Nucleotide Global Alignment

Description

Query:
TRCN0000468126
Subject:
NM_001184901.1
Aligned Length:
1611
Identities:
1009
Gaps:
600

Alignment

Query    1  ATGGAAAAAAAGGAGTGTCCAGAAAAGAGTAGCAGCAGTGAGGAAGAGCTGCCGAGACGGGACAGTGGATCCAG  74
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct    1  ATGGAAAAAAAGGAGTGTCCAGAAAAGAGTAGCAGCAGTGAGGAAGAGCTGCCGAGACG---------------  59

Query   75  TAGGAACATAGATGCATCCAAACTCATTAGACTACAAGGATCACGGAAACTGTTGGTTGACAATAGCATACGGG  148
                                                                                      
Sbjct   60  --------------------------------------------------------------------------  59

Query  149  AACTGCAATACACAAAAACTGGAATTTTTTTTCAGGCTGAGGCCTGTGTGACAAATGATACGGTATACAGGGAG  222
                                                                         |||||||||||||
Sbjct   60  -------------------------------------------------------------GGTATACAGGGAG  72

Query  223  CTACCCTGTGTTTCTGAGACCCTCTGTGACATCTCACATTTTTTCCAAGAAGATGATGAGACAGAGGCAGAGCC  296
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   73  CTACCCTGTGTTTCTGAGACCCTTTGTGACATCTCACATTTTTTCCAAGAAGATGATGAGACAGAGGCAGAGCC  146

Query  297  ATTATTGTTCCGTGCTGTTCCTGAGTGTCAACTATCTGGGGGGGACATTCCCAGTGTATCAGAAGAGCAGGAAT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  147  ATTATTGTTCCGTGCTGTTCCTGAGTGTCAACTATCTGGGGGGGACATTCCCAGTGTATCAGAAGAGCAGGAAT  220

Query  371  CTTCAGAGGGACAAGATTCAGGAGACATTTGCTCAGAAGAGAATCAAATAGTTTCCTCTTATGCTTCTAAAGTC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  221  CTTCAGAGGGACAAGATTCAGGAGACATTTGCTCAGAAGAGAATCAAATAGTTTCCTCTTATGCTTCTAAAGTC  294

Query  445  TGTTTTGAGATCGAAGAAGATTATAAAAATCGTCAGTTTCTGGGGCCTGAAGGAAATGTGGATGTTGAGTTGAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  295  TGTTTTGAGATCGAAGAAGATTATAAAAATCGTCAGTTTCTGGGGCCTGAAGGAAATGTGGATGTTGAGTTGAT  368

Query  519  TGATAAGAGCACAAACAGATACAGCGTTTGGTTCCCCACTGCTGGCTGGTATCTGTGGTCAGCCACAGGCCTCG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  369  TGATAAGAGCACAAACAGATACAGCGTTTGGTTCCCCACTGCTGGCTGGTATCTGTGGTCAGCCACAGGCCTCG  442

Query  593  GCTTCCTGGTAAGGGATGAGGTCACAGTGACGATTGCGTTTGGTTCCTGGAGTCAGCACCTGGCCCTGGACCTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  443  GCTTCCTGGTAAGGGATGAGGTCACAGTGACGATTGCGTTTGGTTCCTGGAGTCAGCACCTGGCCCTGGACCTG  516

Query  667  CAGCACCATGAACAGTGGCTGGTGGGCGGCCCCTTGTTTGATGTCACTGCAGAGCCAGAGGAGGCTGTCGCCGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  517  CAGCACCATGAACAGTGGCTGGTGGGCGGCCCCTTGTTTGATGTCACTGCAGAGCCAGAGGAGGCTGTCGCCGA  590

Query  741  AATCCACCTCCCCCACTCCATCTCCCTCCAAGCAGGTGAGGTGGACGTCTCCTGGTTTCTCGTTGCCCATTTTA  814
            |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  591  AATCCACCTCCCCCACTTCATCTCCCTCCAAGCAGGTGAGGTGGACGTCTCCTGGTTTCTCGTTGCCCATTTTA  664

Query  815  AGAATGAAGGGATGGTCCTGGAGCATCCAGCCCGGGTGGAGCCTTTCTATGCTGTCCTGGAAAGCCCCAGCTTC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  665  AGAATGAAGGGATGGTCCTGGAGCATCCAGCCCGGGTGGAGCCTTTCTATGCTGTCCTGGAAAGCCCCAGCTTC  738

Query  889  TCTCTGATGGGCATCCTGCTGCGGATCGCCAGTGGGACTCGCCTCTCCATCCCCATCACTTCCAACACATTGAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  739  TCTCTGATGGGCATCCTGCTGCGGATCGCCAGTGGGACTCGCCTCTCCATCCCCATCACTTCCAACACATTGAT  812

Query  963  CTATTATCACCCCCACCCCGAAGATATTAAGTTCCACTTGTACCTTGTCCCCAGCGACGCCTTGCTAACAAAGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  813  CTATTATCACCCCCACCCCGAAGATATTAAGTTCCACTTGTACCTTGTCCCCAGCGACGCCTTGCTAACAAAGG  886

Query 1037  CGATAGATGATGAGGAAGATCGCTTCCATGGTGTGCGCCTGCAGACTTCGCCCCCAATGGAACCCCTGAACTTT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  887  CGATAGATGATGAGGAAGATCGCTTCCATGGTGTGCGCCTGCAGACTTCGCCCCCAATGGAACCCCTGAACTTT  960

Query 1111  GGTTCCAGTTATATTGTGTCTAATTCTGCTAACCTGAAAGTAATGCCCAAG-----------------------  1161
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct  961  GGTTCCAGTTATATTGTGTCTAATTCTGCTAACCTGAAAGTAATGCCCAAGGAGTTGAAATTGTCCTACAGGAG  1034

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1035  CCCTGGAGAAATTCAGCACTTCTCAAAATTCTATGCTGGGCAGATGAAGGAACCCATTCAACTTGAGATTACTG  1108

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1109  AAAAAAGACATGGGACTTTGGTGTGGGATACTGAGGTGAAGCCAGTGGATCTCCAGCTTGTAGCTGCATCAGCC  1182

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1183  CCTCCTCCTTTCTCAGGTGCAGCCTTTGTGAAGGAGAACCACCGGCAACTCCAAGCCAGGATGGGGGACCTGAA  1256

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1257  AGGGGTGCTCGATGATCTCCAAGACAATGAGGTTCTTACTGAGAATGAGAAGGAGCTGGTGGAGCAGGAAAAGA  1330

Query 1162  --------------------------------------------------------------------------  1161
                                                                                      
Sbjct 1331  CACGGCAGAGCAAGAATGAGGCCTTGCTGAGCATGGTGGAGAAGAAAGGGGACCTGGCCCTGGACGTGCTCTTC  1404

Query 1162  ---------------------------------------------------------  1161
                                                                     
Sbjct 1405  AGAAGCATTAGTGAAAGGGACCCTTACCTCGTGTCCTATCTTAGACAGCAGAATTTG  1461

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