Nucleotide Global Alignment

Description

Query:
TRCN0000469746
Subject:
NR_024507.2
Aligned Length:
3998
Identities:
239
Gaps:
3727

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGCTGTAGAGCTCCGATGATGGCTGTTGGCCGAATGGATGAATGGCTTCATTAACTTCACTGCAACACGCAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTCCTTGATCTCCCCCCTTGAAAGGCTGGAGCACAGTGGCATGATCTCGGCTAACTGCAACCTCTGCCTGCCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGCAAACAATGGACTATTGACTAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTTTCAGAGCTGTGGGTGTTCTCAGAGGGAGGCCAGCCAGAACACCAGCATCTCCGGCTTTTCTTCCAACTCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAGTTGGAGCTCCATCTATCAGAAATATGAAACCCTGGAATCTTCCTCCTCCTCACTTCTCTGCCTTAAGATC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTAGTCCACTGCCTGGAACATGGAAGATGCTCCATAATTGTTTGCTGAAGGAACGAGTGATAACCAGAGAAGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGCTCCTGCTTCCTGATTAAGGCATGCAGTCAGGCCAGTGGGGAAATGGGCCTCATGGTGGAGCTTGCCTCTGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGGAAGACTGACGGAGCCAGGGCTCTGCCTGCCACAATTCATGAGCTGGCCAGAGGTCTTTGGATTCCTCCCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCATTGCTGAGATGAGTGAGGATTGTTTCAGAAAATCAGGCCTCCTCCTGGGGAATGTGCCTCAGCTTCTGGTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATTCAAGAATGAGGTTGGAAGAGATCATTCTCCTGTTTGCAAATGAGAAACAAGTATAGGTGTGAAGAGACCTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCCACAGCCATTCAACAAATGAAAAGTCCAATCGAAGATGGGACCTGATTTCTTACACCCCAGAATACCATCGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGCTCCTCTGGAACATGTCCTTGTCTTCTCAGAGTGTGAAGTGTGTGTGTGACAGTGCTTTTCTGAGGACTCAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGACCTGGAGGCTGGAGAACAGCATGGAGCAAGGAAAACAAAGACGATGTGCTGGAGTGTATGTTGCTTTCAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATTATGTGAAAGAAAATGTAGAGAAATTTGAAAGGTAAGATCTGACCGCTTTGACCCCTCTCCTCACACCAGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTATGCCCCACTTTCTTGAAGACCCACTCCCCAGCTTAGCAGCCAGGTACCCATCACAGCCTGGCTTCAAGAAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGAGCCCAGTCCGCCAGGTTTGTTCTCTCTCCTTCGGTCTGTCTCTGTTGGCCAGTCTGTCCAGGAGTCACTCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCCATGGGTCAGTCTCTCCTTCTTTCTGACTGTCTTCCTATCATTCTTTCTCAGTTGTTCCCTCTCACCTTAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGGCTGCCTAATTTCTCTCTCATCATGTCTTTACTTCTCTCCTAGCCTCATTTCCAGCTTTGGCTTCCTCATAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTAAAGTGTGCTGTGGCCCCAACATGGCATCCTGACTTCTTTTCAGAGTCTGCCTCCAAGCTTCTGGCTGGTCT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGCCACATACTCCAATTCATATCCCTTCACATTACATCAAGCTGGCTCAGTCTGTCTCTTCTCCTCTGGCCAGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAATGGCAGATCACCTTGGTCAAGCATGTCCTCTGGACCAATTGCCCCAGACCAGGATTATTTAAATACAACTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTCCATCTGCAGTTGTCCTTAAAATCTGATTTATAGAAGGTCTGTGTGGGCTTGGCATTTCTGGTGTCCACTCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTCTGTCTAGTGAATTGTCCTTCTTCCATGACGCCAGTGGTGATAGATCTCACCCTCCTCTGATCCCTGGGCCT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTTGGTTGTGGAGTTTATGGGCCACTTCTGCAACTTGATGGCCTTGGGCCATGGAAAGGCCTGTCACCCCTTTT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTGGCACTAGAATGGAAGCTTCAGTAGGGCAGGAACCCTATTTAGGCATTTCAGTTAGGCTTGGCACACTGTCT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGCATGGAGAAAGCTCAGAATAAGACAGAGATCCTAAAGTATCTTCAACAGAACTAATCTGACAAATTTCCAAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GCTCCTTTGGGAGATAAAATCTACTTGGGGGAATGGGAAAAGGATGTCTACATAGATTTAGAATAACGACCACC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACCACCATCATCATCCTTGACAGAACCTTTATGCCAGGTGCTGTTCTAAAGCACTTTACATACTTTATCTCATT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TAATCCTAACAACAGCCCTGTAAGATAACTGTTACTATGCCCTTTTTACCTTTAATGAAGAAACAGCCTCAGGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGATTAAGAAATTCACCCAAGGTCACAGAGCTAGAAGGTGAAAGAGCTGGATTTCCAACCCAAGTGTGCCTGAT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GTCAACTCTGATCTAAGATGTGGACGCACATGGGCAGAATGATGACGTGCTCTTCCCAACCTCTCATTTAGCCA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCATGTGAGAGGGCAAGGTGTCTTCAGCAACCATTTCATTTGTAAACATACGTGTTTTTATCCTTGGTCTACGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AATAGTATTACCACACAGGTAATACCAGTGGGTGCTGGGTGTTTTTTTTTTTTTCCTCTTCTACATATTCCCTC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAAAATAAATTATTAATTGCCCCTCTTCTAAATCTTATGTCACAGTCTTTAATGCCTGCATCTGAATTGCTGTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AAAACATCTCTTGGAGTCGTTCCCTGTGATATTACAGTCCGGGTTCCTGCGGCGTAATCCCACTTGCTGGTTTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TCCCTTTGCATTGCATTTGGGTGATGAATGGCCCTTTGATGTTCCTGGCATCTGCCTTCCTGCCTCAGGAACTC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ACTGCTGGGTCCTCTTTTCCCTGCTAATGGCCCTGTTTGCCTTCCACGACAGTTGAGACTCAGAAACACTTGCA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CCCACGGCACCTTTGGACATTGCAGTTTGCCTCTGTTTCACTGCCCTTTCTTCTATTTTTCTTTACTCTGCCTC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TTCTGTTCTTTGCTCTGGCCTGCTCCTGTTCCCTGGCAGCTCCAGCCATGCAGCAAACAGTCACCAGTCTTCAC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TTTATCCTCAGAACTGGTGACACAGCACCTACTCTCCTTATCTCTGTAGAGGCTTCCTCCAAAATTTCTATTAC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TTAACCCTTTCTCCTAGACTCCTCCTTGCCGCTCATCATGGCTGAGGCCCTGCTCAGATCTGTTTCCCTCAGTT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CTTTGGGAAAGCAGCTGTCTGACATTGATGTGCATTTGTTTAGCCTTTTCTATGTGTCAAGCATAGGTTTGTAT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AGTCATAGAGGTGGATAACATAGTCTTAGGTGCTTTTCTTCTTTTTTTATAGACTGCGTCTTGCTCTGTCACCC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGACTGGACTGCAGTGGCACAATCACAGCTACCTGTAACCTCAAACTCCTGGGCTCATGCAATCCTCCCACCTC  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AGCCTCTGGAGTAGCTGGGACTACAGGTTTGTGCCACTAAGCCTGGATAATTTTTTAAATTTTTTGTAGAGATG  3330

