Nucleotide Global Alignment
Description
- Query:
- TRCN0000470042
- Subject:
- XM_006507337.3
- Aligned Length:
- 1795
- Identities:
- 1145
- Gaps:
- 383
Alignment
Query 1 ATGTTTGGGATTCAGGAAAGCATCCAACG-GAGTGGAAGCAGCATGAAGGAAGAGCCGCTGGGCAGCGGCATGA 73
|||||||||||||||||.|..||.|..|| |.|.|||.| |.|||||||||.||||||||||||||||||||||
Sbjct 1 ATGTTTGGGATTCAGGAGAATATTCCGCGCGGGGGGACG-ACCATGAAGGAGGAGCCGCTGGGCAGCGGCATGA 73
Query 74 ACGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCTG 147
||.|||||||..||||||||||....||.||.|||.||||||||||||||||.||.||||||||.|||||.|||
Sbjct 74 ACCCGGTGCGCTCGTGGATGCACACGGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCTG 147
Query 148 GCCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTGCGGAAATCCAACTTCTTCCACTTCGTCCTGGCCCT 221
||.|||||.|||||.|||||||||||.||||||||.||.|||||||||||.||||||||||||||.|||||.||
Sbjct 148 GCGCGGGCGCACTTCGAGAAGCAGCCTCCTTCCAACCTCCGGAAATCCAATTTCTTCCACTTCGTGCTGGCGCT 221
Query 222 CTACGACAGACAGGGCCAGCCCGTGGAGATCGAGAGGACAGCGTTTGTGGGGTTCGTGGAGAAGGAAAAAGAAG 295
|||||||||.|||||.|||||.|||||||||||.|||||.||.|||||||..||.||||||||.||.|||| ||
Sbjct 222 CTACGACAGGCAGGGGCAGCCGGTGGAGATCGAAAGGACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAG-AG 294
Query 296 CC-AACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGGA 368
|| ||||.|||.||.|||||.|||||.|||||||||..|||.|||||.||.|||||||||||..|.||.||.||
Sbjct 295 CCGAACAACGAGAAAACCAACAACGGCATTCACTACAAGCTGCAGCTACTGTACAGCAATGGCGTCAGAACAGA 368
Query 369 GCAGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACC 442
|||.|||.|.||.||.||||||||.||.||.|||||.|||||.|||||.||||||||||||||.||||||||.|
Sbjct 369 GCAAGATCTGTATGTCCGCCTCATAGATTCAATGACCAAACAGGCCATCGTGTATGAAGGCCAGGACAAGAATC 442
Query 443 CAGAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAAC 516
|.||.||||||||.||..||||.||.||.|||||||||||||||||.||.|||||||||||.||.||||||||.
Sbjct 443 CGGAGATGTGCCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAGAGTTGTGGCAAT 516
Query 517 CGAAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTAACCAAAA 590
.||||.|||||.||||||||.||.||.||.||||||||.|||||..|.||.||.||||||||.||.||.||.||
Sbjct 517 AGAAACGAGACACCCTCAGACCCTGTAATCATTGACAGATTCTTTCTAAAGTTCTTCCTCAAGTGCAATCAGAA 590
Query 591 TTGCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGG 664
.|||||.|||||||||||.|||||.||.|||||||||||.|||||||||||.||.||.||.||||||||.||||
Sbjct 591 CTGCCTGAAGAATGCGGGCAACCCTCGGGACATGCGGAGGTTCCAGGTCGTTGTATCGACAACAGTCAACGTGG 664
Query 665 ATGGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCGGAGG 738
|.|||||.||.|||||.||.|||||.|||||||||||.||.||.||||||||.||.|||.||.||||.||..|.
