Nucleotide Global Alignment

Description

Query:
TRCN0000470878
Subject:
XR_002956167.1
Aligned Length:
5242
Identities:
417
Gaps:
4807

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGTCTGCGCAGGGACTGGCGGGACTGCGCGGCGGCAACAGCAGACATGTCGGGGGTCCGGGGCCTGTCGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGCTGAGCGCTCGGCGCCTGGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTGCGAGCTGCATTTGGCCTTTCTGAGGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCACAGGGAGGAATCAA  370

Query    1  ----------------ATGGAGGAGGACAACTGGAGGTGGCATTTCTATGACACCGTGAAGGGCTCCGACTGGC  58
                            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  371  TGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGC  444

Query   59  TGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGAGGTAGAAAATTATGGC  132
            ||||||||||||||||||||||||||.|||||||||||||||||.|.|||.||||||||.||||||||||||||
Sbjct  445  TGGGGGACCAGGATGCCATCCACTACATGACGGAGCAGGCCCCCGCCGCCGTGGTCGAGCTAGAAAATTATGGC  518

Query  133  ATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACACAGCCTCAAGTTTGGAAA  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct  519  ATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAA  592

Query  207  GGGCAGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCTTATATGGGA  280
            ||||.|||||||||||||||||||||||||||||||||||||.||||||||..|||||||||||||||||||.|
Sbjct  593  GGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACTGGCCACTCGCTATTGCACACCTTATATGGAA  666

Query  281  GGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGC  354
            ||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGC  740

Query  355  CGTGGTGTCTTCGCACTGTGCATACAGGACGGGTCCATCCATCGCATAAGAGCAAAGAATACTATTGTTGCCAC  428
            |||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||.|||.||||||||||
Sbjct  741  CGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCAC  814

Query  429  AGGGTACTTGGGAGGC----------------------------------------------------------  444
            |         ||||||                                                          
Sbjct  815  A---------GGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACTGGCGACGGCACGG  879

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct  880  CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCTACAGGCATATATGGT  953

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct  954  GCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTAT  1027

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1028  GGAGCGATACGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCCATGACTCTGGAGATCC  1101

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1102  GAGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTG  1175

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1176  GCCACGCGCCTGCCTGGCATTTCAGAGACAGCCATGATCTTCGCTGGCGTGGACGTCACGAAGGAGCCGATCCC  1249

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1250  TGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTCCTGAGGCACGTGA  1323

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1324  ATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAAC  1397

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1398  CGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATG  1471

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1472  CAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGA  1545

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1546  GATTTGCTGATGGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGTCAATGCAAAATCATGCTGCC  1619

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1620  GTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTCTATGGAGACCTAAAGCACCT  1693

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1694  GAAGACGTTCGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGT  1767

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1768  GTGCGCTGCAGACCATCTACGGAGCAGAGGCACGGAAGGAGTCACGGGGCGCGCATGCCAGGGAAGACTACAAG  1841

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1842  GTGGGCCTTCTCACCACGCCCACCTGCACCTGCCTTTTCCTGCCACCTGGTGGGACTCAGCCCCACCCCTGCAT  1915

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1916  TTTCTCTGCATTTTCTTTCGTTGCCCCAAAAGTAAATCCAAAAAATGCCTTTTTCCCCCCTGGTAACTTTGATC  1989

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 1990  CCTGGGTTCTCGCCATCTTCTGGATCACTGTGACCTTTTCCTTGCTTTGGGTCGGCATCCACTGATGCCAGCAG  2063

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2064  TGGCATCTCCAAGCCAATGTGCTTTGCTGTTAGAAGGCCAAGGTTAGAAGTGCAGCTAGAGTGGCAAGACCAGG  2137

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2138  AAATAAATGCCAGTTTATTAAATAACGAGTAAGCCATCATTTCAAGCCTGCCCTGTGGAGGAAATGCCAGTTTA  2211

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2212  TTAAATAACGAGTAAGCCACCGTTTCAAACCTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGC  2285

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2286  CACCGTTTCAAACCTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGC  2359

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2360  CCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAGACCTGCCCTGTGGTGGAAATGCC  2433

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2434  AGTTTATTAAATAACGAGTAAGCCACTGTTTCAAACCTGCCCTGTGGAGGAAATGCCAGTTTATTAACGAGTAA  2507

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2508  GTCACTGTTTCAAACCTGTCCTGTGGAGGAAATGCCAGTTTATTAACGAATAAGCCACCGTTTCAAACCTGCCC  2581

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2582  TGTGAAGGAAATGCCAGTTTATTAAATAAGGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGGAGGAAATGCCCG  2655

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2656  TTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGGAGGAAATGCCCGTTTATTAAATAAGGAGT  2729

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2730  AAGCCACCATTTCAAGCCTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGC  2803

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2804  CTGCCCTGTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCATTTCAAACCTGCCCTGTGGAGGAAA  2877

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2878  TGCCAGTTTATTAACGAGTAAGTCACCGTTTCAAACCTGCCCTGTGGAGGAAATGCCAGTTTAGTAACGAGTAA  2951

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 2952  GTCACCGTTTTAAGCCTGTCCTGTGGAGGAAATGCCAGTTTATTAACGAGTAAGCCACCGTTTCAAACCTGCCC  3025

