Nucleotide Global Alignment

Description

Query:
TRCN0000469082
Subject:
XM_011513398.2
Aligned Length:
1953
Identities:
169
Gaps:
1770

Alignment

Query    1  ATGGAACTCTTAACATTCAAGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGTCTGGACATTTCCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCAGAATTTATATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTGGGTGTTACTATCTCTAACC  148
                                  |||||||||||||||||.||||||||||||||||||.||...||||||||||
Sbjct    1  ----------------------ATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTTTTGTGATCTCTAACC  52

Query  149  CAGACCTGGTCACCAGTCTGGAGCAAAGAAAAGAGCCCTACAATTTGAAGATACATGAAACAGCAGCCAGACCC  222
            ||||||||||||||.||||||||||||.|||||||||||.||||||||||||||||||.||||||||||.||||
Sbjct   53  CAGACCTGGTCACCTGTCTGGAGCAAATAAAAGAGCCCTGCAATTTGAAGATACATGAGACAGCAGCCAAACCC  126

Query  223  CCAG-----TGATCTCCCTT----CAAG---TTTACAGGGAGTGCCAGTG-------------------TCCAC  265
            ||||     ||.|||||.||    ||||   ||| ||       ||||||                   |||||
Sbjct  127  CCAGCTATATGTTCTCCTTTCAGCCAAGACCTTT-CA-------CCAGTGCAGGGGATAGAAGATTCATTCCAC  192

Query  266  ---TTTATCACT-------TAC---AAA---GGGC---------TACA--------------------------  288
               .|||| |||       |||   |||   ||.|         ||||                          
Sbjct  193  AAACTTAT-ACTGAAAAGATACGAGAAATGTGGACATGAGAATTTACAATTAAGAAAAGGCTGTAAACGTGTGA  265

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  266  ATGAGTGTAAGGTGCAGAAAGGAGTTAATAATGGAGTTTACCAGTGCTTGTCAACTACCCAGAGCAAAATATTT  339

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  340  CAATGTAATACATGTGTTAAAGTTTTTAGTAAATTTTCAAATTCAAACAAACATAAGATAAGACATACTGGAGA  413

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  414  GAAACCCTTTAAATGTACAGAATGTGGCAGATCGTTTTACATGTCACACCTAACTCAACATACAGGAATTCATG  487

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  488  CTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAAGCCTTTAATAGGTCCACATCACTTAGTAAACATAAG  561

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  562  AGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCCTTTAGACGGTCCACAGTTCTGAA  635

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  636  CGAACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACAAGGTCCA  709

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  710  CAACACTGAATGAACACAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCCTTT  783

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  784  AGATGGTCCACAAGCCTGAATGAACATAAGAATATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGG  857

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  858  CAAAGCCTTTAGACAGTCCAGGAGCCTGAATGAACATAAAAATATTCATACTGGCGAAAAACCCTACACATGTG  931

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  932  AAAAATGTGGCAAAGCTTTTAACCAATCCTCAAGTCTTATTATACACAGGAGCATTCATTCTGAACAAAAACTT  1005

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1006  TACAAATGTGAAGAATGTGGCAAAGCCTTTACTTGGTCCTCATCCCTTAATAAACATAAGAGAATTCATACTGG  1079

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1080  AGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCTTTTTATAGGTCCTCACACCTTGCTAAACATAAGAGAA  1153

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1154  TTCATACTGGAGAGAAACCCTACACGTGCGAAGAATGTGGCAAAGCTTTTAACCAATCCTCAACTCTTATATTA  1227

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1228  CACAAGAGAATCCATTCTGGGCAAAAACCTTACAAATGTGAAGAATGTGGCAAAGCCTTTACACGGTCCACAAC  1301

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1302  ACTGAACGAACATAAGAAAATTCATACTGGCGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTCATAT  1375

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1376  GGTCCGCAAGCCTGAATGAACATAAGAATATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAA  1449

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1450  GCTTTTAACCAATCCTCAGGCCTTATTATACACAGGAGCATTCATTCTGAACAAAAACTTTACAAATGTGAAGA  1523

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1524  ATGTGGCAAAGCCTTTACTCGGTCCACAGCCCTGAATGAACATAAGAAAATTCATTCTGGAGAGAAACCCTACA  1597

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1598  AATGCAAAGAATGTGGCAAAGCCTATAACTTATCCTCAACCCTTACTAAACATAAGAGAATTCATACTGGAGAG  1671

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1672  AAACCCTTCACATGTGAAGAATGTGGCAAAGCCTTCAATTGGTCCTCATCCCTTACTAAACATAAGATAATTCA  1745

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1746  TACTGGAGAGAAATCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAATCGGCCCTCAACCCTTACTGTACACA  1819

Query  289  -----------------------------  288
                                         
Sbjct 1820  AGCGAATTCATACTGGCAAGGAACATAGT  1848

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