Query    1  --------------------------------------------------ATGGAGTCTTGCTCTGTCACCCAG  24
                                                              |..|||||||||||||||||||||
Sbjct 3331  GGGTTCTCGCTATGTTGCCCAGGCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCACCCAG  3404

Query   25  GCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACC----AGGTTCAAGCGATTCTCCTGTC  94
            ||||||||||||||||.|||||||..||||||||||||||    .|||    .|||||||||.|||||.|||.|
Sbjct 3405  GCTGGAGTGCAATGGCACGATCTCAGCTCACTGCAACCTC----CACCTCGTTGGTTCAAGCAATTCTACTGCC  3474

Query   95  TCAGCCTCCTGAGTAGCTGGGATTACAGG--TGCCCACCACCA----CAGCTGGCTAATTTTTGTATTTTTAGT  162
            ||||||||||||||||||||||.||||||  ||  ||.|||||    ||||||..|  |||||.||||||||||
Sbjct 3475  TCAGCCTCCTGAGTAGCTGGGACTACAGGCATG--CAACACCATGCCCAGCTGATT--TTTTTATATTTTTAGT  3544

Query  163  AGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTT  236
            |||||..||||||.|||||.||||.|||.|||||||||||||||||||||||..||.| |||||||||..||||
Sbjct 3545  AGAGAGGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAAATGAT-CGCCTGCCTCAGCTT  3617

Query  237  CCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT----------------------------  282
            ||||||||||||||||||.|||..|.||||||.|.||||||||  |                            
Sbjct 3618  CCCAAAGTGCTGGGATTACAGGCTTAAGCCACCGTGCCTGGCC--TGCCCAGGCTTTTTAAAAAATAGATTTTA  3689

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3690  TTTTTTAAGTCTTTGGTCCACATAACCACAGCCTCCCCTACTATCAACATCCCACACCAGAGCAGTACATTTGA  3763

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3764  CATATTCGACGCACCTAACTTGACACATCATTATCACTCAAAGTCCACAGCTTACTCTAGGGCTCGTTCTTGGC  3837

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3838  ATTGTGCATTCTGTGGGTTTTGACAAATGTATAATGACATGCGTCCACCATTGTAGTATCATCAGGAGTGGTGT  3911

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3912  CATGGCCCTATACATCCTTCATGTCTTAGGGATTTTTAAAGCCTAGTAAAAGACATCGGAAAAAAAAAAAAAAA  3985

Query  283  --  282
              
Sbjct 3986  AA  3987

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