Nucleotide Global Alignment
Description
- Query:
- TRCN0000469746
- Subject:
- XR_001749101.1
- Aligned Length:
- 3501
- Identities:
- 245
- Gaps:
- 3219
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGGCGGCCGCACCTTGCTGCCTCCCTCTTGCAGCTCTCTGACGATGCAGCGACCGCGGCTGGCGGAGATTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAACGGGGAAAGGTGGACATCCAAAGGTGATACAGCTGGAAAAAGGATCTTCATCCAAGACAAAGAGAAACAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTCGATAGGAAAGTGATGAAAGGCATCAAGCAAAGTGAAGATGCAAATGAGAAAACAAGATCAGAAGACAGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATATCTGAAACAAGTCACAAATGCATAGTATGACCTCTCAGGTAAGGACCAGGGCTGGATCATCCCAGGATGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGGCATACTCTCAGGGGGCGCTGTGTTATACTGAGATCTTGCTAGGCAAAAACATGGTTTTTGTCTTTTCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGAAAAGGTACCTTTTGGGAGGCCAGGCGCGGTGGCTTACTCCTGTAATCCCAGCACTTTGGGAGGCTGAGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCGGATCACCTGAGGTAGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCTTCTCTACTAAAAATA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAAATTAGCCAGGTGTGGTGGCACATGCCTGTAATGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACTCAGGAGGTGGAGGTGGCGGTGAGCCGAGATCATGCCATTGCACTCCAGCTTGAGCAAAAAGAGCAAAATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCGTCTCAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAAGAAAAAGAAAAGAAAAGGTACCTTTTGGGAAGAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTAAAAAAATTTTTTTTTTCCGCTGGCAGTATTTAGGAAGAAGAATTCTATTTATTACTTCAGTAGAGTAAC 814
Query 1 ------------------------------------------------------ATGGAGTCTTGCTCTGTCAC 20
|..||||||..||||||..|
Sbjct 815 ATGCTTTACTAAAATAAGCTTCCATTCTACATGGTTTTTTTTTTTTTTTTTTAGACAGAGTCTCACTCTGTTGC 888
Query 21 CCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTC 94
|||||||||||||||.|||.||||||||..|||||||||||||||||.|.|..|||||.||.|.||||||||.|
Sbjct 889 CCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCGAGTGTTTCTCCTGCC 962
Query 95 TCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCACCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGAC 168
|||||||||.||||||||||||.||||||.|..||||||||||.|.||||||||||||||.|||||||||||||
Sbjct 963 TCAGCCTCCCGAGTAGCTGGGACTACAGGAGTACACCACCACACCCGGCTAATTTTTGTAATTTTAGTAGAGAC 1036
Query 169 TGGG-TTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAA 241
.||| |||.||||||||||.|||.|||||||||||||||||||||||||||.|||.|||||||||||.||||||
Sbjct 1037 GGGGATTTCACCATATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAA 1110
Query 242 AGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCC----ATT----------------------------- 282
|||||||||||||.|||..|||.||||||||||||||| |||
Sbjct 1111 AGTGCTGGGATTACAGGCATGAACCACTGCGCCTGGCCCATGATTGTTCTTAAAATAAGAAACACCACATAATA 1184
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1185 TTCAGTGTTCCTTATTTTGAAGGGCTCTTTATTTGGTTATATTTTAGGCATATGAAGCTATTTCATAATCCCAA 1258
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1259 AAGGGGTATTTAATGAGATTTAGAATTGATAGTCTTCTGTTGATATATATTTATAGTTATTTATACACATATTT 1332
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1333 GTATGTTCTTAAAATAAAATGTTCAAAGTTTTTGATTCAAATGTAACATGTCTAAAATTGAAATCATTGTTTTT 1406
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1407 TTGTTTTTTTTTTTTCACAACTCAAACCCTCTTCTTTTCCCATAAACACCATATTGGGAAATGGCACCACCATG 1480
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1481 GGCATAGTTGCTCAAGCTAGAAGGATGGGGGTATTTTGGCTCATCCCCTTCACTCTTCACATCTAATTAATTCC 1554
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1555 CTCTTTTGAGTAACATTTACTAAGTGCCAGGCCTTCTGCTAGTCTTTCGTGAAGCTTGGAGTTAGAGTGAGAGA 1628
