Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_001744739.2
- Aligned Length:
- 2406
- Identities:
- 244
- Gaps:
- 2126
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCACGACCACGCTGCTTACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTGACAAGCCTGCTGCTGGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAGGGTGAAACCAGGAGAGATTGCTTGCTTCACTTGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGTTGGAAGGTGGCTAATCTTTGATTCTATGTTTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGAGCACACTGATAGAAATCCTTGTGTCCAGTGCCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACAGGCGCCCGCCACCACGCCTGGCTAACTTTTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GATGGTCTTGATCTCTTGACCTTGTGATCCACCTGCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTGCGCCCAGCATGTTAGACAATTTTTAATTCATCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCTGGTGGGGACAAGGTTACAGAGTTGCTGAGAGGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGGGGGGCGGGGACTCCGCACATGCCTGTGATGTCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCCTGTTGACTTTCCCACACTCCTGTAACCCTCCCTCCCTCCCTTCTTCCTCTCTCTCTCTCTCACTCACGCAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACGCACACACACACACACACACACACACACACACACTCCATTCTCTGTCTCCATGACTCTGGAGTAAACTAACG 1850
Query 1 -----------------------------------------------------------ATGGAGTCTTGCTCT 15
|.||.||||.|||||
Sbjct 1851 TCTCGAGTTGCCATTGGAAGCCCCATTGTCCTCATTTTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCT 1924
Query 16 GTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTC 89
|||.||||||||||||||||.|||.||||||||..|.|||||||.||||.||.|.|.|||||||||||||||||
Sbjct 1925 GTCCCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCCCACTGCAGCCTCCGCCTCCTAGGTTCAAGCGATTCTC 1998
Query 90 CTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGT-ATTTTTAGT 162
|||.||||.|||||||||||||||.|||.|.||||||||.||||||||.|.|.||||||||||| .||||||||
Sbjct 1999 CTGCCTCACCCTCCTGAGTAGCTGTGATCATAGGTGCCCGCCACCACACCCGACTAATTTTTGTGTTTTTTAGT 2072
Query 163 AGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTT 236
||||||.||||||.||.||.||||||||.||||||||.||||||||||||||||||.||||||..|||||||.|
Sbjct 2073 AGAGACAGGGTTTCACTATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCT 2146
Query 237 CCCAAAGTGCTGGGATTATAGGAGTGAGCCAC--TGC---GCCTGGCCATT----------------------- 282
||||||||||||||||||.||||||||||||| ||| |||| ||.||
Sbjct 2147 CCCAAAGTGCTGGGATTACAGGAGTGAGCCACCATGCCCAGCCT--CCGTTGTCCTCATTTAGACTTTCATGGG 2218
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2219 TTATAGGCACTTTTGACTTCCTGGGGTCCTTCTTCAGTTAAAAAAAAAAATTAGAAAATTAGGCCGGGCGTGGT 2292
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2293 GGCACATGCCTGTAATCCCAGCACTTTATGAGGCCGAGGTGGGAGGATCACCTGAGGTCGGGAGTTCAAGACCA 2366
Query 283 -------------------------------------- 282
Sbjct 2367 GCCTGACCAATGTGGAGAAACCCCGTCCCTACTAAAAA 2404
