Nucleotide Global Alignment

Description

Query:
TRCN0000469026
Subject:
NR_146906.1
Aligned Length:
3856
Identities:
1298
Gaps:
2552

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGGGCGGGAGCGGCAGACTCCGCTGCCAGCTCTACTGGCGTCCTGGCAAGGGCAGCGCCGAGGGGCGCTCCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTCCAGCTCTCCCGGCTCGGGGGTTCCTTGCCTAGGCGCCAGAGCCCCGGGCTCCCTGCCTCGGCCGCTGTGGC  148

Query    1  ----------------------------------------------------------------ATGCAGCGGC  10
                                                                            ||||||||||
Sbjct  149  CTGCATAGAGCGGCACTGCGCGCGGAGGCGATGGGAGAGAAGAAGGAGGGCGGTGGCGGGGGTGATGCAGCGGC  222

Query   11  CGCTGAGGGTGGCGCAGGGGCCCCGGCCAGCCCGGGGCTGCAGCAGTGCGGACAGCTCCAGAAGCTCATCGGCA  84
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  223  CGCTGAGGGTGGCGCAGGGGCCCCGGCCAGCCCGGGGCTGCAGCAGTGCAGACAGCTCCAGAAGCTCATCGGCA  296

Query   85  TCTCCATTGGCAGCCTGCGCGGGCTGGGCACCAAGTGCGCTGTGTCCAACGACCTCACCGAGCAGGAGATACGG  158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCTCCATTGGCAGCCTGCGCGGGCTGGGCACCAAGTGCGCTGTGTCCAACGACCTCACCGAGCAGGAGATACGG  370

Query  159  ACCCTGG-------------------------------------------------------------------  165
            |||||||                                                                   
Sbjct  371  ACCCTGGAGGCCTGTAAATTACTCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCTAGCTTATCTGGGT  444

Query  166  ----------------------AGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATG  217
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATG  518

Query  218  CGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCATGTTCAGGCAGCAAAACTGTTGGGC  291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCATGTTCAGGCAGCAAAACTGTTGGGC  592

Query  292  TCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAA  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAA  666

Query  366  ACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTTCCAGTGGCAGAAAGTGGGAAGATG  439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTTCCAGTGGCAGAAAGTGGGAAGATG  740

Query  440  ATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCAT  513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCAT  814

Query  514  GGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACC  587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACC  888

Query  588  CTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGT  661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGT  962

Query  662  CCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTG  735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTG  1036

Query  736  CTAGAGGATTCAGCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGA  809
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGA  1110

Query  810  AGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGA  883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGA  1184

Query  884  AGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCAC  957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCAC  1258

Query  958  CCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGC  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGC  1332

Query 1032  TGCTAAAACCTGTCCAACAATGCGAGCATTGTTCTCAGATCACACCGTCAGGCACTATGCCTACCTCCGAGACA  1105
            ||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||
Sbjct 1333  TGCTAAAACCTGTCCAACAATGCGAGCATTGTTC-------------TCAGGCACTATGCCTACCTCCGAGACA  1393

Query 1106  GTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATC  1179
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394  GTCTTTCTCATCTTGTTCCTGCCTTGAGGTTGCCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATC  1467

Query 1180  ATACCTCAAGAGGATCCTTCGCAGCAGTTCCTGCAGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGA  1253
            |||||||||||||||||||||||||||.||||||||||||||||||||.||||||.||||||||||||||||||
Sbjct 1468  ATACCTCAAGAGGATCCTTCGCAGCAGCTCCTGCAGCAGAGCCTTGAAGGAGTGTGTAGTCTTCAGCACTTGGA  1541

Query 1254  CCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAGGCCTTGCAGGAAAAGTCGTGGAATG----------  1317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct 1542  CCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAGGCCTTGCAGGAAAAGTCGTGGAATGTAGCTGCCCC  1615

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1616  TTCGTATTTGAAGCAGAGTGATTTGGCCTCAGCAGCAGCGAAACAGAGACCTACAAAATGGAATTCATGTAGAG  1689

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1690  TGGTGTGGAGAATAAGCAGGTGGTGATTATACATCACATGAGGCTGCAGGCCAAAGCTTTGCAACTTATAATAA  1763

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1764  CAGCACGAACTACACGAGGACTTTACCCCTTATTTGGGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTT  1837

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1838  CAGAGGTATTTCATCGCTGATTTGCCCCACTTGCAGGACAGCTTTGTGGACAAACTCCTTGACCTTATGCCCCG  1911

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1912  ATTCATGACATCCAAACCTGCAGAAGTGGTCAAAATTCTACAGACCATGCTGCGACAGAGTGCCTTTCTGCATC  1985

