Nucleotide Global Alignment
Description
- Query:
- TRCN0000469304
- Subject:
- XM_011518063.2
- Aligned Length:
- 5511
- Identities:
- 1368
- Gaps:
- 4137
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGCGGACGCCGGACCAGGACTCATTTCTTCAAGTGGTTTCGACTTCCTATTATCTGGATTTGATCCATC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTTATGTCAGATCAACTAAGCCTGGTCCATCATGGTTACAAAGTGCCCAGCCTGGCACCATGCATGGTATGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACACTGATTCGAAGAGAGAGCCTCCATGAAGATTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGTCTGACCTCTTGAATAGTCACAAAACTGAAGACTCGAGTTCCAGGACCGCACGCTCCGAGGAGGACCGGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCGGGGGTGGGGCCTCCTACTCTCTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGAACATGCAGTAATGTGGACTGCCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGTCAAGCACCATGGCCAGTTTTATGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCCAAGCCAAAGGAACAACCCTGGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCTTTGGATATGTGCATCAGTGGTTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGATAACTGTGGGGTCTGCAACGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCGCAACCAAATCGGATGATACTGTGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCTGATCACTTATATCTGGAAACCAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTTCCTTGTGGACAATTCTAGTGTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCACAGCAGATTTCATTGTCAAGATTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCCATCATCCACCGATGGAGGGAGACG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATCGGCTGAGTGCTACGATCTGAGGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCAAACCCAAACCCAAGCTTCAGGAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCTTATGACCTCTACCATCCCCTTCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCTAAGATGCCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCGTGCACAGTGACATGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCCAGGGCCTCAGATACCGTGTGGTCCTCTGCATCGACCATCGAGGAATGCACACAGGAGGCTGTAGCCCAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCCCTGCTATAAACCCAAAGAGAAACTTCCAGTCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAGCTGCTGTGTCAGAGGAGCCCTCGTTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTGGGGACCCAGGTGCGAATAGTCAGGTGCCAGGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGACGAGTGTGAAGGGCCCAAGCCAGCATCCCAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCAGACGAGACAGATGGGCTCTTTGGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAGGGGTTCACCAAGTGCTCCGAGTCCTGTGGAGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGACTCGGGAGCCTGCTGAGGAGAACCTGTGCGTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCAAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGAGACGTCTTCTGCAGCCACCTGCTTTCCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCAGCCCAAGCCCAGCACGGTGCAAGCTTGTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCCGTGTTCCAGAACGTGTGGCGGGGGTGTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGCAGCTTCCTGGAGCTTCCTGAGACCTTCTGTTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCAGCGAGTGGCTTCTCTCAGACTGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATTTGCCGAAAGATGCTGAAAACCGGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCTTCCTCCATCAGGCCCTGTATGCTGGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCACATCGCGGCCGCCAGGAAGGTCTACATAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCTTCGCCTACCTGCTCCCCAAGACGGCGGTGGTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTGGGAGAAGGACGGCCAGCACCTCATCAGCTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCACCGCCTCAAGCCCTCGGATGCAGGCGTCTACA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTCATCGGAGGCAACCGCAAGCTCGTGGCCCGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGGAAGGGCGGCCCGAAGGAGGCCCTGCAGACCCA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGGGCCTGGCCGCCAACCCGGGGAGCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCTGGCCCGGAGAGCTGCTGGCCTCGTGGGAGGCG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCAGAGCAAGTGCTCCTGCACCTGCCCTT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACCTCTCCCAGCAGCCCGAGGAGCTGCGCG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGATCTTCCGCAGCCACCTGGAGCACCAGGACACG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCTCATAAACACGTGTCTGGCTTCAGCAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTCTCGAAGGCCACACCGCAAGCCCACCATCCTGC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCACCTGGGGCAGACGGTGGCCCTGGCC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAGGCCTACCATCAGCTGGGCCAGGAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCCAGATGATTCCTTACAGATCTTGGCACCAGTGG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCTTGGGATACGACTCTGTCTCCATTGCCGTCACA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTGATCAACACGGAGAAGCCTGCAGTCACAGTCGA 4070
Query 1 -----------------------------------ATGTG---TTTGACTG--ATGAGTGGGGTTTTTTGTTTT 34
||||| .|..|||| | ||||
Sbjct 4071 TATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAATCAACTGCCA-------GGTT--------- 4128
Query 35 TTTTTTTCTTCCTAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCAC 108
..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4129 -----------GCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCCCCGCAC 4191
Query 109 CATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGC 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4192 CATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGC 4265
Query 183 CAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACAGTTGG 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4266 CAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACAGTTGG 4339
Query 257 AAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAG 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4340 AAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAG 4413
Query 331 CTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATATCACCTG 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4414 CTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATATCACCTG 4487
Query 405 GTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTC 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4488 GTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTC 4561
Query 479 AAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCCCAGAATGAGGCAGGGGTGCTCATG 552
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 4562 AAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCTCAGAATGAGGCAGGGGTGCTCATG 4635
Query 553 CAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCTGTGG 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4636 CAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCTGTGG 4709
Query 627 TAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAG 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4710 TAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAG 4783
Query 701 GGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTCC 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4784 GGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTCC 4857
Query 775 TGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTC 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4858 TGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTC 4931
Query 849 TGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTA 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4932 TGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTA 5005
Query 923 ACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTA 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5006 ACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTA 5079
Query 997 GCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCT 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5080 GCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCT 5153
Query 1071 TCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTGGACCC 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5154 TCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTGGACCC 5227
Query 1145 TGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAG 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5228 TGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAG 5301
Query 1219 GCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACCCCATGTGA 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5302 GCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACCCCATGTGA 5375
Query 1293 AAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGT 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5376 AAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCCAACTCAGCCAGT 5449
Query 1367 TTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 1401
|||||||||||||||||||||||||||||||||||
Sbjct 5450 TTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 5484