Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_027501.1
- Aligned Length:
- 3121
- Identities:
- 239
- Gaps:
- 2855
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGATGTTCCCAGGACGCGAGCTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTTGGTGGGAAGGACCTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCCCCTTATAGAAACACTTTCTCCAGGCCGGGCCGGGCTTGGTAAACCTCAGCCGTGCCTGGGTAGAGGACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGGCTGGGCCGAGCGGGGGTGGAATGAGGGCGTCTAGAACAGAGAAAACTAAGATGGGGTCGTCCCCCCAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATCTGGAAAACAGTTACAGCAACAGGCTCCTCTCATCAGACGGCAGTGCTGGTCGTTTCCTCACTGGTTTGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGAAGGCTGGGCAGAAAAAGGATGCAACCTTGTTCTCAACCACTTGCTATCTCGTGATTCAGGGATTGGATGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCTCTATGGTTTGTTTTGCCCTGAAGAGCAGAAGGCTTCTGTCCCAACTGGTGTTGCCAAAGCAACATATTAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCATGCCATGATCCTGGGTCAAGATCTGCACAATCTGATTGGGCATGTCACCTCGGATGGCAAGGGAGTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTGGTCAAAATCATGGAGTCCCAGCTTTCGGAGACGCCTTGCAGCTGCCCGGTAACACTTCCAGGGTTGGGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCACAAGGAGGTAGTGGCAGAGGGAGGAAAGATGGGCCAGGAACTCCCATAGGCCATGGTCTCCATGATTCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGAATCCACATGGTTATTGACATGCAGAAGCCAATGTCAAAAACTGAACGTCCAAATTGGCTTAAGAAAGAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAAGAGAACCTTCCGGGTCCTTTGATTCATGAAGTCCAGGGTGATAAAAGTCAAGGCATCAGGAAAAGGACAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCTTTTTCGGCTCGCTTCACCAGGACTGGATCTATGTCGCAGCAGAGGAGACGGAATTCTCTTGAGGCATCTGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGGTTTCCCCGTCAGGTAGGGAGAGGAAGTGTTTGTATAGAGCCACACTCAGATCCTAGAGGAATCCAAAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCTTTGTCACTGCAGTTCTCAATCAGTGAATGGAAGAGAAATCTGTATCATTCTCCCACTGAGAATGCCACTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTCTGGCTGTATAGGATGTGAGGTTCCTAAACCATAACCTAAAGAGGTTGTGCAAAAATTTTCTACAGAGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGCTCTCAGTGCCCTCCAGGGGTCACATGCTGTAATGCATCATCCCCATATTTTCCTGACACTGATGATAGATT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGGTTGTATAGCTGAAAGTTACAGCCAAATGGATGCAGCAAAGGAACCTACAGCAGTATTTCCCAGCTTAAGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATATGCTGATAAACTCACTCTTTTTCTGGGTATCTCAAGACCCCAGGGCGGAAGAAAGGGGTCCAGAGGCATAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCAGTGTCTCTTACCAGGAAAGTGAGGAATACAGCAAGCACAATCTTACAAAAACCTGCTTCTCAGACCCGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGGGAAGTCTGGATTCCAAAGTCCTCATTCAGCCTTCACTAAAGCTTCAATTTTACTGTCTTAGGATTCACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCTCCTTCTGAGACATTCTGCTTCTATAACCATCATTGCTAAAAGTCACTGCTAACAACCTTCTAGACAAGTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAATGATTTGTGATTTTTACCACATTAGCACCTTTTTTACTCTTAAGTCACCATCTCCTTTCTCTAACTTTGAA 1628
Query 1 --------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCA 54
| |||||.|.||||||..|||||||||||||||||||||.|||||
Sbjct 1629 TTCTTTTTTTTTTTGAGACAA---AGTCTGGTTCTGTCGGCCAGGCTGGAGTGCAATGGCGTGATCT------- 1692
Query 55 CTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG--TGC 126
|.|||||||||||.|.||||||||||||||||||||||.|||||||||||.|||||||||||||||||| ||
Sbjct 1693 CAGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGCATG- 1765
Query 127 CCACCACCACAGCT-GGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTC 199
||.||||||| || .|||||||||||||||||||.|||||||.||||||.|||||.||||||||.|||||||.
