Nucleotide Global Alignment

Description

Query:
TRCN0000469026
Subject:
XM_006507180.1
Aligned Length:
2881
Identities:
1166
Gaps:
1580

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCGCACCTGAAAAAGCGGGTGTATGAGGAGTTCACTAAAGTGGTTCAGCAGCAGCAGGAGGAAATTGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TACCAAGAAGCTCCGATTAACAAAGCCGAGCAAATCTGCCGCTCTCCACATAGATCTGTGTAAAGCCACCTCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGCAGATGCTTTGCAGTACCTACTCCAGTTTGCCAGAAAGCCTGTAGAAGCAGAGAGTGTGGAGGGGGTAGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGATTCTCTTGGAACATTATTACAAGGAAAATGATCCATCTGTGAGACTGAAAATTGCATCACTCTTGGGATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATTATCAAAGACGGCAGGATTCTCTCCAGACTGCATAATGGACGACGCCATTAACATACTACAGAATGAAAAGT  370

Query    1  ---------------------------------------------------------------ATGCAGCGGCC  11
                                                                           ||..|||..||
Sbjct  371  CTCACCAAGTGCTAGCTCAACTACTGGACACTTTGCTTGCAATTGGCAGTAAACTACCAGAAAATCAAGCTACC  444

Query   12  -----GCTGA-----GG--GTGGC--GCAGGGGCCCCGGCCAG------CCC----------------GGGGCT  49
                 || ||     ||  |||||  |||  .||.||.|.|||      |||                |.|..|
Sbjct  445  CAAGTGC-GATTAGTGGATGTGGCCTGCA--AGCACCTGACAGATACTTCCCATGGTGTAAGAAATAAGTGCTT  515

Query   50  GCA--------GC---------------------AGTG------------CGGACAGCTC--------------  68
            |||        ||                     ||||            |.||..||||              
Sbjct  516  GCAATTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATACTGAAGGCTCAGCTGCCAGAGATG  589

Query   69  --CAGAAGCTCATCGG----CATCTCCATTG----------------GCAGCCTGC------GCGGGCTG----  110
              |||||..|.|||||    || ||.||.||                |||| ||.|      |.||.|||    
Sbjct  590  TTCAGAAAATTATCGGGGACCA-CTTCAGTGACCAAGATCCACGGTTGCAG-CTCCATGAAAGAGGACTGAAGT  661

Query  111  GGCACC------------------------AAGTGCGCTGTGTCCAACGACCTCACCGAGCAGGAG--------  152
            ..||||                        ||.|||.||.||    |.||   |..||||||||.|        
Sbjct  662  TACACCAAACGATTTATAATCAGGCCTGTAAATTGCTCTCTG----ATGA---CTACGAGCAGGTGCGCAGTGC  728

Query  153  -------------ATACGG----------------ACCCTG-GAGCATTGTCCCAATTCCTTCTTCTAATGAAG  196
                         ||..||                |.|||| |||.||.||.|||||.||.|||||||||||||
Sbjct  729  TGCAGTCCAGCTTATCTGGGTTGTCAGCCAGCTCTATCCTGAGAGTATAGTTCCAATACCGTCTTCTAATGAAG  802

Query  197  AAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCATGTT  270
            ||||.||..|||||||||||||.||||||||||||||.||||||||||||||||||||.||||||||||.||||
Sbjct  803  AAATCCGTCTAGTTGATGATGCATTTGGAAAAATTTGCCACATGGTCAGTGATGGCTCCTGGGTGGTTCGTGTT  876

Query  271  CAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCT  344
            ||.||.|||||.||.||||||||.|||||||||||.||.||||||||||||||||||||.||||||||||||||
Sbjct  877  CAAGCTGCAAAGCTATTGGGCTCGATGGAGCAAGTTAGCTCTCATTTCTTGGAGCAGACTCTTGACAAGAAGCT  950

Query  345  GATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTTCCA  418
            ||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  951  GATGTCAGATCTGAGGAGGAAACGCACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGGGGGAGTTTTCCA  1024

Query  419  GTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGA  492
            |||||||.||.||||.||||||||||||||||||||||.||||.||.|||||.||||||.||||.|||||||||
Sbjct 1025  GTGGCAGGAAATGGGGAGATGATGCTCCCAAGGAAGAAATAGACACGGGGGCCGTGAACCTGATAGAGTCAGGA  1098

Query  493  GCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTG  566
            ||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||
Sbjct 1099  GCGTGTGGAGCCTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGCATTGCTGCTGTGGAGGCTCTGTG  1172

Query  567  CATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAA  640
            ||||.|.|||||||||||.||||||||||||||.|||||||||||.||.|||||||||||||||||.|||||||
Sbjct 1173  CATGCTAGCCCAGTCTTCGCCCTCTTTTGCTGAAAAGTGCCTTGACTTTCTAGTTGACATGTTCAATGATGAAA  1246

Query  641  TTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGATCAG  714
            ||||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1247  TTGAGGAAGTGCGTCTGCAGTCCATACACACCATGAGAAAAATCTCTAACAATATCACCCTCCGAGAAGATCAG  1320