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3026  TGTGGAGGAAGTGCCAGTTTATTAAATAATGAGTAAGTCACCGTTTCAAGCCTGCCCTGTGGAGGAAATGCCAG  3099

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3100  TTTATTAAATAACGAGTAAGTCACCGTTTCATACCTGCCCTGTGGAGGAAATGCCAGTTTATTAACGAGTAAGC  3173

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3174  CACCGTTTCAGACCTGCCCTGTGGAGGAAAATGCCAGTTTATTAACAAGTAAGTCACTGTTTCAGACCTGCCCT  3247

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3248  GTGGATGAAATGCCAGTTTATTAATGAGTAAGTCACCATTTCAGACCTGCGCTGTGGAGGAAATGCCAGTTTAT  3321

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3322  TAAATAAGGAGTAAGCCACCATTTCAGACCTGTCCTGTGGTTTGGAAAAGGTATTATAGAGCCTGCCCTGTGGT  3395

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3396  CACTTGTTCTTCAGATGAACTGATTTTTGTGCAGAGCGCACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCCCA  3469

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3470  TATGATAGCAAAAAACGACGGAAAGGGAAGCTTGGGATGCAAATGCAAGTTCAGGATAAACCACATCAGCAAAA  3543

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3544  GGACAAAGGCTCCACAAGGCAGGCGCACAGGCTGGTTCAGGACCGTGTGTAGGCGGCTGGTGGCAGCCTTTCCA  3617

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3618  GTCAGCTGAACATGGTGAATGGGAAAATCATTTTTATTCACCATGAAATTTTACTGATTTACCCTCCACTAGAA  3691

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3692  TATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTCTTGTCTCCTTGTATGTATTAAGAGTTTCCTGCAAAGT  3765

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3766  ATATGAATCCGTGTTTGCCAGAATACAGAATAATAGTAAATTTATTATTTTTATTTTTATTTTTTTGAGAAGGA  3839

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3840  ATCTCACTGTCCCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAG  3913

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3914  TGATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGATTACAGACACACTGCCACCATGCCTAATTTTGTATTTTC  3987

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 3988  AGTAGAGATGGGGTTTCACCATATTGGCCGGGCTGGTCTCGAACTCCTGACCTCAAGTGAACCACCCACCTCGG  4061

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4062  CCTCCCAAAGTGCTAGGGTTACAGGCATGAGCCACTGTGCCTGGCCAGTGCATAAATTTAGTTGGTCACAGTCA  4135

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4136  GTTTTAATTAGAATAGAAGCCAGGTGCAGTGCCTCACACCTGTAATCCCAGCATTTGGGAGGCTGAGGCAGGCC  4209

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4210  AATGACTTGAGCCCCAGAGTTGTAGACCAGCCTGGGCAACATGGCGAAACGTGTCTCTACAAAAACATAAAAAA  4283

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4284  TGAGCCAGGTGTGGTGGTAGCACAGGAGGCTGAGGCAGGAGGATTGATTGAGCCTGGGAAGTCAAGGCTCCGGC  4357

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4358  AAGCTGTGATCACACCACTGCACTCCAGCCCAGGTGACATAGCCAGACCCTGTCTCAAAAAAAAAATTTTTTTT  4431

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4432  TAATAAAAACAGGCTGAAAGAAAAGATTGAGGTAGTCTCCCAGCACATGGAGCAAAAAGACAAAGTATTTGATA  4505

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4506  AACTCTTAGGTACATAAAGGATGCTTAAGGGAACATGCGGACATGGATTACTGTGGACTCACTGCTGGCTGCAC  4579

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4580  ACCCCCTGGCCAGCCATGCGGCCTCCGTGGGTTCTGAACATGTTGATGGTGCCAACCTCCTGGGCTGAAGTGGA  4653

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4654  AATGGAATGAGTTCTAGGGCATCTGTCTCTTAGATCATGTTAATGTCTGCTGTGTTTTTTCTGTATTGCTCTGT  4727

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4728  TAGAGTAATAAGAAACGTGATGGTGTTTCTGGCCTCAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATC  4801

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4802  CAGGGGCAACAGAAGAAGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTTGGCACTGG  4875

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4876  GAAGGTCACTCTGGAATATAGACCCGTGATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCGCCAG  4949

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 4950  CCATTCGCTCCTACTGATGAGACAAGATGTGGTGATGACAGAATCAGCTTTTGTAATTATGTATAATAGCTCAT  5023

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 5024  GCATGTGTCCATGTCATAACTGTCTTCATACGCTTCTGCACTCTGGGGAAGAAGGAGTACATTGAAGGGAGATT  5097

Query  445  --------------------------------------------------------------------------  444
                                                                                      
Sbjct 5098  GGCACCTAGTGGCTGGGAGCTTGCCAGGAACCCAGTGGCCAGGGAGCGTGGCACTTACCTTTGTCCCTTGCTTC  5171

Query  445  --------------------------------------------------------------  444
                                                                          
Sbjct 5172  ATTCTTGTGAGATGATAAAACTGGGCACAGCTCTTAAATAAAATATAAATGAACAAACTTTC  5233

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