAGCCAAAG  3034

Query 1919  ACCGGAGCTTTGGAGAGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCAT  1992
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 3035  ACCGGAGCTTTGGAGAGATGAAGTTTAAACAGTGCCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCAT  3108

Query 1993  GGGGCTGAACACTACTGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGAT-----------------  2049
            ||||||||||||||||||||||||||.|||||||||||||||||.||||||||.||.                 
Sbjct 3109  GGGGCTGAACACTACTGGGACCTTGCACTGAGTGAATCTGTGTTGGAGTCCACCGACTGAGACTACTGTTAGCC  3182

Query 2050  --------------------------------------------------------------------------  2049
                                                                                      
Sbjct 3183  CTTGTATCTTCTTTGCCTTTGTTTCTTCTGTCTTCTCACTCTACTTCCCAACCTTACCCCACCGTGCGTGTGAT  3256

Query 2050  --------------------------------------------------------------------------  2049
                                                                                      
Sbjct 3257  CTCAGAACTGTGCCAGGCCGATACCAGGGCAAAAAGACTACCAAGTTCACCCAGTCAGCCTGGTGCTACCCTCC  3330

Query 2050  ------------------------------------------  2049
                                                      
Sbjct 3331  ATCCTGTATGTGCATATGATTAAAGAGTTATTTTTAAAATTA  3372

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