Nucleotide Global Alignment

Description

Query:
TRCN0000468214
Subject:
XR_002958314.1
Aligned Length:
4426
Identities:
434
Gaps:
3936

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGTGAAGGTCACGTCGCCATGATATCTCTTCCAAATGCTTGATGAAAAAGGTGGAAGGGTCACTTGACCCAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGTTGAAGGCTGCAGTGAGCCCTGTTTTTGCCACCACACTCCAGCCTGGGATTGATTTCTAAAGACTCATGTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACGTGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGTCAGGCATGGCTCTTCCTCAGGGACGCTTGACTTTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGATGTGGCTATAGAATTCTCATTGGCAGAGTGGAAATTCCTGAACCCTGCACAGAGGGCTTTGTACAGGGAA  296

Query    1  ------------------------------------------------------ATGATGAAGGAGTTCTCATC  20
                                                                  ||||||||||||.|||..||
Sbjct  297  GTGATGTTGGAGAACTACAGGAACCTGGAGGCTGTGGATATCTCTTCCAAACACATGATGAAGGAGGTCTTGTC  370

Query   21  CACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAGAGATT  94
            .||||.|||||||||||.||||||||||||||||||||||||||||||||||.|||||.||||||||.||||.|
Sbjct  371  AACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTGCAAAGACATCAAAGTTATCACATTGGAGACT  444

Query   95  TTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATGGTCAC  168
            |||||||||||||||||||||||||.|||||||||.|||||||||||||.||||||||.|||||.|||||.||.
Sbjct  445  TTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTTTCAGTGTCAAGAAGATGAAAGAAATGGCCAT  518

Query  169  GAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGCTGGAAACAA  242
            ||||||||||.||||.||||.|||.|||||||||||||.|||||||.|||||||||.|||||||||||||||||
Sbjct  519  GAAGCACCCACGACAAAAATAAAAAAGTTGACTGGTAGCACAGACCAACATGATCACAGGCATGCTGGAAACAA  592

Query  243  GCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGAATGG-  315
            ||||||||||||||||||||||||.||||||.||||.||||||||||||||||||||||||||| .|.||.|| 
Sbjct  593  GCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCTGCCTGAACTCCACATATTTCAG-ATCAAAGGT  665

Query  316  AAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTTGTAG  389
            .||||||.|||||||.||||||||||||.||...||||.||||.|.|||..|||||||||||||||||.|||||
Sbjct  666  GAAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGCTTCCTCAGTTTCAACATCCCAAAGAATTTCCTGTAG  739

Query  390  TCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAA  463
            .|||.|||.||.|||||||||||||||||||||||||.||||..||||||||||||.|..||||||| ..||||
Sbjct  740  GCCCCAAATCCATATTTCTAATAACTATGGGAATAATCCCCTGAATTCTTCATTACTCCCACAAAAA-CAGGAA  812

Query  464  GTACACATGAGAGAAAAATCTTTCCAATG---------------------------------------------  492
            |||||||||||||||||||||||||.|||                                             
Sbjct  813  GTACACATGAGAGAAAAATCTTTCCCATGTAATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTCTTAAGGAA  886

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  887  ACACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATGTATGTGGCAAGCTCTTTAATCACAAGCAAT  960

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  961  ACCTTGCATGCCATCGTAGATGTCACACTGGAGAGAAACCTTACAAGTGTAAAGAGTGTGGAAAGTCCTTCAGT  1034

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1035  TACAAGTCATCCCTTACATGCCATCATAGACTTCATACTGGAGTAAAACCTTACAAGTGTAATGAGTGTGGCAA  1108

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1109  GGTCTTTCGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATG  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  AATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGCCATCAAAGACTTCATACTGGAGTGAAACCTTAC  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  AAATGTAAGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCTGGCAAACCATACTAGAATTCATAGTGGAGA  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  GAAAACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATCAATCAAGCCTTGCACGTCATCATATACTTC  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  ATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCAGAAATCAACCCTTGAGAGACAT  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  AAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATACAGCTTTCACGTGTAATTCACAGCT  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  GGCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAATGAGTGTCGCAAGACCTTCAGCCGCA  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  GGTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAAAACCTTACAAGTGTAATCAGTGTGGCAATACC  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  TTCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCACACTCTAGAGAAATCTTACAAATGTACGGTTTG  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  TAACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATACTAGAATTCACACTGCAAAGAAACCTTACAAGT  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  GTAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTTCACGTCATCGTAGACTTCATACTGGAGAGAAA  1922

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1923  CCTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAAATCAGCTCTTGAGTCACATAAGAGAATTCATAC  1996

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1997  TGGAGAGAAACCATACAGATGTCAGGTTTGTGACACAGCTTTCACGTGGAATTCACAGCTGGCACGACATACAA  2070

