Nucleotide Global Alignment
Description
- Query:
- TRCN0000470038
- Subject:
- NR_144326.1
- Aligned Length:
- 4784
- Identities:
- 1812
- Gaps:
- 2972
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGTGACGCCACTGTCGCTGCGACGATAAGGCCTGGCGTTATTGCTTAGAGGCGGCTACCTGGAGCCGGAAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCTGCAGCAGGGCGAGGCTCCAGGTGGGGTCGGTTCCGCATCCAGCCTAGCGTGTCCACGATGCGGCTGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCGGGACTTTCGCTACCTGTTGCGTAGCGATCGAGGTGCTAGGGATCGCGGTCTTCCTTCGGGGATTCTTCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCTCCCGTTCGTTCCTCTGCCAGAGCGGAACACGGAGCGGAGCCCCCAGCGCCCGAACCCTCGGCTGGTACGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCCCTCCCCGGCGTCTCCGCTCCCCTGACCCCACATCCCCTAGAAGACCTTTTTTCTGAGCCTCGCTGCTCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTTCTTCTCGGCGCTCCCCGGTGGTCTCTTCCATTATGGTCCCCACCTCAGAAATTTTTTTTAACCGCTCCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTCTCTTTTCTGTATTCTTACAACTTTGTGGCAACCACCTCTACTGGCCCCACTTCGACCTTCCTTCCTGATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCACAAAGAGCCAGTTCTAACTGGACCACGCTGCCACCACCTCTCTTCAGTAAAGTTGTTATTGTTCTGATAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGCCTTGAGAGATGATTTTGTGTTTGGGTCAAAGGGTGTGAAATTTATGCCCTACACAACTTACCTTGTGGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGGAGCATCTCACAGTTTTGTGGCTGAAGCAAAGCCACCTACAGTTACTATGCCTCGAATCAAGGCATTGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACGGGGAGCCTTCCTGGCTTTGTCGACGTCATCAGGAACCTCAATTCTCCTGCACTGCTGGAAGACAGTGTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAAGACAAGCAAAAGCAGCTGGAAAAAGAATAGTCTTTTATGGAGATGAAACCTGGGTTAAATTATTCCCAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATTTTGTGGAATATGATGGAACAACCTCATTTTTCGTGTCAGATTACACAGAGGTGGATAATAATGTCACGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCATTTGGATAAAGTATTAAAAAGAGGAGATTGGGACATATTAATCCTCCACTACCTGGGGCTGGACCACATTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCACATTTCAGGGCCCAACAGCCCCCTGATTGGGCAGAAGCTGAGCGAGATGGACAGCGTGCTGATGAAGATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACACCTCACTGCAGTCGAAGGAGAGAGAGACGCCTTTACCCAATTTGCTGGTTCTTTGTGGTGACCATGGCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTCTGAAACAGGAAGTCACGGGGCCTCCTCCACCGAGGAGGTGAATACACCTCTGATTTTAATCAGTTCTGCGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGAAAGGAAACCCGGTGATATCCGACATCCAAAGCACGTCCAACAGACGGATGTGGCTGCGACACTGGCGATA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCACTTGGCTTACCGATTCCAAAAGACAGTGTAGGGAGCCTCCTATTCCCAGTTGTGGAAGGAAGACCAATGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGAGCAGTTGAGATTTTTACATTTGAATACAGTGCAGCTTAGTAAACTGTTGCAAGAGAATGTGCCGTCATATG 1480
