Nucleotide Global Alignment
Description
- Query:
- TRCN0000469026
- Subject:
- XM_011545352.2
- Aligned Length:
- 2584
- Identities:
- 1248
- Gaps:
- 1292
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTCATCAAGTCCTAGCTCAACTGCTGGATACTTTGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGCATCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTC 222
Query 1 -------ATGCAG-CGGCC--GCTG----------------------AGGGTGGCG-------CAGGGGCCCCG 35
|||||| .|||| |||| |||| | |||.|.||..|
Sbjct 223 ACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGATTATAGGG----GATTACTTCAGTGACCAAG 292
Query 36 GCCAGCCCGGGGCTGCAGCAGTGCGGACAGCTCCAGAAGCTCATCG--GCATCTCCAT----------TGGCA- 96
.|| |.||.|.|.| |.||| |||||..|.|||| ||| | |||.|||||| ||..|
Sbjct 293 ACC--CACGTGTCAG-AACAG------CAGCTATAAAAGC-CAT-GTTGCAGCTCCATGAAAGAGGACTGAAAT 355
Query 97 -----------------------GCCTG-------CGCGGGCTGGGCAC------CAAGTGCGCTGT------G 128
||||| |.| .|||...|| |||||||||.|| |
Sbjct 356 TACACCAAACAATTTATAATCAGGCCTGTAAATTACTC--TCTGATGACTATGAACAAGTGCGCAGTGCTGCAG 427
Query 129 TCCAAC--------GACCTCACCGAGCAGGAGATACGGACCCTG-GAGCATTGTCCCAATTCCTTCTTCTAATG 193
||||.| |.|.|||...||| ...|.|||| .||||||||||||||||||||||||||||
Sbjct 428 TCCAGCTTATCTGGGTCGTCAGTCAGC--------TCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAATG 493
Query 194 AAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCAT 267
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|
Sbjct 494 AAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCGT 567
Query 268 GTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAA 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 GTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAA 641
Query 342 GCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTT 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 642 GCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGGGGGAGTTTT 715
Query 416 CCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCA 489
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 CCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCA 789
Query 490 GGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCT 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 790 GGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCT 863
Query 564 CTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATG 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 864 CTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATG 937
Query 638 AAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGAT 711
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 AAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGAT 1011
Query 712 CAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCAGCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATG 785
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1012 CAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATG 1085
Query 786 CTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACC 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 CTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACC 1159
Query 860 CTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTG 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160 CTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTG 1233
Query 934 GTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGC 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234 GTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGC 1307
Query 1008 AGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCGAGCATTGTTCTCAGATCACACCGTCA 1081
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||
Sbjct 1308 AGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCCAGCATTGTTCTCAGATCACACCTTCA 1381
Query 1082 GGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTG 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 GGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTG 1455
Query 1156 TCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCGCAGCAGTTCCTGCAGCAGAGCCTTGAAAG 1229
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1456 TCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAAG 1529
Query 1230 AGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATC------------- 1290
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1530 AGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAGGGATCTGCAAA 1603
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1604 GACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGATTTCTCTGCCACCTATCTTCGCTGTCAACTACTT 1677
Query 1291 -------AGGCCTTGCAGGAAAAGTCGTGGAATG---------------------------------------- 1317
||||||||||||||||||.||||||||
Sbjct 1678 CTCATCAAGGCCTTGCAGGAAAAGTTGTGGAATGTAGCTGCCCCTTTGTATTTGAAGCAGAGTGATTTGGCCTC 1751
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1752 AGCAGCAGCGAAACAGATTATGGAAGAGACCTACAAAATGGAATTCATGTACAGTGGTGTGGAGAATAAGCAGG 1825
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1826 TGGTGATTATACATCACATGAGGCTGCAGGCCAAAGCTTTGCAACTTATAGTAACAGCACGAACTACACGAGGA 1899
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1900 CTTGACCCCTTATTTGGGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTTCAGAGGTATTTCATCGCTGA 1973
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1974 TTTGCCCCACTTGCAGGACAGCTTTGTGGACAAACTCCTTGACCTTATGCCCCGACTCATGACATCCAAACCTG 2047
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2048 CAGAAGTGGTCAAAATTCTACAGACCATGCTGCGACAGAGTGCCTTTCTGCATCTCCCGCTTCCAGAGCAGATC 2121
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2122 CACAAAGCCTCAGCCACCATCATCGAGCCAGCGGGCGAGTCAGACAACCCTTTGCGGTTTACCTCTGGGTTGGT 2195
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2196 GGTTGCCCTGGATGTTGATGCAACCCTGGAGCATGTGCAGGATCCTCAGAACACTGTTAAGGTCCAGGTCTTAT 2269
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2270 ATCCAGATGGCCAGGCTCAGATGATTCACCCCAAGCCTGCAGACTTCCGGAATCCTGGCCCAGGGCGGCACCGG 2343
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2344 CTCATCACTCAGGTTTATCTCTCCCACACCGCTTGGACAGAGGCATGCCAGGTGGAAGTGAGGCTGCTGCTGGC 2417
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2418 CTACAACTCCAGTGCTCGCATTCCAAAATGCCCCTGGATGGAGGGTGGTGAGATGTCACCACAGGTGGAAACCA 2491
Query 1318 -------------------------------------------------------------------- 1317
Sbjct 2492 GCATCGAGGGCACCATTCCCTTCAGCAAGCCTGTAAAAGTTTATATAATGCCCAAACCTGCACGGCGC 2559