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1986  TCCCACTTCCAGAGCAGATCCACAAAGCCTCAGCCACCATCATTGAGCCAGCAGGCGAGTCAGACAACCCTTTG  2059

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2060  CGGTTTACCTCTGGGTTGGTGGTTGCCCTGGATGTTGATGCAACCCTGGAGCATGTGCAGGATCCTCAGAACAC  2133

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2134  TGTTAAGGTCCAGGTCCCAGAGAGCTACTCACTGCATGTGTCTTTGACCTGCTGTTGATTCATCTCCTCTGCTA  2207

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2208  AGAAGGTGGCTGATGGCTGGGCTATTTACACCTAGGAGGGTGTTCCAGGCCAGGCCCCAGGGAGCCTAAAATAA  2281

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2282  TCAAAAAGGACACATGAACCATTAACAAGAAAAATATTTAAATAAGAAACTCACCAAGCCAGGAGAATAATGAA  2355

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2356  TACCTGGATGTGCCCCCTAGGAATCTGGATCTCTTCTCTTTTCCCCACCCTGCCCTCAACTCCCCTTACATACA  2429

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2430  TACAGCCTGGATCACAAGACCCAAGAAAACCATTCCACCAGCTGCTGAGAGAAGAGCCACAAAAGGACCCAGAA  2503

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2504  CTTCTCCATGGCTACCTTAGAGCACCCTAAAATGTGCTAACAGCCATTGTTAGCATTCAGGAGCTGTTTATTCC  2577

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2578  CATTTTCACACTACACTAAAGAATTTTAAACAATCACAAGATAGACTGGCTGGAAGTTGGTGCTTGGAACATCC  2651

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2652  CACGTCACCTAAAAGCACAGTGCTGCAATCTCAGAAACCCCAGGCTCAGCCAGCAGAGAGAGGAGAAGCAGCTG  2725

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2726  GACATTGGAGACTATGATTGGACATTAGAGAGAAGGAGCTTGACTTCACAGAGAAAGCATGATGGAATAATTTC  2799

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2800  AGAGAAAAGTCTGGCCAGGGATGACCAGACTTCAGGGGAAGATAATCTTGCTCAATATCCTTTTCTGCTCCCCT  2873

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2874  TCCTGCTGAGAGTCACTTTGATTGGCAATAAAATATCTCACATTTACCATCTTCAATTTGTTCTTGCAACCTCA  2947

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2948  TTCCTCCTGGATGCCAGACAAGAACTCAGGTGCCATGAGTATGGGTGCAAAAGGCTATCACACTGTCCCTCCAC  3021

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3022  TGAGCTGTTAACACTTAAGCTATCCATGGACAGCAAAGCTAAAAGGGCACTGTAAGAGTCCTTCTGGGGTTTCA  3095

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3096  GAAGTCATGAGCATCCCCCAGATGCTGCCATGGGGCCAGTACAGAGTTTGCTCCTGCCAGAGTCCAAAAATGTC  3169

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3170  TCAGCTCCTGCACCCAGTCACCTGCATGCTCCCCCTCCCACAAGTGGTGGAGCACAGTGGGCTGAGTGAGTGGA  3243

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3244  GTTTGCCCCTGCCAGCACCCGTGCACTCCAGTTCCCACCTGTGAAGGTGTCAGAGAGATATTCTGCTTAAAAAT  3317

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3318  CAGAGTGACTCCATCTTAAATAGCAGCTGGGTGAGATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTT  3391

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3392  AGGCATTCTAACCTTCTATCAGGATGAGATAGAAGGCCAGCATAAGATATAGGTCACGAAGACTCTGCTGATAA  3465

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3466  AACAGGATGTGGTTTAAATAAATGCCAGCCAGAACCCACCAAAACCAAGATGGTGATGCTCATTCTCACTGCTC  3539

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3540  ATTATATGCCAGTATAATGCATTTGCATGCAAAAAGACTCTACCACCAGTGCCATGACAGCTTACAGATGCCAT  3613

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3614  GGCAAGATCTGGAAGTTACCCTGTAGCCTCTAAAATGGGGAAGAACCCTCAGTTCTGGAAAATTTCTGCCCCTT  3687

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3688  TCCTGAAAAACTCATGAATAATCTACCCTTTGTTTAGCATATAATCAAGAAACAACTATAAGTATAGTCAATCG  3761

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 3762  AGCAGCCAATCTCACCGCTCTGTCTATGGAGTAGTCATTCTTTTATTTACATCTCTAATAAAATTGCTTTCACT  3835

Query 1318  --------  1317
                    
Sbjct 3836  TTACTGTA  3843

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