Query 1 -----------------------------ATGTCAGAAAGATTGCATGGGAACTGGATCAGACTGTACTTGGAG 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAAAGATCCTGGGTTTGAGCAGTTTAAAATGTCAGAAAGATTGCATGGGAACTGGATCAGACTGTACTTGGAG 1554
Query 46 GAAAAGCATTCAGAAGTCCTATTCAACCTGGGCTCCAAGGTTCTCAGGCAGTACCTGGATGCTCTGAAGACGCT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAAAAGCATTCAGAAGTCCTATTCAACCTGGGCTCCAAGGTTCTCAGGCAGTACCTGGATGCTCTGAAGACGCT 1628
Query 120 GAGCTTGTCCCTGAGTGCACAAGTGGCCCAGTACGACATCTATTCGATGATGGTGGGGACTGTCGTGGTTTTGG 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GAGCTTGTCCCTGAGTGCACAAGTGGCCCAGTACGACATCTATTCGATGATGGTGGGGACTGTCGTGGTTTTGG 1702
Query 194 AGGTTCTCACCCTGCTCCTGCTCAGCGTCCCACAGGCACTGCGCAGAAAGGCTGAGCTGGAAGTCCCACTGTCA 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGTTCTCACCCTGCTCCTGCTCAGCGTCCCACAGGCACTGCGCAGAAAGGCTGAGCTGGAAGTCCCACTGTCA 1776
Query 268 TCTCCTGGGTTTTCTCTGCTCTTTTATTTGGTGATCCTGGTTCTTTCGGCCGTTCACGTCATTGTGTGCACCTC 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCTCCTGGGTTTTCTCTGCTCTTTTATTTGGTGATCCTGGTTCTTTCGGCCGTTCACGTCATTGTGTGCACCTC 1850
Query 342 AGCTGAAAGTTCGTGCTACTTCTGTGGCCTCTCGTGGCTGGCGGCAGGTGGGGTGATGGTGCTGGCCTCGGCGC 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGCTGAAAGTTCGTGCTACTTCTGTGGCCTCTCGTGGCTGGCGGCAGGTGGGGTGATGGTGCTGGCCTCGGCGC 1924
Query 416 TGCTGTGTGTGATTGTGTCTGTTCTGACCAACGTGCTCGTGGGTGGAAACACCCCAAGGAAGAACCCCATGCAT 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGCTGTGTGTGATTGTGTCTGTTCTGACCAACGTGCTCGTGGGTGGAAACACCCCAAGGAAGAACCCCATGCAT 1998
Query 490 CCCAGCTCAAGGTGGTCAGAGCTAGACCTTCTTATTCTGTTGGGGACGGCGGGCCACGTCTTGAGCCTGGGCGC 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCCAGCTCAAGGTGGTCAGAGCTAGACCTTCTTATTCTGTTGGGGACGGCGGGCCACGTCTTGAGCCTGGGCGC 2072
Query 564 CAGCAGCTTCGTGGAGGAGGAGCACCAGACCTGGTACTTCCTTGTGAACACCCTGTGTCTAGCTCTGAGCCAAG 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAGCAGCTTCGTGGAGGAGGAGCACCAGACCTGGTACTTCCTTGTGAACACCCTGTGTCTAGCTCTGAGCCAAG 2146
Query 638 AAACCTACAGAAACTACTTTCTGGGAGATGACGGTGAGCCTCCGTGTGGCCTCTGTGTGGAACAAGGGCATGAC 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AAACCTACAGAAACTACTTTCTGGGAGATGACGGTGAGCCTCCGTGTGGCCTCTGTGTGGAACAAGGGCATGAC 2220
Query 712 GGGGCCACAGCAGCGTGGCAGGACGGGCCTGGCTGTGATGTCCTGGAGCGAGACAAAGGCCACGGAAGCCCCTC 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GGGGCCACAGCAGCGTGGCAGGACGGGCCTGGCTGTGATGTCCTGGAGCGAGACAAAGGCCACGGAAGCCCCTC 2294
Query 786 TACCTCCGAAGTGCTCAGAGGCCGCGAGAAGTGGATGGTGCTGGCCAGTCCGTGGCTAATACTGGCCTGCTGCC 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TACCTCCGAAGTGCTCAGAGGCCGCGAGAAGTGGATGGTGCTGGCCAGTCCGTGGCTAATACTGGCCTGCTGCC 2368
Query 860 GGCTGCTGCGCTCCCTAAACCAGACAGGTGTGCAGTGGGCTCACCGGCCTGACCTCGGCCACTGGCTCACCAGC 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GGCTGCTGCGCTCCCTAAACCAGACAGGTGTGCAGTGGGCTCACCGGCCTGACCTCGGCCACTGGCTCACCAGC 2442
