Nucleotide Global Alignment

Description

Query:
TRCN0000470042
Subject:
XM_006532157.3
Aligned Length:
1785
Identities:
1561
Gaps:
117

Alignment

Query    1  ATGTTTGGGATTCAGGAAAGCATCCAACGGAGTGGAAGCAGCATGAAGGAAGAGCCGCTGGGCAGCGGCATGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGCGGTGCGGACGTGGATGCAGGGCGCC---GGGGTGCT---GGACGCCAACACGGCGGCGCAG---AGCGGGG  139
                            |||.|.||.|||   |||.||.|   |||               ||||   |||||||
Sbjct    1  ----------------ATGGAAGGAGCCCAGGGGATGTTTTGGGA---------------GCAGAGAAGCGGGG  43

Query  140  TGGGTCTGGCCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTGCGGAAATCCAACTTCTTCCACTTCGTC  213
            ||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||
Sbjct   44  TGGGTCTGGCCCGGGCTCACTTTGAGAAGCAGCCGCCTTCTAACCTGCGGAAATCCAACTTCTTCCACTTCGTC  117

Query  214  CTGGCCCTCTACGACAGACAGGGCCAGCCCGTGGAGATCGAGAGGACAGCGTTTGTGGGGTTCGTGGAGAAGGA  287
            ||||||||||||||||||||||||||||||||||||||.||||||||.||.|||||||||||||||||||||||
Sbjct  118  CTGGCCCTCTACGACAGACAGGGCCAGCCCGTGGAGATTGAGAGGACGGCCTTTGTGGGGTTCGTGGAGAAGGA  191

Query  288  AAAAGAAGCCAACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACAGCAATGGGATAA  361
            ||||||||||||||||||||||||||||||.||.||.|||||||||||.|||||.||||||||||||||||||.
Sbjct  192  AAAAGAAGCCAACAGCGAAAAGACCAATAATGGGATCCACTACCGGCTCCAGCTCCTCTACAGCAATGGGATAC  265

Query  362  GGACGGAGCAGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGAC  435
            ||||.||.|||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  266  GGACAGAACAGGATTTCTATGTGCGCCTCATCGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGAC  339

Query  436  AAGAACCCAGAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTG  509
            ||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct  340  AAGAACCCTGAAATGTGCCGAGTATTGCTCACACACGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTG  413

Query  510  TGGCAACCGAAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTA  583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.||||||||.|||||.|
Sbjct  414  TGGCAACCGAAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCCTGAAGTTTTTCCTTAAATGCA  487

Query  584  ACCAAAATTGCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTC  657
            ||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  488  ACCAAAATTGCCTAAAGAATGCAGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACCACAGTC  561

Query  658  AATGTGGATGGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGC  731
            ||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||||||||
Sbjct  562  AACGTGGATGGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCACAATAACTCCAAGCACGGGCGGAGGGC  635

Query  732  TCGGAGGCTTGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACAT---GCTACTCCCTGTATCAAAGCCATCA  802
            ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct  636  TCGGAGGCTTGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACATGCAGCTACTCCCTGTATCAAAGCCATCA  709

Query  803  GCCCGAGTGAAGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAG  876
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  710  GCCCGAGTGAAGGATGGACGACGGGAGGCGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAG  783

Query  877  GTCATATTCGGTACCATGCTGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCG  950
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||.||||||||
Sbjct  784  GTCATATTCGGTACCATGCTGGTCTGGAGTGAGTTGATAACTCCTCATGCCATCCGAGTTCAGACACCTCCTCG  857

Query  951  GCACATCCCTGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGAT  1024
            |||||||||||||||.|||||||||||||||||.|||||.||.|||||||||||||||||.|||||||||||||
Sbjct  858  GCACATCCCTGGTGTGGTGGAAGTCACACTGTCGTACAAGTCCAAGCAGTTCTGCAAAGGGACACCAGGCAGAT  931

Query 1025  TCATTTATACAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCAC  1098
            ||||.||.|||||.|||||.||||||||||||||.||.||.||||||||||||||||||||||||||||||||.
Sbjct  932  TCATCTACACAGCACTCAATGAACCCACCATCGACTACGGCTTCCAGAGGTTACAGAAGGTCATTCCTCGGCAT  1005

Query 1099  CCTGGTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGG  1172
            |||||||||||.|||||.||||||||||||||.||.||.|||||.|||||.||||||||.|||||.||||||||
Sbjct 1006  CCTGGTGACCCAGAGCGCTTGCCAAAGGAAGTGATCCTTAAAAGAGCTGCAGATCTGGTTGAAGCCCTGTATGG  1079

Query 1173  GATGCCACACAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCC  1246
            ||||||.||||||||||||||.||.||.|||||||||||.|||||||||||.|||||.|||||||||||.||.|
Sbjct 1080  GATGCCCCACAACAACCAGGAGATTATCCTGAAGAGAGCTGCCGACATTGCAGAGGCTCTGTACAGTGTCCCTC  1153

Query 1247  GCAACCACAACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGT  1320
            |.|||||||||||.|||||.||||||||||||||.||||||||.||||||||||||||.|||||.||.||||||
Sbjct 1154  GGAACCACAACCAGCTCCCAGCCCTTGCTAACACTTCGGTCCATGCAGGGATGATGGGTGTGAACTCCTTCAGT  1227

Query 1321  GGACAACTGGCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCAGCGT  1394
            |||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1228  GGACAACTGGCTGTGAATGTCTCGGAGGCATCACAAGCCACCAATCAAGGTTTCACCCGCAACTCAAGCAGCGT  1301

Query 1395  ATCACCACACGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCATGAACG  1468
            .||||||||.||.||.||||||||||||||.||.|||||.||||||||||||||.||||||||.||||||||.|
Sbjct 1302  GTCACCACATGGCTATGTGCCGAGCACCACCCCACAGCAAACCAACTATAACTCAGTCACCACAAGCATGAATG  1375

Query 1469  GATACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCC  1542
            |.||||||||.|||||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||.|||
Sbjct 1376  GCTACGGCTCAGCCGCCATGTCCAATTTGGGCGGCTCCCCAACCTTCCTCAATGGCTCAGCTGCCAACTCACCC  1449

Query 1543  TATGCCATAGTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGG  1616
            ||||||||.||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||||||||.||
Sbjct 1450  TATGCCATTGTGCCATCCAGCCCCACCATGGCCTCATCTACAAGCCTCCCCTCCAACTGCAGTAGCTCCTCTGG  1523

Query 1617  CATCTTCTCCTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGTCAGAC  1690
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||
Sbjct 1524  CATCTTCTCCTTCTCACCAGCCAACATGGTCTCAGCAGTGAAACAGAAGAGTGCTTTCGCACCAGTTGTCAGAC  1597

Query 1691  CCCAGACCTCCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAGCGATATCTGGCATGATTGTT  1764
            |||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1598  CCCAGACGTCCCCTCCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAGCGATATCTGGCATGATTGTC  1671

Query 1765  CCTCCTATG  1773
            |||||.|||
Sbjct 1672  CCTCCCATG  1680

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