Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_028453.2
- Aligned Length:
- 6798
- Identities:
- 245
- Gaps:
- 6516
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACATTGCCTGAATAACTTATTGCAAGGAGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGATGAGGAGGAGAGGATGAGAATGGCAGAAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCTGGAAATATGGATGACAGTGGTTTTTTCTCTATTCAGAAATGAAAGATCATTTATATGCAATTATAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACACTGGTTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATATCAGATACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGATATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCACATCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGACATGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAATACCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAAAAATAATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTGGTAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATGCGTCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTTGTAGGACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAAATAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTTCTAAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCTTGGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTTTGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTCTTGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGTAAGTTGGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAGTATCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTACTTTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACCGTGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCCAGTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCCACAAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTTTGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCATGACTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGCGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGTGTGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CATGTGCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAACCCCTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTTCCTGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAAGTCTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTTTAATA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAGTTTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATGTAGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTCTGCTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTACTAATG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAAATATGTTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAAGTCAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGTACTTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTACAGAGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTTTCTTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGTTTCAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTTCCCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAAATCCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGAAATTTCAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACACATTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATCAGGGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTATTTAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GATTATAAAATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTCTGAAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTCCCTTACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCAGAAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATTATAAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAAATATT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTAAGACTGAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATTACCTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTTCCATTGAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAGAAAAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAATATGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAAGAAAA 3034
Query 1 --------------------------------------------------------------ATGGAGTCTTGC 12
|.||||||||||
Sbjct 3035 TATGGCATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGTCTTGC 3108
Query 13 TCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATT 86
|.||||.||||||||||||.|||.||||..||||||..||||||.||||.||..|.|.||.|||||||||.|||
Sbjct 3109 TATGTCTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAGCAATT 3182
Query 87 CTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTA 160
||||||.||||||||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||||||||||.
Sbjct 3183 CTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTATTTTTG 3256
Query 161 GTAGAGACTGGGTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGG 233
||||||||..|||||.|.||| .||||||||.|||||||||||||||||||||||||||.||||||||||||||
Sbjct 3257 GTAGAGACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTTGG 3330
Query 234 CTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT---------------- 282
|.||||||||||.||||||||.|||..|||||||||||||||||||| ||
Sbjct 3331 CCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGAGCTGA 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 GCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGATCCAGA 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 AGCACTAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTAATTGA 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 TTGGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCTATAGT 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 TTATACATCAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAGAACTG 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 TCCTGCTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATATTTAAA 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 CTATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAGTAGAA 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 GTTTAAGCCTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTTAAAAT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 TCAGAATAGTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCAGTAAT 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 ATAAACTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTCACAGA 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 ATATTTTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGATGCCA 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 AAGTAAATGAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATATTGTTT 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 AATATTAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTTTTGAT 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 ACTATTTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCC 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 GAAGTGGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTACTAAAA 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 ACTACAAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGAGAATT 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 GCTTGAACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAGAGTGA 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 GACTCTGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCCATTGG 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 ACCTGTACAGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAAAATAA 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 ATCTTGATGTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTGGCTCA 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 CGCCTGTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAGTCTGG 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 GCAACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTAATCCC 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 AGCTACTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCACTGCA 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 TTCCAGCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATGTGTGT 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 ATATATATATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGCCTGTA 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 ATCCCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCAACATG 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 GTGAAACCCCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAGTTACT 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 TGGGAGGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCATTGCA 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 CTCTAGCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACGAAGAG 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 GCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTAGCTCT 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 GCTGCCCAGGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTC 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 CTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTTTTAGT 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 AGAGACGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCA 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 AAGTGCTGGGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTTGTTGT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 ATCGAGTCCTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCATGTCAG 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 CAATGTAAATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACCAGCAT 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 CTTTTTGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTTCTAAT 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 TTGCTTTCATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTTGAAGA 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 AAATCTTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTTCTAAA 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 TTTGTCGTAATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGCAATGA 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 GAAACATTAGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAGTTCAA 6364
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6365 GGAATGTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGTGATTA 6438
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6439 TCTAATTTTTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGAAATTC 6512
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6513 AAGTACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGCCGCTT 6586
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6587 GCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACACACAG 6660
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6661 GCCTTCCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAGTGTGG 6734
Query 283 ---------------------------------------------------------------- 282
Sbjct 6735 ATGTTCAATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6798
