Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- NR_028466.2
- Aligned Length:
- 6433
- Identities:
- 245
- Gaps:
- 6151
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGGGGCCGTTGGCTCCAGACAAATAAACATGGAGTCCATCTTCCACGAGAAAGTTATTCTATATTTGTCGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGGGTGATCTGCCAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACTTATTGGAGAAGAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAATGATGGCTCAGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTGACATGGAAGATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCTCAAGATATGACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTGAAAAACAGCAGCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTATCAGGACAGAGTTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCTATGAGTGAAGAAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTTGAAAACAGAAGGAAAAAAATAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCTTTAAAAAATAATTTAGATATTCATACTTTCCAACATTATCCTGTGTGATTACAGCATAGGGTCCACTTTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTAATGTGTCAAAGAGATGAGGAAATAAGACTTTTAGCGGTTTGCAAACAAAATGATGGGAAAGTGGAACAATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGTCGGTTGTAGGACTAAATAATGATCTTCCAAATATTAGCCAAAGAGGCATTCAGCAATTAAAGACATTTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATAGTTTTCTAAATGTTTCTTTTTCTTTTTTGAGTGTGCAATATGTAACATGTCTAAAGTTAGGGCATTTTTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGATCTTTTTGCAGACTAGCTAATTAGCTCTCGCCTCAGGCTTTTTCCATATAGTTTGTTTTCTTTTTCTGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTAGGTAAGTTGGCTCACATCATGTAATAGTGGCTTTCATTTCTTATTAACCAAATTAACCTTTCAGGAAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATCTCTACTTTCCTGATGTTGATAATAGTAATGGTTCTAGAAGGATGAACAGTTCTCCCTTCAACTGTATACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGTGCTCCAGTGTTTTCTTGTGTTGTTTTCTCTGATCACAACTTTTCTGCTACCTGGTTTTCATTATTTTCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAATTCTTTTGAAAGATGGTAATCTTTTCTGAGGTTTAGCGTTTTAAGCCCTACGATGGGATCATTATTTCAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACTGGTGCGTTCCTAAACTCTGAAATCAGCCTTGCACAAGTACTTGAGAATAAATGAGCATTTTTTAAAATGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGAGCATGTGCTTTCCCAGATGCTTTATGAATGTCTTTTCACTTATATCAAAACCTTACAGCTTTGTTGCAAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCTTCTTCCTGCGCCTTATTTTTTCCTTTCTTCTCCAATTGAGAAAACTAGGAGAAGCATAGTATGCAGGCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTCTCCTTCTGTTAGAAGACTAAACATACGTACCCACCATGAATGTATGATACATGAAATTTGGCCTTCAATTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAATAGCAGTTTTATTTTATTTTTTCTCCTATGACTGGAGCTTTGTGTTCTCTTTACAGTTGAGTCATGGAATG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TAGGTGTCTGCTTCACATCTTTTAGTAGGTATAGCTTGTCAAAGATGGTGATCTGGAACATGAAAATAATTTAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAATGAAAATATGTTTAAATTTATACTGTGATTTGACACTTGCATCATGTTTAGATAGCTTAAGAACAATGGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTCACAGTACTTAGTGGATCTATAAATAAGAAAGTCCATAGTTTTGATAAATATTCTCTTTAATTGAGATGTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGAGAGTTTCTTGCTGGGTCAATAGGATAGTATCATTTTGGTGAAAACCATGTCTCTGAAATTGATGTTTTAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCAGTGTTCCCTATCCCTCATTCTCCATCTCCTTTTGAAGCTCTTTTGAATGTTGAATTGTTCATAAGCTAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATCCAAGAAATTTCAGCTGACAACTTCGAAAATTATAATATGGTATATTGCCCTCCTGGTGTGTGGCTGCACAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTTTATCAGGGAAAGTTTTTTGATCTAGGATTTATTGCTAACTAACTGAAAAGAGAAGAAAAAATATCTTTTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTTATGATTATAAAATAGCTTTTTCTTCGATATAACAGATTTTTTAAGTCATTATTTTGTGCCAATCAGTTTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGAAGTTTCCCTTACACAAAAGGATAGCTTTATTTTAAAATCTAAAGTTTCTTTTAATAGTTAAAAATGTTTCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GAAGAATTATAAAACTTTAAAACTGCAAGGGATGTTGGAGTTTAGTACTACTCCCTCAAGATTTAAAAAGCTAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATATTTTAAGACTGAACATTTATGTTAATTATTACCAGTGTGTTTGTCATATTTTCCATGGATATTTGTTCATT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACCTTTTTCCATTGAAAAGTTACATTAAACTTTTCATACACTTGAATTGATGAGCTACCTAATATAAAAATGAG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAAACCAATATGCATTTTAAAGTTTTAACTTTAGAGTTTATAAAGTTCATATATACCCTAGTTAAAGCACTTAA 2664