Sbjct 665 ACGGCCACGTGCTGGCCGTGTCTGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCCGC 738
Query 739 CTTGACCCCTCGGAAGGTACG---CCCTCTTATCTGGAACATGCTACTCCCTGTATCAAAGCCATCAGCCCGAG 809
||.|||||.||.||||||||| ||.||||||||||||.||||.|||||.||||||||.||.||||||||.||
Sbjct 739 CTAGACCCGTCAGAAGGTACGGCCCCTTCTTATCTGGAAAATGCCACTCCGTGTATCAAGGCTATCAGCCCCAG 812
Query 810 TGAAGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATAT 883
||||||.|||||.|||||.|||||.|||||||||||.||.||||||||.||||||||.||..||||.||..|.|
Sbjct 813 TGAAGGCTGGACCACGGGGGGTGCCACTGTGATCATAATCGGGGACAACTTCTTTGACGGTCTACAAGTTGTGT 886
Query 884 TCGGTACCATGCTGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCGGCACATC 957
||||.||.|||.||||.|||||||||.||||.||.||.||.||||||||.||||||||.||.|||||.||||||
Sbjct 887 TCGGAACTATGTTGGTGTGGAGTGAGCTGATAACCCCCCACGCCATCCGAGTGCAGACGCCGCCTCGACACATC 960
Query 958 CCTGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGATTCATTTA 1031
|||||.|||||.|||||.||.||.||||||||.||||||||||||||||||||..|.||.||..|.||..|.||
Sbjct 961 CCTGGAGTTGTTGAAGTGACCCTCTCCTACAAGTCTAAGCAGTTCTGCAAAGGCGCTCCTGGACGCTTTGTCTA 1034
Query 1032 TACAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTG 1105
.||.||.||.||.||.||.|||||.|||||.||.|||||||||||.|||||.||.||.||..|.||.||.||||
Sbjct 1035 CACTGCCCTTAATGAGCCAACCATAGATTACGGCTTCCAGAGGTTGCAGAAAGTGATACCCAGACATCCAGGTG 1108
Query 1106 ACCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCA 1179
||||.||..|.||.||.||||||||..||||.||.|||||.||.||.||.||.|||||..|||||||||||||.
Sbjct 1109 ACCCCGAAAGGTTACCCAAGGAAGTGTTACTGAAGAGGGCAGCAGACCTTGTGGAAGCCTTGTATGGGATGCCT 1182
Query 1180 CACAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCCGCAACCA 1253
|||||.||||||||.|||||.|||||||||||||||||||||||.|||||..|||||||.|||||||||||.||
Sbjct 1183 CACAATAACCAGGAGATCATCCTGAAGAGAGCGGCCGACATTGCTGAGGCGTTGTACAGCGTTCCCCGCAATCA 1256
Query 1254 CAACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAAC 1327
||||||..||||..||||.|..||||||.|.|..|||.|.||.||||||||.|||||.||.|||||..|.||.|
Sbjct 1257 CAACCAGATCCCCACCCTGGGCAACACCCCAGCACACACTGGCATGATGGGTGTGAACTCCTTCAGCAGCCAGC 1330
Query 1328 TGGCCGTGAATGTCTCCGAGGCATCACAAGCC----ACCAATCAGGG------TTTCACCCGCAACTCAAGCAG 1391
|.|||||.|||||.||.|||.|.||||||||| |||| |||| || .|||||..||...|||
Sbjct 1331 TAGCCGTTAATGTGTCAGAGACCTCACAAGCCAATGACCA---AGGGAAGACCTT---GCCGCACATCTTCCAG 1398
Query 1392 C-GTATCACCACACGGGTACGTGCCGAGCACCACTC------CCCAGCAGACCAACTATAACTCCGTCACCACG 1458
| || |..|.||.||| |.||||| ||||| |||
Sbjct 1399 CTGT-------------TCTGGGCAGAG-AACACTCAAAGAACCCAG---------------TCC--------- 1434
Query 1459 AGCATGAACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGC 1532
Sbjct 1435 -------------------------------------------------------------------------- 1434
Query 1533 CAACTCCCCCTATGCCATAGTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCA 1606
Sbjct 1435 -------------------------------------------------------------------------- 1434
Query 1607 GCTCCTCGGGCATCTTCTCCTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCA 1680
Sbjct 1435 -------------------------------------------------------------------------- 1434
Query 1681 GTCGTCAGACCCCAGACCTCCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAGCGATATCTGG 1754
Sbjct 1435 -------------------------------------------------------------------------- 1434
Query 1755 CATGATTGTTCCTCCTATG 1773
Sbjct 1435 ------------------- 1434