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1629 CCGATATTACTCAAATGATCTTGCCAGTGAATGTACAAGTTACAGGTGGAGATAAGTGCTCTGCAGAAAGGAGC 1702
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1703 ATGACTCTTGTGAGAGAAACAGAAGACCATGTTCTGAACTGGGAATCAAGGAAGACTTCCCTGAGGACGTGACC 1776
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1777 CTTGTTTGGACTCTATTCTGTTTATGCTAAGGATTTTAATAAGGAGCAGGTGATGGACATGATCCAGCGTACAT 1850
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1851 TTTTAGAGGAATATCATGAGTCCTATCACTTCATCTCCTAAATATTTCTGACATCTGTTCTCTTTCCTCCATCC 1924
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1925 TCACGACCTTCACTGGCATGGGCCTCCAACAGCTCACTGTGGGGGAAGTTTCCCTCAAAGGGCACTGATAACAC 1998
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1999 ATCTTATTAAAACTATACCACATCATTATACCTCCCCAACATAATATGTACATGTATGTATTTGACAATAATAT 2072
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2073 ATATGTATTACTGTCCTATTTATTATATACATTAAAAACATTCACAAAAAATTAAAAATCCAAATGGTAAGATT 2146
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2147 TTACATTTTTGATTTGATAACAATACTTTATTATATTACTAAACATATATTCCTAATTGTCACTAAGATATTAT 2220
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2221 CATGTTAGAGAAATTTGCTTCACTATACTATATCATTTTTTTAAATCTTAGTTTAATACTCTCTGATACAGCAA 2294
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2295 TTCACAAGTCTACTTCCAACTCTGGCTTATTTTGATTCTTTCATGTAATGGCTGTCATAGCTGAAAAGGGACCT 2368
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2369 CACAGAGACCCAATGGAGGCAGTGTCCTATTGGCTATACTTCCCAAATCAAGCCATTCATTTCTCAATCCCATT 2442
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2443 CACTAATTTACAGAGATTTACTTATTTTTCATTGCTAGTCTGCAAATGTACACTTAAATGAAGGTCATCCTTAA 2516
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2517 TAATTATGAATGTGAACCCATGAAACCTACTTCATAATTCTGAATTTGTTTTGACAGATTCTTTTCCACAGTTA 2590
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2591 GAGGGCCATTGCTATACCTGACATTGTGGCTGACAAAAGAGCTCTTATTAGGACTGGAAGTGTCAGTTCTACTT 2664
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2665 TTTCTTCTTTCTTTATGCTCATGTTATTATTATTTTTTAAATCTGAAGTTTAGAGGAATCTTTTAACTCTACTT 2738
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2739 GTCTATTTGGGAAGACACACTAAACTAGATAATATAATTTATAAATTCCCTCAACTAAGCACACAGAACTGTAA 2812
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2813 TACATTGAAATCTGCCAAAGAGAACAAATCAGTGAGGGCACGACTGTATTCCTTTGTGTCTTTTTCAAGACACC 2886
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2887 TTGAGTACTGTAAGTGACAGGGAGCCATCTGATGTACAGGCTGAAGGGGGCCACCATCAACCTAGTAACCTAAA 2960
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2961 CAGAAGTTCCAATATTTTCACCCTGCAGTCCACTTTGTAACCTTTTCTTAGCCTTCCACAAGAGTCTCCTAACT 3034
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3035 GGACTCCCTCCATCCACTTCTGGGCACCTAATGTCTCTACTACAGATTAGAAATTACTTTCACAGAAGGCCATT 3108
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3109 TCTGAAACCCAAACTAGCTTATGTGTTACCCTACATTGAAATTATTCAGACGCTGTCTTCCCCAGTAATCTGCA 3182
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3183 AGTTTCACAAAGGTAGATGCCATGTTCTTAATGGTTTCCCAGCACATAGCACATAACAGAAGCTCAATAAATAT 3256
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3257 TTGTTGAATGAATAAATGAGTAAACAGAATATTTTTACAGTTAAATACCTTTAATTCTTTTATTTTTTTTAAAT 3330
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3331 TTCAAGTCCTTAGAGGAGGAAGAATTGAAAAAATATGAAATATCAAATATACATTTAGCTAAATTTTTAAAGTT 3404
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3405 TAGTAGGCTATATGCATAAATCAAATGAATAGCAATATTTGGAACTGTAACTATTTTTGGAATCTTGTATGAAT 3478
Query 283 ----------------------- 282
Sbjct 3479 AAATTACAAGTTTAAAACATCAA 3501
