Nucleotide Global Alignment

Description

Query:
TRCN0000470961
Subject:
NR_146906.1
Aligned Length:
4265
Identities:
1018
Gaps:
3172

Alignment

Query    1  ATGGCGGCGCACCTTAAGAAGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCTAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  ATTCTCTTGGAACATTATTACAAGGAGAATGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCA--TCAA----CATCCTGCAGAATGAAA  364
                  ||..||.|||   .|..||||||.|         |.|||||  ||.|    |.|||||      |.||
Sbjct    1  ------GAGGGCGGGA---GCGGCAGACTCC---------GCTGCCAGCTCTACTGGCGTCCTG------GCAA  50

Query  365  AG---------------TCTCATCAAGTCCTAGCTCAACTGCTGGATACT------TTGCTTGCAATTGGCACT  417
            .|               .|||  |..|||| ||||   ||.|.||   ||      ||.|||||        ||
Sbjct   51  GGGCAGCGCCGAGGGGCGCTC--CCGGTCC-AGCT---CTCCCGG---CTCGGGGGTTCCTTGC--------CT  107

Query  418  AAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCA------AGCATCTG---ACAGA  482
            |.|| .||||||...|..|||..|    ||| .|..|..|.|||||||||||      .||| |||   .|.||
Sbjct  108  AGGC-GCCAGAGCCCCGGGCTCCC----TGC-CTCGGCCGCTGTGGCCTGCATAGAGCGGCA-CTGCGCGCGGA  174

Query  483  TACGTCTCATGGTGTAAGA-AATAA--------GTGCC--------TGCAGTTACTTGGCAATCTTGGCTCTTT  539
            ..||    ||||   .||| ||.||        |||.|        |||||     .|||        |.||..
Sbjct  175  GGCG----ATGG---GAGAGAAGAAGGAGGGCGGTGGCGGGGGTGATGCAG-----CGGC--------CGCTGA  228

Query  540  GGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGATTATAGGGGATTACTTCA  613
            ||      |||.|         ||||..|.||   |.|||||      ||.|         |||     ||.||
Sbjct  229  GG------GTGGC---------GCAGGGGCCC---CGGCCAG------CCCG---------GGG-----CTGCA  264

Query  614  GTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGC-CAT-GTTGCAGCTCCAT--GAA-----AGAGGA  678
            |    ||        ||| ||||    |||||..|.|||| ||| |  |||.||||||  |.|     .|.||.
Sbjct  265  G----CA--------GTG-CAGA----CAGCTCCAGAAGCTCATCG--GCATCTCCATTGGCAGCCTGCGCGGG  319

Query  679  CTG------AAAT------------------TACACCAAACAATTTATA---ATC----AGGCCTGTAAATTAC  721
            |||      ||.|                  | ||||.|.||....|||   |.|    |||||||||||||||
Sbjct  320  CTGGGCACCAAGTGCGCTGTGTCCAACGACCT-CACCGAGCAGGAGATACGGACCCTGGAGGCCTGTAAATTAC  392

Query  722  TCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAA  795
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||.|||||||||||||||||||||
Sbjct  393  TCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCTAGCTTATCTGGGTTGTCAGTCAGCTCTATCCTGAA  466

Query  796  AGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACAT  869
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  467  AGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTGTCACAT  540

Query  870  GGTCAGTGATGGCTCTTGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTC  943
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  GGTCAGTGATGGCTCTTGGGTGGTTCATGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTC  614

Query  944  ATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCC  1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  615  ATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCC  688

Query 1018  AAGGAACTTTACAGTTCGGGGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGA  1091
            |||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  689  AAGGAACTTTACAGTTCAGGGGAGTTTTCCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGAAGTAGA  762

Query 1092  TACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATG  1165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  763  TACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATG  836

Query 1166  AGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTT  1239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  837  AGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTT  910

Query 1240  GATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAAT  1313
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  911  GATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAGAAAAAT  984

Query 1314  CTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATA  1387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  985  CTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATA  1058

Query 1388  TTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTG  1461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1059  TTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTG  1132

Query 1462  GAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAG--------------------  1515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct 1133  GAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAG  1206

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1207  TCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAAC  1280

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1281  CAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATG  1354

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1355  CGAGCATTGTTCTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTGCCA  1428

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1429  GGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATCCTTCGCAGCAGCTCCTGCA  1502

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1503  GCAGAGCCTTGAAGGAGTGTGTAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCA  1576

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1577  TCAGGCCTTGCAGGAAAAGTCGTGGAATGTAGCTGCCCCTTCGTATTTGAAGCAGAGTGATTTGGCCTCAGCAG  1650

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1651  CAGCGAAACAGAGACCTACAAAATGGAATTCATGTAGAGTGGTGTGGAGAATAAGCAGGTGGTGATTATACATC  1724

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1725  ACATGAGGCTGCAGGCCAAAGCTTTGCAACTTATAATAACAGCACGAACTACACGAGGACTTTACCCCTTATTT  1798

