Nucleotide Global Alignment

Description

Query:
TRCN0000468927
Subject:
NM_182524.4
Aligned Length:
1949
Identities:
1231
Gaps:
520

Alignment

Query    1  ATGGAACTCTTAACATTCAAGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGTCTGGACACTTCCCA  74
            |||||||||.|||||||||.|||||||||||||||||||||.||.|||||||||||||||||||||.||.||||
Sbjct    1  ATGGAACTCGTAACATTCAGGGATGTGGCCATAGAATTCTCCCCTGAAGAGTGGAAATGTCTGGACCCTGCCCA  74

Query   75  GCAGAATTTATATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTGGGTGTTAGT-ATCTCTAAC  147
            |||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||| ||.|| |||||||||
Sbjct   75  GCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGT-TTTGTGATCTCTAAC  147

Query  148  CCAGACCTGGTCACCAGTCTGGAGCAAAGAAAAGAGCCCTACAATTTGAAGATACATGAAACAGCAGCCAGACC  221
            |||||||||||||||.||||||||||||.|||||||||||.||||||||||||||||||.||||||||||.|||
Sbjct  148  CCAGACCTGGTCACCTGTCTGGAGCAAATAAAAGAGCCCTGCAATTTGAAGATACATGAGACAGCAGCCAAACC  221

Query  222  CCCAGCTGTGTGTTCTCATTTCACCCAAAACCTTTGGACAGTGCAGGGCATAGAAGATTCATTCCACAAACTTA  295
            |||||||.|.|||||||.|||||.||||.||||||...||||||||||.|||||||||||||||||||||||||
Sbjct  222  CCCAGCTATATGTTCTCCTTTCAGCCAAGACCTTTCACCAGTGCAGGGGATAGAAGATTCATTCCACAAACTTA  295

Query  296  TACCAAAAGGACATGAGAAACGTGGACATGAGAAT------TTAAGAAAAACTTGTAAAAGTATAAATGAGTGT  363
            |||..|||.||.|.||||||.||||||||||||||      |||||||||...||||||.||.|.|||||||||
Sbjct  296  TACTGAAAAGATACGAGAAATGTGGACATGAGAATTTACAATTAAGAAAAGGCTGTAAACGTGTGAATGAGTGT  369

Query  364  AAGGTGCAGAAAGGTGGTTATAATAGAATTAACCAATGCTTATTAACTACCCAGAAAAAAACAATTCAATCTAA  437
            ||||||||||||||.|.|.|||||.||.||.||||.|||||.|.|||||||||||..||||.|.||||||.|||
Sbjct  370  AAGGTGCAGAAAGGAGTTAATAATGGAGTTTACCAGTGCTTGTCAACTACCCAGAGCAAAATATTTCAATGTAA  443

Query  438  TATATGTGTCAAAGTTTTTCATAAATTTTCAAATTCAAACAAAGATAAGATAAGATATACTGGAGATAAAACCT  511
            ||.||||||.|||||||||..||||||||||||||||||||||.|||||||||||.||||||||||.|||.|||
Sbjct  444  TACATGTGTTAAAGTTTTTAGTAAATTTTCAAATTCAAACAAACATAAGATAAGACATACTGGAGAGAAACCCT  517

Query  512  TTAAATGTAAAGAATGTGGCAAATCATTTCACGTGCTCTCACGCCTAACTCAAC--------------------  565
            |||||||||.|||||||||||.|||.|||.||.||   ||||.|||||||||||                    
Sbjct  518  TTAAATGTACAGAATGTGGCAGATCGTTTTACATG---TCACACCTAACTCAACATACAGGAATTCATGCTGGA  588

Query  566  ----------ACAAA------------------------------------------------------AGAAT  575
                      |||||                                                      |||||
Sbjct  589  GAGAAACCCTACAAATGTGAAAAATGTGGCAAAGCCTTTAATAGGTCCACATCACTTAGTAAACATAAGAGAAT  662

Query  576  TCATACTGGAGAGAACCCCTACACATGTGAAGAATGTGGCAAAGCCTTTAATTGGTCCTCAATTCTTACTAAAC  649
            |||||||||||||||.||||||||||||||||||||||||||||||||||...|||||.||.||||.|...|||
Sbjct  663  TCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCCTTTAGACGGTCCACAGTTCTGAACGAAC  736

Query  650  ATAAGAGAATTCATGCCAGAGAGAAATTCTACAAGTGTGAAGAATGTGGTAAAGGCTTTAC----TC-------  712
            ||||||.|||||||.|..||||||||..||||||.||||||||||||||.||||.||||||    ||       
Sbjct  737  ATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACAAGGTCCACAACA  810

Query  713  -------------------------------------------------------------------------G  713
                                                                                     |
Sbjct  811  CTGAATGAACACAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCCTTTAGATG  884

Query  714  GTCCTCACACCTTACTAAACATAAGAGAATTCATACTGGAGAG-------------------------------  756
            ||||.||..|||.|.|.|||||||||..|||||||||||||||                               
Sbjct  885  GTCCACAAGCCTGAATGAACATAAGAATATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAG  958