Query  715  CTTGACACTGTCCTGGCTGTGCTAGAGGATTCAGCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTG  788
            |||||||||||||||||||||.|||||||||||.||||.||||||.||||||||||||||||||||||||||||
Sbjct 1321  CTTGACACTGTCCTGGCTGTGTTAGAGGATTCATCCAGGGATATTAGAGAGGCTCTTCATGAACTCTTATGCTG  1394

Query  789  TACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTA  862
            .||||||||.|||||||||||||||||||||||||||.||||||||||.||.|||||..|||||||||||||||
Sbjct 1395  CACTAATGTCTCAACCAAAGAAGGGATTCATCTTGCACTGGTGGAGCTTCTAAAAAACCTAACCAAGTACCCTA  1468

Query  863  CTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTGGTG  936
            ||||.|||||||||||||||||||||||||||||||||||.||.||||||||.|||||.||||||||..|||||
Sbjct 1469  CTGACAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGCAGCCGGCATCCGACCCTCGTGCTTCCTCTGGTG  1542

Query  937  CCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGCAGT  1010
            ||||||||..|||||||.||||||||||||||.||.|||||||||||||||||.|||||||||||.||||||||
Sbjct 1543  CCAGAGCTCTTGAGCACGCACCCATTTTTTGATACTGCTGAACCAGACATGGACGATCCAGCTTACATTGCAGT  1616

Query 1011  TTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCGAGCATTGTTCTCAGATCACACCGTCAGGC  1084
            |||.||.|||||.||||||||||||||.||||||||.|||||||.||||.|.||||||||.||||||.||||||
Sbjct 1617  TTTAGTTCTTATCTTCAATGCTGCTAAGACCTGTCCTACAATGCCAGCACTCTTCTCAGACCACACCCTCAGGC  1690

Query 1085  ACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTGTCA  1158
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.
Sbjct 1691  ACTATGCCTACCTCCGAGACAGCCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGGAGAAAACTGGTGTCC  1764

Query 1159  TCAGCTGTTTCTCCC----AGCATCATACCTCAAGAGGATCCTTCGCAGCAGTTCCTGCAGCAGAGCCTTGAAA  1228
            ||..|||    ||||    |.|||||..|||||.||.||||||||.||||||||||||||||||||||||||||
Sbjct 1765  TCCACTG----TCCCCTCTAACATCACCCCTCATGAAGATCCTTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAA  1834

Query 1229  GAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATC------------  1290
            |.|||||||||.||||||||.|.||.||||||||.|||||.|||||||||||||||||||||            
Sbjct 1835  GGGTGTATAGTGTTCAGCACCTAGATCCTCAGGGGGCCCAAGAGCTGCTGGAATTCACCATCAGAGATCTGCAA  1908

Query 1291  --------------------------------------------------------------------------  1290
                                                                                      
Sbjct 1909  AGACTTGGAGAGCTTCAGTCTGAATTGGCAGGAGTAGCTGACTTCTCTGCCACCTATCTTCAGTGTCAACTGCT  1982

Query 1291  --------AGGCCTTGCAGGAAAAGTCGTGGAATG---------------------------------------  1317
                    |||||||||||||||||..||||||||                                       
Sbjct 1983  CCTCATTAAGGCCTTGCAGGAAAAGCTGTGGAATGTGGCTGCCCCCTTGTATCTAAAGCAGAGTGATTTGGCCT  2056

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2057  CAGCAGCAGCAAAACAGATCATGGAGGAAACCTACAAAATGGAGTTTATGTACAGTGGTGTGGAAAACAAGCAG  2130

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2131  GTTGTGATCATACAGCACATGAGGCTTCAGGCCAAAGCTCTGCAACTCATAGTAACTGCACGAACTACTCGAGG  2204

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2205  AGTAGACCCCTTATTTGGAATGTGTGAAAAATTTTTACAGGAAGTGGATTTTTTTCAGAGGTGTTTCATTGCGG  2278

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2279  ATTTGCCCCACCTTCAAGATAGCTTTGTGGACAAACTCCTTGATCTTATGCCCCGACTCATGGCATCTAAACCT  2352

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2353  GTTGAAGTGATCAAAATTCTGCAGACAATGCTGCGGCAGAGCACCTTCTTACATCTTCCGCTTCCAGAGCAGAT  2426

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2427  ACACAAAGCCTCAGCCACCATTATTGAGCCGGCAGGAGAGTCAGACAATCCTTTGCGGTTTACATCTGGGTTGG  2500

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2501  TGGTAGCCTTGGATGTGGATGCAACCCTGGAACATGTGCAAGACCCCCAGAACACTGTCAAGGTTCAGGTCTTA  2574

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2575  TATCCAGATGGCCAGGCTCAGATGATCCACCCCAAGCCAGCAGATTTCCGGAATCCTGGCCCAGGACGGCACCG  2648

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2649  TCTCCTCACTCAGGTGTACCTCTCCCATACTGCCTGGACAGAACCATGCCAAGTGGAAGTGAGGCTATTGCTGG  2722

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2723  CCTACAACTCCGGTGCACGAATTCCAAAATCTCCATGGCTGGAGGGTAGTGAGATGTCACCACAGGTGGAAACC  2796

Query 1318  ---------------------------------------------------------------------  1317
                                                                                 
Sbjct 2797  AGCATCGAGGGCACCATCCCCTTCAGTAAGCCTGTGAAAGTCTACATAATGCCCAAGCCTGCAAGACGC  2865

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