Nucleotide Global Alignment

Description

Query:
TRCN0000470961
Subject:
NR_146905.1
Aligned Length:
3669
Identities:
952
Gaps:
2637

Alignment

Query    1  ATGGCGGCGCACCTTAAGAAGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCTAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  ATTCTCTTGGAACATTATTACAAGGAGAATGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCA--TCAA----CATCCTGCAGAATGAAA  364
                  ||..||.|||   .|..||||||.|         |.|||||  ||.|    |.|||||      |.||
Sbjct    1  ------GAGGGCGGGA---GCGGCAGACTCC---------GCTGCCAGCTCTACTGGCGTCCTG------GCAA  50

Query  365  AG---------------TCTCATCAAGTCCTAGCTCAACTGCTGGATACT------TTGCTTGCAATTGGCACT  417
            .|               .|||  |..|||| ||||   ||.|.||   ||      ||.|||||        ||
Sbjct   51  GGGCAGCGCCGAGGGGCGCTC--CCGGTCC-AGCT---CTCCCGG---CTCGGGGGTTCCTTGC--------CT  107

Query  418  AAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCA------AGCATCTG---ACAGA  482
            |.|| .||||||...|..|||..|    ||| .|..|..|.|||||||||||      .||| |||   .|.||
Sbjct  108  AGGC-GCCAGAGCCCCGGGCTCCC----TGC-CTCGGCCGCTGTGGCCTGCATAGAGCGGCA-CTGCGCGCGGA  174

Query  483  TACGTCTCATGGTGTAAGA-AATAA--------GTGCC--------TGCAGTTACTTGGCAATCTTGGCTCTTT  539
            ..||    ||||   .||| ||.||        |||.|        |||||     .|||        |.||..
Sbjct  175  GGCG----ATGG---GAGAGAAGAAGGAGGGCGGTGGCGGGGGTGATGCAG-----CGGC--------CGCTGA  228

Query  540  GGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGATTATAGGGGATTACTTCA  613
            ||      |||.|         ||||..|.||   |.|||||      ||.|         |||     ||.||
Sbjct  229  GG------GTGGC---------GCAGGGGCCC---CGGCCAG------CCCG---------GGG-----CTGCA  264

Query  614  GTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGC-CAT-GTTGCAGCTCCATGAAAGAGGACTGAAAT  685
            |    ||        ||| ||||    |||||..|.|||| ||| |  |||.||||||          ||..| 
Sbjct  265  G----CA--------GTG-CAGA----CAGCTCCAGAAGCTCATCG--GCATCTCCAT----------TGGCA-  308

Query  686  TACACCAAACAATTTATAATCAGGCCTGTAAATTACTC--TCTGATGACTATGAACAAGTGCGCAGTGCTGCAG  757
                                   |||||       |.|  .|||...||      |||||||||.||      |
Sbjct  309  -----------------------GCCTG-------CGCGGGCTGGGCAC------CAAGTGCGCTGT------G  340

Query  758  TCCAGCTTATCTGGGTCGTCAGTCAGC--------TCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAATG  823
            ||||.|        |.|.|||...|||        ...|.|||| .||||||||||||||||||||||||||||
Sbjct  341  TCCAAC--------GACCTCACCGAGCAGGAGATACGGACCCTG-GAGCATTGTCCCAATTCCTTCTTCTAATG  405

Query  824  AAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCGT  897
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.|
Sbjct  406  AAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCAT  479

Query  898  GTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAA  971
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  480  GTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAA  553

Query  972  GCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGGGGGAGTTTT  1045
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  554  GCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTT  627

Query 1046  CCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCA  1119
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  628  CCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTGATTGAGTCA  701

Query 1120  GGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCT  1193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  702  GGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCT  775

Query 1194  CTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATG  1267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  776  CTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGTTCAACGATG  849

Query 1268  AAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGAT  1341
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  850  AAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAATCTCTAACAACATCACCCTCCGAGAAGAT  923

Query 1342  CAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATG  1415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  924  CAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGAACTCTTATG  997

Query 1416  CTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACC  1489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  998  CTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACC  1071

Query 1490  CTACTGATAGGGACTCCATATGGAAG------------------------------------------------  1515
            ||||||||||||||||||||||||||                                                
Sbjct 1072  CTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTG  1145

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1146  GTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGCTTATATTGC  1219

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1220  AGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCGAGCATTGTTCTCAGGCACTATGCCTA  1293