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1799  GGGATGTGTGAAAAATTTTTACAGGAAGTAGACTTTTTTCAGAGGTATTTCATCGCTGATTTGCCCCACTTGCA  1872

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1873  GGACAGCTTTGTGGACAAACTCCTTGACCTTATGCCCCGATTCATGACATCCAAACCTGCAGAAGTGGTCAAAA  1946

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1947  TTCTACAGACCATGCTGCGACAGAGTGCCTTTCTGCATCTCCCACTTCCAGAGCAGATCCACAAAGCCTCAGCC  2020

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2021  ACCATCATTGAGCCAGCAGGCGAGTCAGACAACCCTTTGCGGTTTACCTCTGGGTTGGTGGTTGCCCTGGATGT  2094

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2095  TGATGCAACCCTGGAGCATGTGCAGGATCCTCAGAACACTGTTAAGGTCCAGGTCCCAGAGAGCTACTCACTGC  2168

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2169  ATGTGTCTTTGACCTGCTGTTGATTCATCTCCTCTGCTAAGAAGGTGGCTGATGGCTGGGCTATTTACACCTAG  2242

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2243  GAGGGTGTTCCAGGCCAGGCCCCAGGGAGCCTAAAATAATCAAAAAGGACACATGAACCATTAACAAGAAAAAT  2316

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2317  ATTTAAATAAGAAACTCACCAAGCCAGGAGAATAATGAATACCTGGATGTGCCCCCTAGGAATCTGGATCTCTT  2390

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2391  CTCTTTTCCCCACCCTGCCCTCAACTCCCCTTACATACATACAGCCTGGATCACAAGACCCAAGAAAACCATTC  2464

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2465  CACCAGCTGCTGAGAGAAGAGCCACAAAAGGACCCAGAACTTCTCCATGGCTACCTTAGAGCACCCTAAAATGT  2538

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2539  GCTAACAGCCATTGTTAGCATTCAGGAGCTGTTTATTCCCATTTTCACACTACACTAAAGAATTTTAAACAATC  2612

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2613  ACAAGATAGACTGGCTGGAAGTTGGTGCTTGGAACATCCCACGTCACCTAAAAGCACAGTGCTGCAATCTCAGA  2686

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2687  AACCCCAGGCTCAGCCAGCAGAGAGAGGAGAAGCAGCTGGACATTGGAGACTATGATTGGACATTAGAGAGAAG  2760

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2761  GAGCTTGACTTCACAGAGAAAGCATGATGGAATAATTTCAGAGAAAAGTCTGGCCAGGGATGACCAGACTTCAG  2834

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2835  GGGAAGATAATCTTGCTCAATATCCTTTTCTGCTCCCCTTCCTGCTGAGAGTCACTTTGATTGGCAATAAAATA  2908

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2909  TCTCACATTTACCATCTTCAATTTGTTCTTGCAACCTCATTCCTCCTGGATGCCAGACAAGAACTCAGGTGCCA  2982

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2983  TGAGTATGGGTGCAAAAGGCTATCACACTGTCCCTCCACTGAGCTGTTAACACTTAAGCTATCCATGGACAGCA  3056

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3057  AAGCTAAAAGGGCACTGTAAGAGTCCTTCTGGGGTTTCAGAAGTCATGAGCATCCCCCAGATGCTGCCATGGGG  3130

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3131  CCAGTACAGAGTTTGCTCCTGCCAGAGTCCAAAAATGTCTCAGCTCCTGCACCCAGTCACCTGCATGCTCCCCC  3204

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3205  TCCCACAAGTGGTGGAGCACAGTGGGCTGAGTGAGTGGAGTTTGCCCCTGCCAGCACCCGTGCACTCCAGTTCC  3278

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3279  CACCTGTGAAGGTGTCAGAGAGATATTCTGCTTAAAAATCAGAGTGACTCCATCTTAAATAGCAGCTGGGTGAG  3352

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3353  ATAAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAGGCATTCTAACCTTCTATCAGGATGAGATAGAAG  3426

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3427  GCCAGCATAAGATATAGGTCACGAAGACTCTGCTGATAAAACAGGATGTGGTTTAAATAAATGCCAGCCAGAAC  3500

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3501  CCACCAAAACCAAGATGGTGATGCTCATTCTCACTGCTCATTATATGCCAGTATAATGCATTTGCATGCAAAAA  3574

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3575  GACTCTACCACCAGTGCCATGACAGCTTACAGATGCCATGGCAAGATCTGGAAGTTACCCTGTAGCCTCTAAAA  3648

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3649  TGGGGAAGAACCCTCAGTTCTGGAAAATTTCTGCCCCTTTCCTGAAAAACTCATGAATAATCTACCCTTTGTTT  3722

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 3723  AGCATATAATCAAGAAACAACTATAAGTATAGTCAATCGAGCAGCCAATCTCACCGCTCTGTCTATGGAGTAGT  3796

Query 1516  -----------------------------------------------  1515
                                                           
Sbjct 3797  CATTCTTTTATTTACATCTCTAATAAAATTGCTTTCACTTTACTGTA  3843

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