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2071  GAATTCACACTGGAGAAAAAACTTACAAGTGTAATGAGTGTGGGAAGACCTTCAGTTACAAGTCATCACTTGTA  2144

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2145  TGGCATCGTAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTTTGTGACAAGGCTTTCGTGTGTCGTTC  2218

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2219  CTATGTGGCAAAACATACTAGAATTCACAGTGGAATGAAACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCA  2292

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2293  GTAACAGGTCATCCCTTGTATGCCATCGTAGAATTCATAGTGGTGAGAAACCTTACAAGTGTAGTGAGTGCAGC  2366

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2367  AAGACGTTCAGTCAGAAGGCAACCCTTCTATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAA  2440

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2441  CGACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGAAATCTT  2514

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2515  ACAAATGTACGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGGCAAGACATATTAGAATTCACACTGCA  2588

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2589  GAGAAACCTTACAAGTGTAATGAATGTGGAAAGGCTTTTAATGAACAATCACACCTTTCACGTCATCATAGAAT  2662

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2663  TCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTCAGTCGCAAATCACACCTTAAAAGAC  2736

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2737  ATAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTAGTGACCGGTCAACA  2810

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2811  CTTATTCACCATCAGGCAATTCATGGTATAGGGAAATTTGATTAATATAATGATTGTCACAAAGTCTTCAGTAA  2884

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2885  CACTACAACAATTGCAAATCATTGGAGAATCCATGATGAAGAGAAATCTTCTGAGTGTAATAAATGTGGCATGT  2958

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2959  TTTTCAGACATTGTTCATACATTGCAGTTCATTGGCAACCTCATACTGGAGAGAAACCTTACAAATGTCATGAT  3032

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3033  TGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACAGGAGAATTCATACAGGAGAGAAACCTCACAAGT  3106

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3107  GTGATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGACATCAGAGAATCCATACTGGACAGAAA  3180

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3181  TCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACTCCTTGCAGAACATGAGAAAATTCATTT  3254

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3255  TTGAGATAACTGTTCCCAATGCAGCTTTTCAGTAAGTGGTATGCCTGGGAAACATGGTGAGACCCCCGTTTCTG  3328

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3329  CAAAAAATACAAAAATTAGCTGGGAATGATGGCACATGCCTGCAGTATCAACTACTGTGGAGTCTGCAGTGGGA  3402

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3403  GGATGGCTTGAGCCTGGGAGGTCAAGACTATAGTGAGCTGTAATCATGCTACTGCACTCCAGCATGGTTGACAG  3476

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3477  AGCAAGATGCTGTCTAAAAAAGAATACTTATTGTAAAGTTTGGGTACAGGAATAATGAAGTCATTGATAGTTTA  3550

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3551  TGAACAGGCTATGGAGTTGATGCCCAAAAGAAATAAACAGTTTGTAAATGAATAACTTATTTTGAGTTGTGACA  3624

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3625  AGACAATGTTGAAAGTGATGCATGAAGCGGCAGGCAGACCATCCACATCAGTTTTACAGAAAAAAAGTTAATCT  3698

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3699  TGTTCGTGCTGCAGTGAAGAGAACAGCAAACAGGAGAAACAATAGTCAGGAATTCAATAATAGCCTGGTTAACA  3772

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3773  TGATGAAACCCCGTCTCTACTAAAAATACAAAGATTAGCTGGGCACAGTGGTGGGCACCTGTAATCCCAGCTAC  3846

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3847  TCAAGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCGGAAGTTTCGATGAGCCGGGATCCTGCCGTTGC  3920

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3921  ACTCCAGCCTGGGCAACAAGAGCAAACCTCTGTCTAAAACAAACAAACAAAAAGGTCTAGCCCCCTCTCCTCCT  3994

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3995  TTGTCTGCCATCATGGTGTGTGCTTGACTCCACTTCTTGTCATGTCTTCTCACAAGACTTTCAGGATTAAGCGG  4068

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4069  TTTCTGGCCAACAACCAAAAGTAAAATCGTCCGATTTCCCAGTGGATTCGAATGAAAACTGGCAATAAAATCAG  4142

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4143  GTCCAACTTTAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATAAGGAATTGCACGTGAGATGGCACACA  4216

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4217  TATTTATGCTGTGTGAGCATCATAATCACGTTACTTAAGCTGAAAATGTCACTACCATCTGGAGACTTGGACAT  4290

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4291  GTTTTATTGGGAATATATTTTTTTCTCTCTGAATCTGTTATGAACGCATTGGTTGGGTGGGTTCAGTAATAAAC  4364

Query  493  ------------------------------------------------------------  492
                                                                        
Sbjct 4365  ATGTGAGACCTTTCATTTCAAAAAAAAAATTTTAATGACATAATAGATTACCTAAATTTC  4424

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