Query 1 -------------------------------------------------------------------ATGGAGT 7
|.|||||
Sbjct 2665 GAAAATATGGCATGTTTGACTTTTAGTTCCTAGAGAGTTTTTGTTTTTGTTTTTGTTTTTTTTTGAGACGGAGT 2738
Query 8 CTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAG 81
||||||.||||.||||||||||||.|||.||||..||||||..||||||.||||.||..|.|.||.||||||||
Sbjct 2739 CTTGCTATGTCTCCCAGGCTGGAGGGCAGTGGCATGATCTCGGCTCACTACAACTTCCACCTCCCGGGTTCAAG 2812
Query 82 CGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTAT 155
|.|||||||||.||||||||||.|||||||||||||||||||.|||||||||||||.|.|||..||||||||||
Sbjct 2813 CAATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGCCCACCACCACACCCGGCAGATTTTTGTAT 2886
Query 156 TTTTAGTAGAGACTGGGTTTTACCAT-ATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGC 228
||||.||||||||..|||||.|.||| .||||||||.|||||||||||||||||||||||||||.|||||||||
Sbjct 2887 TTTTGGTAGAGACGCGGTTTCATCATGTTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGC 2960
Query 229 CTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCA---------TT----------- 282
||||||.||||||||||.||||||||.|||..|||||||||||||||||||| ||
Sbjct 2961 CTTGGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGCCTGGCCAGCTAGAGAGTTTTTAAAGCAGA 3034
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3035 GCTGAGCACACACTGGATGCGTTTGAATGTGTTTGTGTAGTTTGTTGTGAAATTGTTACATTTAGCAGGCAGAT 3108
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3109 CCAGAAGCACTAGTGAACTGTCATCTTGGTGGGGTTGGCTTAAATTTAATTGACTGTTTAGATTCCATTTCTTA 3182
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3183 ATTGATTGGCCAGTATGAAAAGATGCCAGTGCAAGTAACCATAGTATCAAAAAAGTTAAAAATTATTCAAAGCT 3256
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3257 ATAGTTTATACATCAGGTACTGCCATTTACTGTAAACCACCTGCAAGAAAGTCAGGAACAACTAAATTCACAAG 3330
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3331 AACTGTCCTGCTAAGAAGTGTATTAAAGATTTCCATTTTGTTTTACTAATTGGGAACATCTTAATGTTTAATAT 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 TTAAACTATTGGTATCATTTTTCTAATGTATAATTTGTATTACTGGGATCAAGTATGTACAGTGGTGATGCTAG 3478
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3479 TAGAAGTTTAAGCCTTGGAAATACCACTTTCATATTTTCAGATGTCATGGATTTAATGAGTAATTTATGTTTTT 3552
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3553 AAAATTCAGAATAGTTAATCTCTGATCTAAAACCATCAATCTATGTTTTTTACGGTAATCATGTAAATATTTCA 3626
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3627 GTAATATAAACTGTTTGAAAAGGCTGCTGCAGGTAAACTCTATACTAGGATCTTGGCCAAATAATTTACAATTC 3700
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3701 ACAGAATATTTTATTTAAGGTGGTGCTTTTTTTTTTTGTCCTTAAAACTTGATTTTTCTTAACTTTATTCATGA 3774
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3775 TGCCAAAGTAAATGAGGAAAAAAACTCAAAACCAGTTGAGTATCATTGCAGACAAAACTACCAGTAGTCCATAT 3848
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3849 TGTTTAATATTAAGTTGAATAAAATAAATTTTATTTCAGTCAGAGCCTAAATCACATTTTGATTGTCTGAATTT 3922
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3923 TTGATACTATTTTTAAAATCATGCTAGTGGCGGCTGGGCGTGGTAGCTCACGCCTGTAATCCCAGCATTTTGGG 3996
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3997 AGGCCGAAGTGGGTGGATCACGAGGTCGGGAGTTCGAGACCAGCTTGGCCAAAATGGTGAAACCCCATCTGTAC 4070
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4071 TAAAAACTACAAAAATTAGCTGGGCGCGGTGGCAGGTGCCTGTAATCCCAGCTACCTGGGAGTCTGAGGCAGGA 4144
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4145 GAATTGCTTGAACCCTGGCGACAGAGGATGCAGTGAGCCAAGATGGTGCCACTGTACTCCAGACTGGGCGACAG 4218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4219 AGTGAGACTCTGTCTCAAAAAAAAAAAAAAAATCATGCTAGTGCCAAGAGCTACTAAATTCTTAAAACCGGCCC 4292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4293 ATTGGACCTGTACAGATAAAAAATAGATTCAGTGCATAATCAAAATATGATAATTTTAAAATCTTAAGTAGAAA 4366
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4367 AATAAATCTTGATGTTTTAAATTCTTACGAGGATTCAATAGTTAATATTGATGATCTCCCGGCTGGGTGCAGTG 4440
