Nucleotide Global Alignment
Description
- Query:
- TRCN0000470042
- Subject:
- XM_017009204.1
- Aligned Length:
- 1832
- Identities:
- 959
- Gaps:
- 847
Alignment
Query 1 ATGTTTGGGATTCAGGAAAGCATCCAACGGAGTGGAAGCAGCATGAAGGAAGAGCCGCTGGGCAGCGGCATGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCTGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTGCGGAAATCCAACTTCTTCCACTTCGTCCTGGCCCTC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TACGACAGACAGGGCCAGCCCGTGGAGATCGAGAGGACAGCGTTTGTGGGGTTCGTGGAGAAGGAAAAAGAAGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGGAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACCCA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAACCG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTAACCAAAATT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGGAT 666
|||...|||.||.| ||.|||| ||||| ||||.|
Sbjct 1 ---------ATGGATGAAGCCAA------------AGTTTCC---TCGTG-----------------TGTGAA- 32
Query 667 GGCCATGTCCTGGCAGTCTCTGATA-ACATGT--------TTGTCCATAATAATTCC--AAGCATGGGCGGAGG 729
||.|| .|||||| | |||.|| |||||..|| ||| |.||||
Sbjct 33 -GCAAT-------TAGTCTC----ACACAGGTTCTCCTCGTTGTCTTTA-----TCCAGATGCAT--------- 80
Query 730 GCTCGGAGGCTTGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACATGCTAC--TCCCTGTATCAAAGCCATC 801
|||| |||| || ||||| |||| ||.|
Sbjct 81 --------GCTT---------------------TCTT--------CA-GCTACATTCCC--------AGAC--- 105
Query 802 AGCCCGAGTGAAGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACA 875
||||| || ||| |
Sbjct 106 ---------------------ACGGG----GC--------------------------------ATG------A 116
Query 876 GGTCATATTCGGTACCATGCTGGTCTGGAGTGAG----TTGATCACTCCTCATGCCATCCGTGTGCAGACCCCT 945
.||||.| .|..||| ||||| |.||| ||||||||||||||||||||||||||||||||||||
Sbjct 117 AGTCAAA--AGAAACC-------TCTGG-GGGAGACCTTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCT 180
Query 946 CCTCGGCACATCCCTGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGG 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CCTCGGCACATCCCTGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGG 254
Query 1020 CAGATTCATTTATACAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTC 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 CAGATTCATTTATACAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTC 328
Query 1094 GGCACCCTGGTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTG 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 GGCACCCTGGTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTG 402
Query 1168 TATGGGATGCCACACAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGT 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 TATGGGATGCCACACAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGT 476
Query 1242 TCCCCGCAACCACAACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGT 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 TCCCCGCAACCACAACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGT 550
Query 1316 TCAGTGGACAACTGGCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGC 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 TCAGTGGACAACTGGCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGC 624
Query 1390 AGCGTATCACCACACGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCAT 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 AGCGTATCACCACACGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCAT 698
Query 1464 GAACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACT 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 GAACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACT 772
Query 1538 CCCCCTATGCCATAGTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCC 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 CCCCCTATGCCATAGTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCC 846
Query 1612 TCGGGCATCTTCTCCTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGT 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 TCGGGCATCTTCTCCTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGT 920
Query 1686 CAGACCCCAGACCTCCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAGCGATATCTGGCATGA 1759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||.|.|.|
Sbjct 921 CAGACCCCAGACCTCCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAG----ATCAGTCTT-- 988
Query 1760 TTGT-------------TCCTCCTATG----------------------------- 1773
|||| |.||||..||
Sbjct 989 TTGTGGACTCTAGCAAGTTCTCCAGTGCAGGGTCTCTCCCGGGACTGGCCTTCTCC 1044
