Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_001741633.1
- Aligned Length:
- 2688
- Identities:
- 239
- Gaps:
- 2418
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCACAGGCGGGGCCTCGGACCCCGCCCTCCGCCTTCCCCGGGATTCCGTGCTGTGCGGGCCGGGCGCTGGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGATTGAGATTCATGGACTATCTGCCATGCCCCAAACACCAGGCAGAGTGCTAAGGGGACACAAAGATGAATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGATGTGACCCCTGCTCTCTAGGATCCTGTCGCATAGATGAAGAGATAGAACATATCCATAAAAAGATAACTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGACCGACATTGCGTGCTGCCGACACGTGTTATGGTCCTGCGGGCTACAGAAATTCAGAGGAGGAAGACAGATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTGCAGTGTGGCAGCTGCTCCTCGGGCACTTACAGGAGCTTGTTAGGATGAGGACAGAAGACTTCATAGCACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGGGAACTGTGACACCAGCTTTATATCACACGATAGAAAATACCCAGTTCTGTGAGTTGACTGGGCATTCTGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCACAAGGTGTGGCTGGGCACTGGAACAGCCGAAGTCACCTGGGAGCTGACTGGGTTGGACTGTCCAGGATGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCACTCCTACGACAGTGGATGCTCAACTGGGGCTGTCAACTGGAGCCCCCATAGGTAACATCTCCCAGCATGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGCTCTGTTCCAAGAGGGAGTGCCGCATGAGAATCAGGAAGCAGCTGCAAGGTTCCTCATGGTTTTGCCTTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGACACCCAGAGTTGTTTCAGCCTCATTCTGTTTGTCAACAGGTCACTGTTTCAAGGAGGAGGGGAACTAGAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCAGCTCTTGATGAAAGCAGTGATAAGGAATTTGCAGTTCTAGTTGATCTACTGCAGCTTTCATGGTGTTTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCATATACTGATTATATAATAGTATTTGTCACCTTTTGCCAAGCGCCACGTATTACAATTAAGTGTCTCTTTA 888
Query 1 ------------------------------------------------------------------ATGGAGTC 8
|..||||.
Sbjct 889 TCTCACAGGCTAGATTTTCAACTTCTGGTGAGAGATTGCATTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTT 962
Query 9 TTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGC 82
|||||.|||||||||||||.||||||| ||||||||..||||||||||||||.|| |.||.|||||||||
Sbjct 963 TTGCTGTGTCACCCAGGCTAGAGTGCA-----GCGATCTCGGCTCACTGCAACCTCCGC-TCCCGGGTTCAAGC 1030
Query 83 GATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAG-CTGGCTAATTTTTGTAT 155
||||||.|||.||||||||||.|.|||.|||||||||||||||||..|||| | |.||||||||||.||||
Sbjct 1031 GATTCTTCTGCCTCAGCCTCCCGGGTAACTGGGATTACAGGTGCCTGCCAC----GCCCGGCTAATTTTCGTAT 1100
Query 156 TTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCC 229
|||||||||||||.||||||.|||||.||||||||.||||||||||||||||||||||| ||.|||.||..||
Sbjct 1101 TTTTAGTAGAGACAGGGTTTCACCATCTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA--TGATCCACCCACC 1172
Query 230 TTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC-----ATT---------------- 282
|||||.|||||||||||||||||||.|||.|||||||||||||||.|||| |||
Sbjct 1173 TTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACTGCGCCCGGCCGAGAGATTGCATTTTATTTAACCC 1246
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1247 AATTCTTTCAGTGACATAGCTATAATAACAATAAAGATGTATTAAGTTCCTCTACCATGTGTTTGATCCCATCT 1320
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1321 AATTGAACACATGATCTTATCTCATCCCTACCCTGATAGAATAGACGTCTCATTTTCCAGATTGGGAACTGAGG 1394
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1395 CACAGAAAGATTCAGCTTTGCCCAAAAACCACATAATGGACAAGTGGCAGAGCCAGGATTTGAACCACTTAAGA 1468
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1469 GCCTGTGTTTTTATTCTCTCTCTTCTAGTGCCATCTCACAGTCTTGGCACCATCTTAGTAGCTTCAGGCTGCTA 1542
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1543 TAAAAAGTTACCATAGGCTGGATGGCTTAAGCAACAGACATTTATTTCTCATGCTTATGGAGGCTGGGAAGTTC 1616
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1617 AGGATCCAGGTGGAGGCTGACCCCATGTCTTTCTGGGAGGTCCAGCTGCTCCTGGACCAGATAGTGCCAACACA 1690
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1691 ATACTTCTCATTGTGTTATGATTGCCTACAGCAGGTGAAGGCCTGCTTCCTGTTTTCCAGATGGCCGTCTTCTC 1764
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1765 ATTGTATCTTAACATGGTGGAAGGAGAATGAGAAAGCTCGCTTGTGTCTCTTTTTATAAGGGCACTAATCCAGA 1838
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1839 CGCGGAGGGCTCACCTTTACAACAGCTAAACCTGATCACCCCCCAGAGGCCCCATCTCCAAATACCATCACATT 1912
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1913 GGGGATTGTGCTTTGACATATGAATGTGGGAGGACACGAGCATTCAGTCCATAACAGGCACCAAGGCACCAAGT 1986
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1987 CAGTCTGCACAAGTGTGTCGCTGGGCAGAAGAACAAAAGAGAAGGAAGAAGAAAGAACACAGTACAGAAAGTGA 2060
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2061 GTGGCGGTACCACAAAGAGTCATCAGCAAGTGCTGATGGTGGCTCCGGCCAGCACATTCCAAGCATCCTTGGGT 2134
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2135 AGCCTGATAAATGGAGTGCAGAATGTTCGGTAGCTCTGCAAGGAGTGGGAGTATTTATTGGGTCTGAGTGCTTG 2208
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2209 ATGCGAAACTTTCCTCCAAAGTTCCAATTTTCTATCCGCCAAGATAAGTGATGGAGGTTTATGGTTCATGTTGT 2282
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2283 AGCACATCCACCCAGGCCAAGGACCTACAACTCTGAATTTCTGGCCTGCCTCCTTCCAGCTAGAAGTGAATCTA 2356
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2357 GATTTACATGCCATCAGGAACAAGCATCGTCTTCCTGTTCTGTGAGTTCCTAGTTGTAGTAGGTACTGCTTTCA 2430
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2431 TCCTGAGAATATCAATCTACATGCACAAGGTCCCTCTCTGTGGAGGAGTAGGTACTTAAACCCAAGATAAGTGG 2504
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2505 AAACTTTATATCCAAGGAGACAGAAAATAAAATTTCAGTATGTTTTATATTAAACAACTTATTATACTTCTATC 2578
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2579 CTTTTATGAACATAAGGTCATCAGTAGGCCAAAAGTCTGAAAACAGTCTCAGTTCCTCAATGTGAATGCAAACC 2652
Query 283 ------------------------ 282
Sbjct 2653 ATTAGTGCAAAAAAAAAAAAAAAA 2676