Query 934 TCTGACCACAAAGCCGAGCTCTCTGTCCTGGCTGCCCTCTCCCTCCTCGTAGTTTTTGTGCTGGTGCAGAGGGG 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TCTGACCACAAAGCCGAGCTCTCTGTCCTGGCTGCCCTCTCCCTCCTCGTAGTTTTTGTGCTGGTGCAGAGGGG 2516
Query 1008 GTGCTCCCCTGTGTCCAAGGCTGCCCTGGCGCTGGGGCTGCTGGGCGTCTACTGCTACCGGGCGGCCATCGGGA 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GTGCTCCCCTGTGTCCAAGGCTGCCCTGGCGCTGGGGCTGCTGGGCGTCTACTGCTACCGGGCGGCCATCGGGA 2590
Query 1082 GTGTCCGGTTCCCGTGGCGGCCGGACAGCAAGGACATTTCCAAGGGTATTATTGAAGCTCGTTTTGTTTATGTC 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GTGTCCGGTTCCCGTGGCGGCCGGACAGCAAGGACATTTCCAAGGGTATTATTGAAGCTCGTTTTGTTTATGTC 2664
Query 1156 TTTGTCCTTGGCATTCTGTTCACGGGCACCAAAGACTTACTTAAATCTCAAGTCATTGCTGCAGACTTCAAACT 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TTTGTCCTTGGCATTCTGTTCACGGGCACCAAAGACTTACTTAAATCTCAAGTCATTGCTGCAGACTTCAAACT 2738
Query 1230 CAAGACTGTAGGTTTATGGGAGATATATAGTGGATTAGTTCTTCTGGCAGCCTTGCTCTTTAGACCACATAATC 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CAAGACTGTAGGTTTATGGGAGATATATAGTGGATTAGTTCTTCTGGCAGCCTTGCTCTTTAGACCACATAATC 2812
Query 1304 TTCCGGTCTTAGCATTTAGCCTCTTGATTCAGACTCTAATGACTAAATTCATCTGGAAGCCCCTGAGACACGAT 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TTCCGGTCTTAGCATTTAGCCTCTTGATTCAGACTCTAATGACTAAATTCATCTGGAAGCCCCTGAGACACGAT 2886
Query 1378 GCAGCTGAGATTACTGTGATGCATTATTGGTTTGGTCAAGCATTCTTCTATTTTCAGGGCAACTCCAACAACAT 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GCAGCTGAGATTACTGTGATGCATTATTGGTTTGGTCAAGCATTCTTCTATTTTCAGGGCAACTCCAACAACAT 2960
Query 1452 TGCCACCGTGGACATCTCCGCAGGCTTCGTGGGCTTAGACACCTACGTGGAAATCCCAGCCGTGCTCCTGACAG 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TGCCACCGTGGACATCTCCGCAGGCTTCGTGGGCTTAGACACCTACGTGGAAATCCCAGCCGTGCTCCTGACAG 3034
Query 1526 CGTTTGGGACGTACGCAGGGCCTGTGCTGTGGGCCAGCCACTTAGTGCACTTCCTGAGCTCAGAAACACG---- 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CGTTTGGGACGTACGCAGGGCCTGTGCTGTGGGCCAGCCACTTAGTGCACTTCCTGAGCTCAGAAACACGCAGG 3108
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3109 TGCCTGTGGACGCTTGACACGCCCACTTTGGGGCAGTCTGTGGACAGACCCCCGTAATTTACAGTCACCGCTGA 3182
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3183 GCTTGTCATCACAGCAGAAAGCTGAGGCTCTGCGGGCGGAAGCCACCAACAGACCAGCTTGGGAGACACCCACT 3256
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3257 GTGGCGGCGCTGTGTGGAGACGTCCTTCCAGACTTCGATTCTGCATAAAAACAAACATCTGCCACGAGACCCCT 3330
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3331 GCTCGGCGTCCGCCTGTCTCAGCAGCTGCCCTGGGACGTCTTTCTCTGACTTGGTTTTGAGGCCAGCCGCGTGC 3404
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3405 TCACACTGGCCTTACAGAAACAGGAGACGCCGTCCTCGGCCGTCTGGGGTGGGCTGTCAGCACGTCGTGTGGTC 3478
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3479 AGGTGTCAGGACAAGCGGGCGTGAGCGCGTGGAGGTGCATCTGCCTCTGCCCTGGAGAACGGATGTGCTACAGC 3552
