Nucleotide Global Alignment

Description

Query:
TRCN0000469746
Subject:
NR_027501.1
Aligned Length:
3121
Identities:
239
Gaps:
2855

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGATGTTCCCAGGACGCGAGCTAAGTCTGCCCGGCCGGCGCGCGCCGCTTCCGCTTTGGTGGGAAGGACCTCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCCCCCTTATAGAAACACTTTCTCCAGGCCGGGCCGGGCTTGGTAAACCTCAGCCGTGCCTGGGTAGAGGACG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGGGCTGGGCCGAGCGGGGGTGGAATGAGGGCGTCTAGAACAGAGAAAACTAAGATGGGGTCGTCCCCCCAGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATCTGGAAAACAGTTACAGCAACAGGCTCCTCTCATCAGACGGCAGTGCTGGTCGTTTCCTCACTGGTTTGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGGAAGGCTGGGCAGAAAAAGGATGCAACCTTGTTCTCAACCACTTGCTATCTCGTGATTCAGGGATTGGATGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTCTCTATGGTTTGTTTTGCCCTGAAGAGCAGAAGGCTTCTGTCCCAACTGGTGTTGCCAAAGCAACATATTAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCCATGCCATGATCCTGGGTCAAGATCTGCACAATCTGATTGGGCATGTCACCTCGGATGGCAAGGGAGTGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGTGGTCAAAATCATGGAGTCCCAGCTTTCGGAGACGCCTTGCAGCTGCCCGGTAACACTTCCAGGGTTGGGGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCCACAAGGAGGTAGTGGCAGAGGGAGGAAAGATGGGCCAGGAACTCCCATAGGCCATGGTCTCCATGATTCAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATGAATCCACATGGTTATTGACATGCAGAAGCCAATGTCAAAAACTGAACGTCCAAATTGGCTTAAGAAAGAGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCAAGAGAACCTTCCGGGTCCTTTGATTCATGAAGTCCAGGGTGATAAAAGTCAAGGCATCAGGAAAAGGACAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCTTTTTCGGCTCGCTTCACCAGGACTGGATCTATGTCGCAGCAGAGGAGACGGAATTCTCTTGAGGCATCTGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCAGGTTTCCCCGTCAGGTAGGGAGAGGAAGTGTTTGTATAGAGCCACACTCAGATCCTAGAGGAATCCAAAAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCTTTGTCACTGCAGTTCTCAATCAGTGAATGGAAGAGAAATCTGTATCATTCTCCCACTGAGAATGCCACTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCTCTGGCTGTATAGGATGTGAGGTTCCTAAACCATAACCTAAAGAGGTTGTGCAAAAATTTTCTACAGAGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGCTCTCAGTGCCCTCCAGGGGTCACATGCTGTAATGCATCATCCCCATATTTTCCTGACACTGATGATAGATT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGGTTGTATAGCTGAAAGTTACAGCCAAATGGATGCAGCAAAGGAACCTACAGCAGTATTTCCCAGCTTAAGTA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATATGCTGATAAACTCACTCTTTTTCTGGGTATCTCAAGACCCCAGGGCGGAAGAAAGGGGTCCAGAGGCATAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCAGTGTCTCTTACCAGGAAAGTGAGGAATACAGCAAGCACAATCTTACAAAAACCTGCTTCTCAGACCCGCGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGGGGAAGTCTGGATTCCAAAGTCCTCATTCAGCCTTCACTAAAGCTTCAATTTTACTGTCTTAGGATTCACC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ACCTCCTTCTGAGACATTCTGCTTCTATAACCATCATTGCTAAAAGTCACTGCTAACAACCTTCTAGACAAGTC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CAATGATTTGTGATTTTTACCACATTAGCACCTTTTTTACTCTTAAGTCACCATCTCCTTTCTCTAACTTTGAA  1628

Query    1  --------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCA  54
                                |   |||||.|.||||||..|||||||||||||||||||||.|||||       
Sbjct 1629  TTCTTTTTTTTTTTGAGACAA---AGTCTGGTTCTGTCGGCCAGGCTGGAGTGCAATGGCGTGATCT-------  1692

