Nucleotide Global Alignment

Description

Query:
TRCN0000469235
Subject:
XM_011250976.2
Aligned Length:
1648
Identities:
1341
Gaps:
161

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCCGGGGCCCGCCGCCCAGCAGAGTTGTGTTTTCCTGATCCGGGCTCGGGCCGCCCCTCCTCCGGGACCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCTCGGGAACCCGTCGCCCGCGGCGCTTAGTTAGGACTGGAGTGCTTGGCGCGGTGGACAAGTCCTATTTTC  148

Query    1  --------ATGACTTTTAACAGTTTTGAAGGATCTAAAACTTGTGTACCTGCAGACATCAATAAGGAAGAAGAA  66
                    ||||||||||||||||||||||||.|||.|||||.|||||.||||||||.|||||||||.||||||
Sbjct  149  CAGAGAAGATGACTTTTAACAGTTTTGAAGGAACTAGAACTTTTGTACTTGCAGACACCAATAAGGATGAAGAA  222

Query   67  TTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACACT  140
            |||||||||||||||||||||||||||||.||||||||.||.||||||.|||||||||||||||||||||||.|
Sbjct  223  TTTGTAGAAGAGTTTAATAGATTAAAAACATTTGCTAACTTCCCAAGTAGTAGTCCTGTTTCAGCATCAACATT  296

Query  141  GGCACGAGCAGGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCATGCAGCTGTAGATA  214
            |||.|||||.||||||||||||||.|||||||||||.|||||||..||.||.|||||||||||.||..||||||
Sbjct  297  GGCGCGAGCTGGGTTTCTTTATACCGGTGAAGGAGACACCGTGCAATGTTTCAGTTGTCATGCGGCAATAGATA  370

Query  215  GATGGCAATATGGAGACTCAGCAGTTGGAAGACACAGGAAAGTATCCCCAAATTGCAGATTTATCAACGGCTTT  288
            |||||||.||||||||||||||.||||||||||||||||.|.|||||||||||||||||||||||||.||.|||
Sbjct  371  GATGGCAGTATGGAGACTCAGCTGTTGGAAGACACAGGAGAATATCCCCAAATTGCAGATTTATCAATGGTTTT  444

Query  289  TATCTTGAAAATAGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGTTGAAAACTATCT  362
            |||.||||||||.||||..|.||||||||||||.||||||||||.|||||.|||||||||..||||||||.|.|
Sbjct  445  TATTTTGAAAATGGTGCTGCACAGTCTACAAATCCTGGTATCCAAAATGGCCAGTACAAATCTGAAAACTGTGT  518

Query  363  GGGAAGCAGAGATCATTTTGCCTTAGACAGGCCATCTGAGACACATGCAGACTATCTTTTGAGAACTGGGCAGG  436
            |||||..|||.|||.|||||||...|||||||||.|||||||.|||||.||.|||||.|||||||||||.||||
Sbjct  519  GGGAAATAGAAATCCTTTTGCCCCTGACAGGCCACCTGAGACTCATGCTGATTATCTCTTGAGAACTGGACAGG  592

Query  437  TTGTAGATATATCAGACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATTAAAGTCCTTT  510
            ||||||||||.||||||||||||||||||||||||||||||||||.||||||||||||.|||||.|||||.|||
Sbjct  593  TTGTAGATATTTCAGACACCATATACCCGAGGAACCCTGCCATGTGTAGTGAAGAAGCCAGATTGAAGTCATTT  666

Query  511  CAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTGCTGGACTCTACTACACAGGTATTGG  584
            |||||||||||.|||||||||||..|||||||.|||||||||||.||||||||.||||||||||||||...||.
Sbjct  667  CAGAACTGGCCGGACTATGCTCATTTAACCCCCAGAGAGTTAGCTAGTGCTGGCCTCTACTACACAGGGGCTGA  740

Query  585  TGACCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTGGTCAGAAC  658
            |||.||||||||.||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||
Sbjct  741  TGATCAAGTGCAATGCTTTTGTTGTGGGGGAAAACTGAAAAATTGGGAACCCTGTGATCGTGCCTGGTCAGAAC  814

Query  659  ACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGAATCTTAATATTCGAAGTGAATCTGATGCTGTG  732
            |||||.||||||||||.||||||||.|||||||||||||||||..|||||.|||||||||||||   ||.||||
Sbjct  815  ACAGGAGACACTTTCCCAATTGCTTTTTTGTTTTGGGCCGGAACGTTAATGTTCGAAGTGAATC---TGGTGTG  885