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3553 TGTGCGCGGCGTGATCAAGCACCTGTTGGGTGGACGGCACACCTCCCAGTGGCCAGCTGGAGACGGAGGGCTGG 3626
Query 1596 -------------------------------------------------------------------------- 1595
Sbjct 3627 AAGTACTTGCCCGGCTCCTCTCTCTGTAGGTTTGGTCTTCGGCCTTGCAGCTGCCCTGGTGCTTGCAGATTGCG 3700
Query 1596 -------------------------------------CAGTGGTTCAGCACTGAGTCATGCTTGCTTCTGCTAC 1632
|||||||||||||||||||||||||||||||||||||
Sbjct 3701 GTTTGATGGACCAGGCACTTTTCATCTCTTACACAGCCAGTGGTTCAGCACTGAGTCATGCTTGCTTCTGCTAC 3774
Query 1633 GCACTGATTTGTTCTATTCCAGTTTTCACGTACATCGTTTTGGTGACATCTCTGCGTTATCATTTATTTATATG 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GCACTGATTTGTTCTATTCCAGTTTTCACGTACATCGTTTTGGTGACATCTCTGCGTTATCATTTATTTATATG 3848
Query 1707 GAGTGTATTTTCTCCAAAACTTCTCTACGAGGGAATGCACCTGCTCATTACAGCTGCTGTCTGTGTATTCTTCA 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 GAGTGTATTTTCTCCAAAACTTCTCTACGAGGGAATGCACCTGCTCATTACAGCTGCTGTCTGTGTATTCTTCA 3922
Query 1781 CGGCAATGGATCAAACCAGACTCACACAGTCT------------------------------------------ 1812
||||||||||||||||||||||||||||||||
Sbjct 3923 CGGCAATGGATCAAACCAGACTCACACAGTCTTAGACTAAGCTGAACACTGGAAAAATAATACATGCTTAAAGT 3996
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3997 CTGCTGTTATTCTAAAATGAAAGATATGAATTCAACAAAGTTGATGGATAACTTTCTTTGACTGCTCTACCTGA 4070
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4071 ATTTAGACTAAGCAGTAAATAGTTTAATAAAAGATCACTTTAATATACAGTTTGTATCATATTTTCCCCCATTG 4144
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4145 ACAATCACTCTAGAAGCTTCTGAACTTTTAATTTCCTCTGAATAAGCTATGGTGTGACCCAAATATGTGTGTTT 4218
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4219 AAATCAATGAATGAAAAGGTTCTGGACTTTGTTAGAGTCCAGGAGCTCTGTGGGAGGAGGCACCCAGATTACCT 4292
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4293 TAGGGAGCACAGAGCTCTTAGAATCCTACAAACCACTGAGGGCCCCAAGGCGCTTTGGTTTATGAGGGTTACAT 4366
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4367 GTATCAGTGTTTATGGCATTTGAGATGAAAACTAAGATAAAAAAGTATTCATTTATAAGGAATCTATTGCATAT 4440
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4441 TAATGAAACACTTGAAGGAAAAGTAACTATATTTTCCAAAACAAAAAAATTCAGTGAGACCCAGCACTTTGGGA 4514
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4515 GGCCAGAGTGGGGGTATCACTTGAGCCCAGGTGTTTGAGATCAGCCTGGGAAACATAGTGAGACCCTCATCTCT 4588
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4589 CCAAAAACTTCAAAAAATTAGCTGGGCGTGATGGCACACACCTGTGGTCCCAGCTACTCAGGTGGCTGAGGAAA 4662
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4663 GAGTATTGTTTCAGCCGAGTTCAAGGCTGCAGTGAGCCATGATTGTACCACTGTACTCCAGCCAGGACAACAGA 4736
Query 1813 ------------------------------------------------ 1812
Sbjct 4737 GTGAGACTCTTGTCTTTAAAATGAAAAAATAAATGTTTAATGAGAAAA 4784