Query  757  -----------------------------------------------------AAACCCTACATATGTGAAAAA  777
                                                                 ||||||||||.||||||||||
Sbjct  959  CCTTTAGACAGTCCAGGAGCCTGAATGAACATAAAAATATTCATACTGGCGAAAAACCCTACACATGTGAAAAA  1032

Query  778  TGTGGTAAAGCTTTTAACCAATCCTCAACCCTTAATTTACATAAGAGAATTCATTCTGCACAAAAATACTACAA  851
            |||||.||||||||||||||||||||||..||||.|.||||.|.|||.||||||||||.|||||||...|||||
Sbjct 1033  TGTGGCAAAGCTTTTAACCAATCCTCAAGTCTTATTATACACAGGAGCATTCATTCTGAACAAAAACTTTACAA  1106

Query  852  ATGTGAAGAATGTGGTAAAGCCTTTAAGTGGTCCTCATCCCTTAATGAACATAAGAGAATTCATGCTGGAGAGA  925
            |||||||||||||||.||||||||||..||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1107  ATGTGAAGAATGTGGCAAAGCCTTTACTTGGTCCTCATCCCTTAATAAACATAAGAGAATTCATACTGGAGAGA  1180

Query  926  AACCCTTCTCATGCGAAGAATGTGGCAATG-TCTTTACCACATCCTCAGACTTTGCTAAACATAAGAGAATTCA  998
            ||||||.|.||||.||||||||||||||.| |.|||| .|..||||||.||.||||||||||||||||||||||
Sbjct 1181  AACCCTACACATGTGAAGAATGTGGCAAAGCTTTTTA-TAGGTCCTCACACCTTGCTAAACATAAGAGAATTCA  1253

Query  999  TACAGGAGAGAAACCCTACAAATGTGAAGAATGTGGAAAATCCTTTAATAGGTCCACAACTCTTACGACACATA  1072
            |||.||||||||||||||||..||.|||||||||||.|||.|.|||||....|||.|||||||||....|||.|
Sbjct 1254  TACTGGAGAGAAACCCTACACGTGCGAAGAATGTGGCAAAGCTTTTAACCAATCCTCAACTCTTATATTACACA  1327

Query 1073  AGAGAATCCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGAAAAGCCTTTAATTGGTCCTCAACCCTT  1146
            |||||||||||.||||..|.|||||.||||.|||||||||||||||.||||||||||...|||||.||||.||.
Sbjct 1328  AGAGAATCCATTCTGGGCAAAAACCTTACAAATGTGAAGAATGTGGCAAAGCCTTTACACGGTCCACAACACTG  1401

Query 1147  AATGTACACAAGAGAATTCACTCTGGAAAAAATCCCTACAAATGTGAAGATTGTGGCAAAGCCTTTAAAGTGTT  1220
            ||.|.|||.||||.||||||..||||..|.||.|||||||||||||||||.|||||||||||.||.|.|..||.
Sbjct 1402  AACGAACATAAGAAAATTCATACTGGCGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTCATATGGTC  1475

Query 1221  TGCAAACCTGCATAATCATAAGAAAATTCATACTGGAGAGAAACCCTACATATGTAAACAATGTGGCAAAGCCT  1294
            .||||.||||.||.|.||||||||.|||||||||||||||||||||||||.|||||||.|||||||||||||.|
Sbjct 1476  CGCAAGCCTGAATGAACATAAGAATATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTT  1549

Query 1295  TTAAACAGTCCTC------------ACA----------------------------------------------  1310
            ||||.||.|||||            |||                                              
Sbjct 1550  TTAACCAATCCTCAGGCCTTATTATACACAGGAGCATTCATTCTGAACAAAAACTTTACAAATGTGAAGAATGT  1623

Query 1311  --------------------------CTTGAATAAACATAAGAAAATTCACACTGTAGATAAACCCTACAAATG  1358
                                      |.|||||.||||||||||||||||..|||.|||.||||||||||||||
Sbjct 1624  GGCAAAGCCTTTACTCGGTCCACAGCCCTGAATGAACATAAGAAAATTCATTCTGGAGAGAAACCCTACAAATG  1697

Query 1359  TAAAGAATGCGGGAAAGCTTTTAAGCAGTACTCCAACCTTCCTCAACATAAGAGAACTCATACTGGAG-GAAA-  1430
            .||||||||.||.|||||.|.|||....|.|||.|.||||.||.||||||||||||.||||||||||| |||| 
Sbjct 1698  CAAAGAATGTGGCAAAGCCTATAACTTATCCTCAACCCTTACTAAACATAAGAGAATTCATACTGGAGAGAAAC  1771

Query 1431  -------ATTT---------------------------------------------------------------  1434
                   ||.|                                                               
Sbjct 1772  CCTTCACATGTGAAGAATGTGGCAAAGCCTTCAATTGGTCCTCATCCCTTACTAAACATAAGATAATTCATACT  1845

Query 1435  --------------------------------------------------------------------------  1434
                                                                                      
Sbjct 1846  GGAGAGAAATCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAATCGGCCCTCAACCCTTACTGTACACAAGCG  1919

Query 1435  -------------------------  1434
                                     
Sbjct 1920  AATTCATACTGGCAAGGAACATAGT  1944

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