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4441 GCTCACGCCTGTAATCCCAGCAGTTCTGGAGGCTGAGGTGGGCGAATCACTTCAGGCCAGGAGTTCAAGACCAG 4514
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4515 TCTGGGCAACATGGTGAAACCTCGTTTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTTGCACACACTTGTA 4588
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4589 ATCCCAGCTACTCAGGAGGCTAAGAATCGCATGAGCCTAGGAGGCAGAGGTTGCAGAGTGCCAAGGGCTCACCA 4662
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4663 CTGCATTCCAGCCTGCCCAACAGAGTGAGACACTGTTTCTGAAAAAAAAAAATATATATATATATATATATATG 4736
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4737 TGTGTATATATATATGTATATATATATGACTTCCTATTAAAAACTTTATCCCAGTCGGGGGCAGTGGCTCACGC 4810
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4811 CTGTAATCCCAACACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAAGTCCGGAGTTTGAGACCAGCCTGGCCA 4884
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4885 ACATGGTGAAACCCCATCTCTACTAAAAATACAAAACTTAAGCCAGGTATGGTGGCGGGCACCTGTAATCCCAG 4958
Query 283 -------------------------------------------------------------------------- 282
Sbjct 4959 TTACTTGGGAGGCTGAGGCAGGAGAATCGTTTAAACCCAGGAGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCA 5032
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5033 TTGCACTCTAGCCTGGGCAACAAGAGTAAAACTCCATCTTAAAGGTTTGTTTGTTTTTTTTTAATCCGGAAACG 5106
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5107 AAGAGGCGTTGGGCCGCTATTTTCTTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCTGAGACGGAGTCTA 5180
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5181 GCTCTGCTGCCCAGGCTGGAGTACAATGACACGATGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGA 5254
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5255 TTCTCCTGCCTCAGCCTCCCAAGTACCTGGGATTACAGGCACCTGCCACTACACCTGGCGAATATTTGTTTTTT 5328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5329 TTAGTAGAGACGGGCTTTTACCATGTTAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGCCTTGGCC 5402
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5403 TCCCAAAGTGCTGGGATTACAGGTGCAGGCCACCACACCCGGCCTTGGGCCACTGTTTTCAAAGTGAATTGTTT 5476
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5477 GTTGTATCGAGTCCTTAAGTATGGATATATATGTGACCCTAATTAAGAACTACCAGATTGGATCAACTAATCAT 5550
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5551 GTCAGCAATGTAAATAACTTTATTTTTCATATTCAAAATAAAAACTTTCTTTTATTTCTGGCCCCTTTATAACC 5624
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5625 AGCATCTTTTTGCTTTAAAAAATGACCTGGCTTTGTATTTTTTTAGTCTTAAACATAATAAAAATATTTTTGTT 5698
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5699 CTAATTTGCTTTCATGAGTGAAGATTATTGACATCGTTGGTAAATTCTAGAATTTTGATTTTGTTTTTTAATTT 5772
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5773 GAAGAAAATCTTTGCTATTATTATTTTTTCCAAGTGGTCTGGCATTTTAAGAATTAGTGCTAATAACGTAACTT 5846
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5847 CTAAATTTGTCGTAATTGGCATGTTTAATAGCATATCAAAAAACATTTTAAGCCTGTGGATTCATAGACAAAGC 5920
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5921 AATGAGAAACATTAGTAAAATATAAATGGATATTCCTGATGCATTTAGGAAGCTCTCAATTGTCTCTTGCATAG 5994
Query 283 -------------------------------------------------------------------------- 282
Sbjct 5995 TTCAAGGAATGTTTTCTGAATTTTTTTAATGCTTTTTTTTTTTTTGAAAGAGGAAAACATACATTTTTAAATGT 6068
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6069 GATTATCTAATTTTTACAACACTGGGCTATTAGGAATAACTTTTTAAAAATTACTGTTCTGTATAAATATTTGA 6142
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6143 AATTCAAGTACAGAAAATATCTGAAACAAAAAGCATTGTTGTTTGGCCATGATACAAGTGCACTGTGGCAGTGC 6216
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6217 CGCTTGCTCAGGACCCAGCCCTGCAGCCCTTCTGTGTGTGCTCCCTCGTTAAGTTCATTTGCTGTTATTACACA 6290
Query 283 -------------------------------------------------------------------------- 282
Sbjct 6291 CACAGGCCTTCCTGTCTGGTCGTTAGAAAAGCCGGGCTTCCAAAGCACTGTTGAACACAGGATTCTGTTGTTAG 6364
Query 283 --------------------------------------------------------------------- 282
Sbjct 6365 TGTGGATGTTCAATGAGTTGTATTTTAAATATCAAAGATTATTAAATAAAGATAATGTTTGCTTTTCTA 6433