Sbjct 1766 -CATCACCACA-CTCAGCTAATTTTTGTATTTTTATTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTT 1837
Query 200 GAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGC 273
.|| |||||||||.|||.|||.|||||||.|||.||||||||||||||||.|||||||.|||||||||||.|
Sbjct 1838 TAA---CTGACCTCAAGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGACTATAGGAATGAGCCACTGCAC 1908
Query 274 CTGGCC------ATT----------------------------------------------------------- 282
|||||| |||
Sbjct 1909 CTGGCCTCTTTGATTTCTATAACCATTATAACTAACTCAAATTTGTGTTTTTCCACATAGTATTTTCAAGGCAT 1982
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1983 TTTTCTGTTTACTACTTTGTTTGCTTGGTGTAACAAGCATGTGAGGAAAATATTTATTTATGCCTTTTCTGCAG 2056
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2057 GTGAAGAAAATGCACAATGGAAACCACCCAGATGTCCAGTGATAGTGGCATGGACAAATAAATGTGGTATAATC 2130
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2131 ATGAAGATAGAATACTAAATAGCAGTTAAAAAATGAAGGCACCCAGCTTGGTGCACAACATGGATGATTCTCAC 2204
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2205 AAATACATAATGTTGAGAAAAAAAGCAAGCCATAACAGAAAATATATGAAAAGCATCCATTTACATGAAGCTCA 2278
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2279 AAAATGGGTGAAATTAAAGTACATCATTCAGGGAAGAAAAACAGTACACTATAAAGAAAAGCAAGGAAACAACA 2352
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2353 GAAGGCTAGTTGTTACCTCTGGGTAGAGATAGAGGTTTATGAACAGGAAAAGGCATATAGGGGAAGTTGTGGGG 2426
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2427 TGCTGAAAATGTTTATTATTTATTTATTTATTTATTTTTGAGACAGGATCTTACTCTGTTTCCCAGGCTGGAGT 2500
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2501 ACAGTGGTGTGATCACTGCAACCTTGACTTCCCAGGCTCCAGAGATCCTCCTACTTCAGCCTTATGAGTAGCTG 2574
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2575 GAACCACAGGTGCACACCACCATGCCCAGCTAATTTTTGTATTTTTGGTAGGGATGAGATTTTGCCATGTTGCC 2648
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2649 CAGGCTGATCTCAAACTCCCGAGCTCAAGCAATCCACCAGCGTCAGTCTCTGAAAATGCTGGGATTACAGCGTC 2722
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2723 AGCCACTGCACCCAGCAGTTTTTTGGGTTTTTTGTTGTTGTTTTATTTGAGACAGGGTCTCACTTCGTCACCCA 2796
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2797 GGCTGGGGTATGTGGCACAATCAAGGCTCACTGCAGCCTCGACCTCCTGGGTTCAAGCGATCCTCCTCCCTCAG 2870
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2871 CTCTCTAAGTAGCTGGGACTACAGATGCCCACCACCACACCTGGCTAATTTTTTTTAGAGATGGGGTTTTGCCA 2944
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2945 TGTTGCCCAGGCTGGGAAAGGAGTTTTTAAAATTGAAAAAAAAAAGCACCCATAAATTATGGTACATCTATCCA 3018
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3019 ATGAAACATTAGGAAGCTGCTAAAAAAAGAATGTGGTGATATAAATAATCTCAGAATTAAAAGCTAAAAAAAAA 3092
Query 283 ------------- 282
Sbjct 3093 AAAAAAAAAAAAA 3105
