Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_024507.2
- Aligned Length:
- 3998
- Identities:
- 239
- Gaps:
- 3727
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCTGTAGAGCTCCGATGATGGCTGTTGGCCGAATGGATGAATGGCTTCATTAACTTCACTGCAACACGCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCTTGATCTCCCCCCTTGAAAGGCTGGAGCACAGTGGCATGATCTCGGCTAACTGCAACCTCTGCCTGCCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGCAAACAATGGACTATTGACTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTTCAGAGCTGTGGGTGTTCTCAGAGGGAGGCCAGCCAGAACACCAGCATCTCCGGCTTTTCTTCCAACTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGTTGGAGCTCCATCTATCAGAAATATGAAACCCTGGAATCTTCCTCCTCCTCACTTCTCTGCCTTAAGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTAGTCCACTGCCTGGAACATGGAAGATGCTCCATAATTGTTTGCTGAAGGAACGAGTGATAACCAGAGAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCTCCTGCTTCCTGATTAAGGCATGCAGTCAGGCCAGTGGGGAAATGGGCCTCATGGTGGAGCTTGCCTCTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGAAGACTGACGGAGCCAGGGCTCTGCCTGCCACAATTCATGAGCTGGCCAGAGGTCTTTGGATTCCTCCCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCATTGCTGAGATGAGTGAGGATTGTTTCAGAAAATCAGGCCTCCTCCTGGGGAATGTGCCTCAGCTTCTGGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTCAAGAATGAGGTTGGAAGAGATCATTCTCCTGTTTGCAAATGAGAAACAAGTATAGGTGTGAAGAGACCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCACAGCCATTCAACAAATGAAAAGTCCAATCGAAGATGGGACCTGATTTCTTACACCCCAGAATACCATCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCTCCTCTGGAACATGTCCTTGTCTTCTCAGAGTGTGAAGTGTGTGTGTGACAGTGCTTTTCTGAGGACTCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGACCTGGAGGCTGGAGAACAGCATGGAGCAAGGAAAACAAAGACGATGTGCTGGAGTGTATGTTGCTTTCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATTATGTGAAAGAAAATGTAGAGAAATTTGAAAGGTAAGATCTGACCGCTTTGACCCCTCTCCTCACACCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTATGCCCCACTTTCTTGAAGACCCACTCCCCAGCTTAGCAGCCAGGTACCCATCACAGCCTGGCTTCAAGAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAGCCCAGTCCGCCAGGTTTGTTCTCTCTCCTTCGGTCTGTCTCTGTTGGCCAGTCTGTCCAGGAGTCACTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTCCATGGGTCAGTCTCTCCTTCTTTCTGACTGTCTTCCTATCATTCTTTCTCAGTTGTTCCCTCTCACCTTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGGCTGCCTAATTTCTCTCTCATCATGTCTTTACTTCTCTCCTAGCCTCATTTCCAGCTTTGGCTTCCTCATAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTAAAGTGTGCTGTGGCCCCAACATGGCATCCTGACTTCTTTTCAGAGTCTGCCTCCAAGCTTCTGGCTGGTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCCACATACTCCAATTCATATCCCTTCACATTACATCAAGCTGGCTCAGTCTGTCTCTTCTCCTCTGGCCAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAATGGCAGATCACCTTGGTCAAGCATGTCCTCTGGACCAATTGCCCCAGACCAGGATTATTTAAATACAACTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTCCATCTGCAGTTGTCCTTAAAATCTGATTTATAGAAGGTCTGTGTGGGCTTGGCATTTCTGGTGTCCACTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCTGTCTAGTGAATTGTCCTTCTTCCATGACGCCAGTGGTGATAGATCTCACCCTCCTCTGATCCCTGGGCCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTGGTTGTGGAGTTTATGGGCCACTTCTGCAACTTGATGGCCTTGGGCCATGGAAAGGCCTGTCACCCCTTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGGCACTAGAATGGAAGCTTCAGTAGGGCAGGAACCCTATTTAGGCATTTCAGTTAGGCTTGGCACACTGTCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGCATGGAGAAAGCTCAGAATAAGACAGAGATCCTAAAGTATCTTCAACAGAACTAATCTGACAAATTTCCAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCTCCTTTGGGAGATAAAATCTACTTGGGGGAATGGGAAAAGGATGTCTACATAGATTTAGAATAACGACCACC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACCACCATCATCATCCTTGACAGAACCTTTATGCCAGGTGCTGTTCTAAAGCACTTTACATACTTTATCTCATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAATCCTAACAACAGCCCTGTAAGATAACTGTTACTATGCCCTTTTTACCTTTAATGAAGAAACAGCCTCAGGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGATTAAGAAATTCACCCAAGGTCACAGAGCTAGAAGGTGAAAGAGCTGGATTTCCAACCCAAGTGTGCCTGAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTCAACTCTGATCTAAGATGTGGACGCACATGGGCAGAATGATGACGTGCTCTTCCCAACCTCTCATTTAGCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCATGTGAGAGGGCAAGGTGTCTTCAGCAACCATTTCATTTGTAAACATACGTGTTTTTATCCTTGGTCTACGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AATAGTATTACCACACAGGTAATACCAGTGGGTGCTGGGTGTTTTTTTTTTTTTCCTCTTCTACATATTCCCTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAAAATAAATTATTAATTGCCCCTCTTCTAAATCTTATGTCACAGTCTTTAATGCCTGCATCTGAATTGCTGTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAAACATCTCTTGGAGTCGTTCCCTGTGATATTACAGTCCGGGTTCCTGCGGCGTAATCCCACTTGCTGGTTTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCCCTTTGCATTGCATTTGGGTGATGAATGGCCCTTTGATGTTCCTGGCATCTGCCTTCCTGCCTCAGGAACTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACTGCTGGGTCCTCTTTTCCCTGCTAATGGCCCTGTTTGCCTTCCACGACAGTTGAGACTCAGAAACACTTGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCCACGGCACCTTTGGACATTGCAGTTTGCCTCTGTTTCACTGCCCTTTCTTCTATTTTTCTTTACTCTGCCTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTCTGTTCTTTGCTCTGGCCTGCTCCTGTTCCCTGGCAGCTCCAGCCATGCAGCAAACAGTCACCAGTCTTCAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTTATCCTCAGAACTGGTGACACAGCACCTACTCTCCTTATCTCTGTAGAGGCTTCCTCCAAAATTTCTATTAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTAACCCTTTCTCCTAGACTCCTCCTTGCCGCTCATCATGGCTGAGGCCCTGCTCAGATCTGTTTCCCTCAGTT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTTTGGGAAAGCAGCTGTCTGACATTGATGTGCATTTGTTTAGCCTTTTCTATGTGTCAAGCATAGGTTTGTAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AGTCATAGAGGTGGATAACATAGTCTTAGGTGCTTTTCTTCTTTTTTTATAGACTGCGTCTTGCTCTGTCACCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGACTGGACTGCAGTGGCACAATCACAGCTACCTGTAACCTCAAACTCCTGGGCTCATGCAATCCTCCCACCTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGCCTCTGGAGTAGCTGGGACTACAGGTTTGTGCCACTAAGCCTGGATAATTTTTTAAATTTTTTGTAGAGATG 3330
Query 1 --------------------------------------------------ATGGAGTCTTGCTCTGTCACCCAG 24
|..|||||||||||||||||||||
Sbjct 3331 GGGTTCTCGCTATGTTGCCCAGGCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCACCCAG 3404
Query 25 GCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACC----AGGTTCAAGCGATTCTCCTGTC 94
||||||||||||||||.|||||||..|||||||||||||| .||| .|||||||||.|||||.|||.|
Sbjct 3405 GCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTC----CACCTCGTTGGTTCAAGCAATTCTACTGCC 3474
Query 95 TCAGCCTCCTGAGTAGCTGGGATTACAGG--TGCCCACCACCA----CAGCTGGCTAATTTTTGTATTTTTAGT 162
||||||||||||||||||||||.|||||| || ||.||||| ||||||..| |||||.||||||||||
Sbjct 3475 TCAGCCTCCTGAGTAGCTGGGACTACAGGCATG--CAACACCATGCCCAGCTGATT--TTTTTATATTTTTAGT 3544
Query 163 AGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTT 236
|||||..||||||.|||||.||||.|||.|||||||||||||||||||||||..||.| |||||||||..||||
Sbjct 3545 AGAGAGGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAAATGAT-CGCCTGCCTCAGCTT 3617
Query 237 CCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT---------------------------- 282
||||||||||||||||||.|||..|.||||||.|.|||||||| |
Sbjct 3618 CCCAAAGTGCTGGGATTACAGGCTTAAGCCACCGTGCCTGGCC--TGCCCAGGCTTTTTAAAAAATAGATTTTA 3689
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3690 TTTTTTAAGTCTTTGGTCCACATAACCACAGCCTCCCCTACTATCAACATCCCACACCAGAGCAGTACATTTGA 3763
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3764 CATATTCGACGCACCTAACTTGACACATCATTATCACTCAAAGTCCACAGCTTACTCTAGGGCTCGTTCTTGGC 3837
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3838 ATTGTGCATTCTGTGGGTTTTGACAAATGTATAATGACATGCGTCCACCATTGTAGTATCATCAGGAGTGGTGT 3911
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3912 CATGGCCCTATACATCCTTCATGTCTTAGGGATTTTTAAAGCCTAGTAAAAGACATCGGAAAAAAAAAAAAAAA 3985
Query 283 -- 282
Sbjct 3986 AA 3987