Query  733  AGTTCTGATAGGAATTTCCCAAATTCAACAAATCT-TCCAAGAAATCCATCCATGGCAGATTATGAAGCACGGA  805
            |||||||||||||||||||||||||||||||| || |||||||||||||.||||||||||.|||||||||||||
Sbjct  886  AGTTCTGATAGGAATTTCCCAAATTCAACAAA-CTCTCCAAGAAATCCAGCCATGGCAGAATATGAAGCACGGA  958

Query  806  TCTTTACTTTTGGGACATGGATATACTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAGGT  879
            ||.||||||||||.|||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  TCGTTACTTTTGGAACATGGACATCCTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAGGT  1032

Query  880  GAAGGTGATAAAGTAAAGTGCTTTCACTGTGGAGGAGGGCTAACTGATTGGAAGCCCAGTGAAGACCCTTGGGA  953
            |||||.||||||||.||||||||||||||||||||||||||.||.|||||||||||.|||||||||||||||||
Sbjct 1033  GAAGGCGATAAAGTGAAGTGCTTTCACTGTGGAGGAGGGCTCACGGATTGGAAGCCAAGTGAAGACCCTTGGGA  1106

Query  954  ACAACATGCTAAATGGTATCCAGGGTGCAAATATCTGTTAGAACAGAAGGGACAAGAATATATAAACAATATTC  1027
            |||.|||||.||.|||||.||||||||||||||.||.||.||..|||||||.||||||||||||||.|||||||
Sbjct 1107  ACAGCATGCGAAGTGGTACCCAGGGTGCAAATACCTATTGGATGAGAAGGGGCAAGAATATATAAATAATATTC  1180

Query 1028  ATTTAACTCATTCACTTGAGGAGTGTCTGGTAAGAACTACTGAGAAAACACCATCACTAACTAGAAGAATTGAT  1101
            |||||||.||||||||||||||.|.|.|||.|||||||.||||.|||||||||||.|||||||.||.|||.|||
Sbjct 1181  ATTTAACCCATTCACTTGAGGAATCTTTGGGAAGAACTGCTGAAAAAACACCATCGCTAACTAAAAAAATCGAT  1254

Query 1102  GATACCATCTTCCAAAATCCTATGGTACAAGAAGCTATACGAATGGGGTTCAGTTTCAAGGACATTAAGAAAAT  1175
            ||||||||||||||.|||||||||||.||||||||||||||||||||.||.||.|||||||||||||||||||.
Sbjct 1255  GATACCATCTTCCAGAATCCTATGGTGCAAGAAGCTATACGAATGGGATTTAGCTTCAAGGACATTAAGAAAAC  1328

Query 1176  AATGGAGGAAAAAATTCAGATATCTGGGAGCAACTATAAATCACTTGAGGTTCTGGTTGCAGATCTAGTGAATG  1249
            ||||||.||||||||.||.|.|||.|||||||.||||..||||||||||||.|||.||||||||||.||||.||
Sbjct 1329  AATGGAAGAAAAAATCCAAACATCCGGGAGCAGCTATCTATCACTTGAGGTCCTGATTGCAGATCTTGTGAGTG  1402

Query 1250  CTCAGAAAGACAGTATGCAAGATGAGTCAAGTCAGACTTCATTACAGAAAGAGATTAGTACTGAAGAGCAGCTA  1323
            ||||||||||.|.||.|.|.||||||||||||||.||||||||.||||||||.|||||||||||||||||||||
Sbjct 1403  CTCAGAAAGATAATACGGAGGATGAGTCAAGTCAAACTTCATTGCAGAAAGACATTAGTACTGAAGAGCAGCTA  1476

Query 1324  AGGCGCCTGCAAGAGGAGAAGCTTTGCAAAATCTGTATGGATAGAAATATTGCTATCGTTTTTGTTCCTTGTGG  1397
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1477  AGGCGCCTACAAGAGGAGAAGCTTTGCAAAATCTGTATGGATAGAAATATTGCTATCGTTTTTGTTCCTTGTGG  1550

Query 1398  ACATCTAGTCACTTGTAAACAATGTGCTGAAGCAGTTGACAAGTGTCCCATGTGCTACACAGTCATTACTTTCA  1471
            ||||||.||||||||||||||.|||||.||||||||||||||.|||||||||||||||||.||||||||.||||
Sbjct 1551  ACATCTGGTCACTTGTAAACAGTGTGCAGAAGCAGTTGACAAATGTCCCATGTGCTACACCGTCATTACGTTCA  1624

Query 1472  AGCAAAAAATTTTGATGTCT  1491
            |||||||||||||.||||||
Sbjct 1625  AGCAAAAAATTTTTATGTCT  1644

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