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1294  CCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTGCCAGGTAGAAAACTGGTGTCATCAGCTGTTT  1367

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1368  CTCCCAGCATCATACCTCAAGAGGATCCTTCGCAGCAGCTCCTGCAGCAGAGCCTTGAAGGAGTGTGTAGTCTT  1441

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1442  CAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATCAGGCCTTGCAGGAAAAGTCGTGGAAT  1515

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1516  GTAGCTGCCCCTTCGTATTTGAAGCAGAGTGATTTGGCCTCAGCAGCAGCGAAACAGACTTTACCCCTTATTTG  1589

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1590  GGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTTCAGAGGACACATGAACCATTAACAAGAAAAATATTT  1663

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1664  AAATAAGAAACTCACCAAGCCAGGAGAATAATGAATACCTGGATGTGCCCCCTAGGAATCTGGATCTCTTCTCT  1737

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1738  TTTCCCCACCCTGCCCTCAACTCCCCTTACATACATACAGCCTGGATCACAAGACCCAAGAAAACCATTCCACC  1811

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1812  AGCTGCTGAGAGAAGAGCCACAAAAGGACCCAGAACTTCTCCATGGCTACCTTAGAGCACCCTAAAATGTGCTA  1885

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1886  ACAGCCATTGTTAGCATTCAGGAGCTGTTTATTCCCATTTTCACACTACACTAAAGAATTTTAAACAATCACAA  1959

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1960  GATAGACTGGCTGGAAGTTGGTGCTTGGAACATCCCACGTCACCTAAAAGCACAGTGCTGCAATCTCAGAAACC  2033

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2034  CCAGGCTCAGCCAGCAGAGAGAGGAGAAGCAGCTGGACATTGGAGACTATGATTGGACATTAGAGAGAAGGAGC  2107

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2108  TTGACTTCACAGAGAAAGCATGATGGAATAATTTCAGAGAAAAGTCTGGCCAGGGATGACCAGACTTCAGGGGA  2181

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2182  AGATAATCTTGCTCAATATCCTTTTCTGCTCCCCTTCCTGCTGAGAGTCACTTTGATTGGCAATAAAATATCTC  2255

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2256  ACATTTACCATCTTCAATTTGTTCTTGCAACCTCATTCCTCCTGGATGCCAGACAAGAACTCAGGTGCCATGAG  2329

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2330  TATGGGTGCAAAAGGCTATCACACTGTCCCTCCACTGAGCTGTTAACACTTAAGCTATCCATGGACAGCAAAGC  2403

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2404  TAAAAGGGCACTGTAAGAGTCCTTCTGGGGTTTCAGAAGTCATGAGCATCCCCCAGATGCTGCCATGGGGCCAG  2477

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2478  TACAGAGTTTGCTCCTGCCAGAGTCCAAAAATGTCTCAGCTCCTGCACCCAGTCACCTGCATGCTCCCCCTCCC  2551

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2552  ACAAGTGGTGGAGCACAGTGGGCTGAGTGAGTGGAGTTTGCCCCTGCCAGCACCCGTGCACTCCAGTTCCCACC  2625

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2626  TGTGAAGGTGTCAGAGAGATATTCTGCTTAAAAATCAGAGTGACTCCATCTTAAATAGCAGCTGGGTGAGATAA  2699

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2700  GGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCTAACCTTCTATCAGGATGAGATAGAAGGCCA  2773

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2774  GCATAAGATATAGGTCACGAAGACTCTGCTGATAAAACAGGATGTGGTTTAAATAAATGCCAGCCAGAACCCAC  2847

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2848  CAAAACCAAGATGGTGATGCTCATTCTCACTGCTCATTATATGCCAGTATAATGCATTTGCATGCAAAAAGACT  2921

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2922  CTACCACCAGTGCCATGACAGCTTACAGATGCCATGGCAAGATCTGGAAGTTACCCTGTAGCCTCTAAAATGGG  2995

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2996  GAAGAACCCTCAGTTCTGGAAAATTTCTGCCCCTTTCCTGAAAAACTCATGAATAATCTACCCTTTGTTTAGCA  3069

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3070  TATAATCAAGAAACAACTATAAGTATAGTCAATCGAGCAGCCAATCTCACCGCTCTGTCTATGGAGTAGTCATT  3143

Query 1516  -------------------------------------------  1515
                                                       
Sbjct 3144  CTTTTATTTACATCTCTAATAAAATTGCTTTCACTTTACTGTA  3186

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