Nucleotide Global Alignment

Description

Query:
TRCN0000469082
Subject:
XR_002958858.1
Aligned Length:
2439
Identities:
247
Gaps:
2163

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTGCGAGGGCTTGGTTTAGGGCTTCGGCTCTCTGCGTTCTCGGCTCCGGGAGGCCTCGGTGATTCAGCCACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTCTGCCTCCCGTTGCTCTGTGACCTGAGGGTATTGGACAATTTGTAGCTAAGACTCCCGGATACCCTGAAGT  148

Query    1  ------ATGGAACTCTTAACATTCAAGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGTCTGGACAT  68
                  |||||||||.|||||||||.|||||||||||||||||||||.||.|||||||||||||||||||||..
Sbjct  149  CGGGAAATGGAACTCGTAACATTCAGGGATGTGGCCATAGAATTCTCCCCTGAAGAGTGGAAATGTCTGGACCC  222

Query   69  TTCCCAGCAGAATTTATATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTGGGTGTTACTATCT  142
            |.|||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||.||...||||
Sbjct  223  TGCCCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTTTTGTGATCT  296

Query  143  CTAACCCAGACCTGGTCACCAGTCTGGAGCAAAGAAAAGAGCCCTACAATTTGAAGATACATGAAACAGCAGCC  216
            ||||||||||||||||||||.||||||||||||.|||||||||||.||||||||||||||||||.|||||||||
Sbjct  297  CTAACCCAGACCTGGTCACCTGTCTGGAGCAAATAAAAGAGCCCTGCAATTTGAAGATACATGAGACAGCAGCC  370

Query  217  AGACCCCCAGTGA-------TCTCCCT-------------TCAAGTTTACAGGGAGTGC-CAGTGTCCACTTTA  269
            |.||||||||..|       ||||.||             |.|||  |||||.|   || ||.|.||..|    
Sbjct  371  AAACCCCCAGGTAGACAGAGTCTCACTCTGTTCCCTAGGCTGAAG--TACAGTG---GCACAATCTCAGC----  435

Query  270  TCACTTACAA------------AGGGCTACA-------------------------------------------  288
            |||| |.|||            |||  |.||                                           
Sbjct  436  TCAC-TGCAACCCCCGCCTCTCAGG--TTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAG  506

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  507  GCACGTGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTAGTAGAGACGGGGTTTCACTGAGTTAGCCAGGA  580

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  581  TGGTCTCGATCTCCTGACCTCGTGATCCGCCCATTTCGGCCTCCCGAAGTGCTGGGATTACAGGTGTGAGCCAC  654

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  655  TGCACCACGTCAGGATTGCGTCTTATGTTAATGCGAAATATGCATAGCTGTCATACGAAGTATACCACCATTCC  728

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  729  CTTCAGCACTCTACGTCAGAGGAGGCACGTCAGGGGAGACAAAATTCCTCTTCGGACAGTCCCTCAAAAGACAG  802

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  803  GAATGTGGACATATATTCCACATTTCTCTTTGTCTCCTGAGGAAGAAGCATAGAGTTGGGAGTTTCTCCTGGAT  876

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  877  TGCACCATGCTGTATTGGGAGGAGGTCAGGCTGCGCTGGGCATATCTAATAAGCTTTTTCTTCTCTTCTACATG  950

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct  951  TTTTTGGCATTGTGCTCAACTGAAGTAGTACAAATTCTTAACTATGTTCAGGAATTCTCACAAAGGCAATGTGA  1024

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1025  TCAGCGTGGTGTTAAGTTCATATATCTATGAAGAAACGAGGACCAGTGGTGTTTGTTTTTACGCTTTTCATTTT  1098

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1099  AAATTTATATTTTATTTATTATTTTAATTTTTGTGAGTACGTAGTACATATATGTATCTATGGATTATATCACT  1172

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1173  GATTTTGATGAAGGCATGAAATGCACAAAAATAACATCAGATAAATGGTTATTCATTGCCTCAACTATTTGTTC  1246

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1247  TTTATTTTACGAACAATCTAATAACATTCTTTTAGTTACTTAAAAATGTACAATTAAATTGCTTTGACTATAGT  1320

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1321  CACTCCCGACCAGAGAAAAACCCTGTAGACATTAGTCACTCCTCATTCTGTCTCAAACCCTCTCCCTGACCCTC  1394

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1395  AGCCCTAGGTAGCAACTACCTAGTGCGATCAATCCCATATGCATAGATTACCATATTGTGGACATTTCCTATAA  1468

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1469  GCGGAATTGCACAATAGGGGAGCTGTTATGACTGACATAACACGTAGCACAATATTTTCAAGATTCGTCCACAT  1542

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1543  TGTAGGCTTACCCACAGGGGGAAACCATTTTTTTGGGGGCTTTTAGTAACACCGGTGTTTTCTCCTTCCTTACG  1616

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1617  TCCTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTGACTTCCTTCTTTCCTTCCCTC  1690

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1691  CTTCCTCCTATTTCTCTCTTACTCCTTCTGCCCTCTCTCTTTCCTATGCCTTAGGTGCATCCCACATTCTGCGT  1764

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1765  TTTTTTGGGGAAATCCTCGACAGGTGCAGGAAAATTGTGTTATTGTAACTATTTACCGTTATCTCTCTTTCACG  1838

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1839  GCTCTCCATCAGTTGTGAACATCTATTGGTTTATCCCAAGTCACTAAGCATATTTTCATTAGGTAAACCTGTTT  1912

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1913  TTCCTTATACAGCTGTTTCTGGAGTATAGGGTCGCATACTCATAAACCCAGTGTAACTCAGAAACGCATCTAAT  1986

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 1987  ATTCCAGTAAACCCATCATAACGTTGAAAAATCGTAAATCAAACCATCATAAGTCACGGTTTGTCCGTGGATAT  2060

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 2061  GGGCGTCATCAATTCCATTGTATTCAGTAATGCTGTACACCATTAACAATGGCAGACTGATTGGGAGTGGATAT  2134

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 2135  TGATAGCATTATAAAAGTCAGTTATTAGAGGGATACTTCTTTAACCTGACTGAAGAACTGATCTAATGGCTTTA  2208

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 2209  GTACAGTGCATGATTATGTGCGATGTTTTGAGACAGAGTAGTACATTTGTGAATGAAATTTTATGGCTTTTTTT  2282

Query  289  --------------------------------------------------------------------------  288
                                                                                      
Sbjct 2283  TCACTTAGTAGGAACCATTGTGTGTGGAAAAGTGAGAAAATGGCTTTCTGCTGTAGGGTCTGGCATTCATTGTA  2356

Query  289  -----------------------------------------------------------------------  288
                                                                                   
Sbjct 2357  GATGTAAGCTTATTTTTCTGTGAGCAAATCTTATTCAATAAAATACTACTCTTTATACTAAAAAACAAAAA  2427

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