Query   55  CTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG--TGC  126
            |.|||||||||||.|.||||||||||||||||||||||.|||||||||||.||||||||||||||||||  || 
Sbjct 1693  CAGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGCATG-  1765

Query  127  CCACCACCACAGCT-GGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTC  199
             ||.||||||| || .|||||||||||||||||||.|||||||.||||||.|||||.||||||||.|||||||.
Sbjct 1766  -CATCACCACA-CTCAGCTAATTTTTGTATTTTTATTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTT  1837

Query  200  GAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGC  273
            .||   |||||||||.|||.|||.|||||||.|||.||||||||||||||||.|||||||.|||||||||||.|
Sbjct 1838  TAA---CTGACCTCAAGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGACTATAGGAATGAGCCACTGCAC  1908

Query  274  CTGGCC------ATT-----------------------------------------------------------  282
            ||||||      |||                                                           
Sbjct 1909  CTGGCCTCTTTGATTTCTATAACCATTATAACTAACTCAAATTTGTGTTTTTCCACATAGTATTTTCAAGGCAT  1982

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 1983  TTTTCTGTTTACTACTTTGTTTGCTTGGTGTAACAAGCATGTGAGGAAAATATTTATTTATGCCTTTTCTGCAG  2056

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2057  GTGAAGAAAATGCACAATGGAAACCACCCAGATGTCCAGTGATAGTGGCATGGACAAATAAATGTGGTATAATC  2130

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2131  ATGAAGATAGAATACTAAATAGCAGTTAAAAAATGAAGGCACCCAGCTTGGTGCACAACATGGATGATTCTCAC  2204

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2205  AAATACATAATGTTGAGAAAAAAAGCAAGCCATAACAGAAAATATATGAAAAGCATCCATTTACATGAAGCTCA  2278

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2279  AAAATGGGTGAAATTAAAGTACATCATTCAGGGAAGAAAAACAGTACACTATAAAGAAAAGCAAGGAAACAACA  2352

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2353  GAAGGCTAGTTGTTACCTCTGGGTAGAGATAGAGGTTTATGAACAGGAAAAGGCATATAGGGGAAGTTGTGGGG  2426

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2427  TGCTGAAAATGTTTATTATTTATTTATTTATTTATTTTTGAGACAGGATCTTACTCTGTTTCCCAGGCTGGAGT  2500

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2501  ACAGTGGTGTGATCACTGCAACCTTGACTTCCCAGGCTCCAGAGATCCTCCTACTTCAGCCTTATGAGTAGCTG  2574

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2575  GAACCACAGGTGCACACCACCATGCCCAGCTAATTTTTGTATTTTTGGTAGGGATGAGATTTTGCCATGTTGCC  2648

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2649  CAGGCTGATCTCAAACTCCCGAGCTCAAGCAATCCACCAGCGTCAGTCTCTGAAAATGCTGGGATTACAGCGTC  2722

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2723  AGCCACTGCACCCAGCAGTTTTTTGGGTTTTTTGTTGTTGTTTTATTTGAGACAGGGTCTCACTTCGTCACCCA  2796

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2797  GGCTGGGGTATGTGGCACAATCAAGGCTCACTGCAGCCTCGACCTCCTGGGTTCAAGCGATCCTCCTCCCTCAG  2870

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2871  CTCTCTAAGTAGCTGGGACTACAGATGCCCACCACCACACCTGGCTAATTTTTTTTAGAGATGGGGTTTTGCCA  2944

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 2945  TGTTGCCCAGGCTGGGAAAGGAGTTTTTAAAATTGAAAAAAAAAAGCACCCATAAATTATGGTACATCTATCCA  3018

Query  283  --------------------------------------------------------------------------  282
                                                                                      
Sbjct 3019  ATGAAACATTAGGAAGCTGCTAAAAAAAGAATGTGGTGATATAAATAATCTCAGAATTAAAAGCTAAAAAAAAA  3092

Query  283  -------------  282
                         
Sbjct 3093  AAAAAAAAAAAAA  3105

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