Nucleotide Global Alignment
Description
- Query:
- TRCN0000470961
- Subject:
- XM_006507179.3
- Aligned Length:
- 2889
- Identities:
- 1384
- Gaps:
- 1374
Alignment
Query 1 ATGGCGGCGCACCTTAAGAAGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCTAC 74
||||||||||||||.||.||||||||.||||||||.|||||.|||||||||||||..|||||||||||||||||
Sbjct 1 ATGGCGGCGCACCTGAAAAAGCGGGTGTATGAGGAGTTCACTAAAGTGGTTCAGCAGCAGGAGGAAATTGCTAC 74
Query 75 TAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAG 148
.|||||.||||||.|||||||.||.||.||||||||.||.|||||||||||||||||||||||.||||||||||
Sbjct 75 CAAGAAGCTCCGATTAACAAAGCCGAGCAAATCTGCCGCTCTCCACATAGATCTGTGTAAAGCCACCTCCCCAG 148
Query 149 CAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGG 222
|||||||||||||.|||.|.||||||||||||||.||||||||.||.||.||.||.||.|||||.|||||||||
Sbjct 149 CAGATGCTTTGCAGTACCTACTCCAGTTTGCCAGAAAGCCTGTAGAAGCAGAGAGTGTGGAGGGGGTAGTCAGG 222
Query 223 ATTCTCTTGGAACATTATTACAAGGAGAATGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATT 296
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.|.|||||.|||||
Sbjct 223 ATTCTCTTGGAACATTATTACAAGGAAAATGATCCATCTGTGAGACTGAAAATTGCATCACTCTTGGGATTATT 296
Query 297 ATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTC 370
|||||||||.||||||||.||.|||||||||||.|||||.||.|||||.|||||.||.||||||||||||||||
Sbjct 297 ATCAAAGACGGCAGGATTCTCTCCAGACTGCATAATGGACGACGCCATTAACATACTACAGAATGAAAAGTCTC 370
Query 371 ATCAAGTCCTAGCTCAACTGCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAA 444
|.|||||.|||||||||||.|||||.|||||||||||||||||||.|||.||||||||.||||||||||.||||
Sbjct 371 ACCAAGTGCTAGCTCAACTACTGGACACTTTGCTTGCAATTGGCAGTAAACTACCAGAAAATCAAGCTACCCAA 444
Query 445 ATGCGATTAGTTGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTT 518
.||||||||||.|||||||||||||||||.|||||||||||.||.|||||||||||||||||||||.||||.||
Sbjct 445 GTGCGATTAGTGGATGTGGCCTGCAAGCACCTGACAGATACTTCCCATGGTGTAAGAAATAAGTGCTTGCAATT 518
Query 519 ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGA 592
|||||||||||||||||||||||||||||||||||||||||||.|.||||||..|||||||||||||||.||||
Sbjct 519 ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATACTGAAGGCTCAGCTGCCAGAGATGTTCAGA 592
Query 593 AGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTC 666
|.|||||.|||||..||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct 593 AAATTATCGGGGACCACTTCAGTGACCAAGATCCACGGGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTC 666
Query 667 CATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTCTCTGATGACTATGAACA 740
|||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||
Sbjct 667 CATGAAAGAGGACTGAAGTTACACCAAACGATTTATAATCAGGCCTGTAAATTGCTCTCTGATGACTACGAGCA 740
Query 741 AGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTT 814
.||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.||.|
Sbjct 741 GGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTTGTCAGCCAGCTCTATCCTGAGAGTATAGTTCCAATACCGT 814
Query 815 CTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGG 888
||||||||||||||||.||..|||||||||||||.|||||.||||||||.||||||||||||||||||||.|||
Sbjct 815 CTTCTAATGAAGAAATCCGTCTAGTTGATGATGCATTTGGAAAAATTTGCCACATGGTCAGTGATGGCTCCTGG 888
Query 889 GTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCT 962
||||||||||||||.||.|||||.||.||||||||.|||||||||||.||.||||||||||||||||||||.||
Sbjct 889 GTGGTTCGTGTTCAAGCTGCAAAGCTATTGGGCTCGATGGAGCAAGTTAGCTCTCATTTCTTGGAGCAGACTCT 962
Query 963 TGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGG 1036
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 963 TGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGCACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGG 1036
Query 1037 GGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTG 1110
|||||||||||||||||||.||.|||||||||||||||||||||||||||.||||.||.|||||.||||||.||
Sbjct 1037 GGGAGTTTTCCAGTGGCAGGAAATGGGGAGATGATGCTCCCAAGGAAGAAATAGACACGGGGGCCGTGAACCTG 1110
Query 1111 ATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGT 1184
||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1111 ATAGAGTCAGGAGCGTGTGGAGCCTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGCATTGCTGCTGT 1184
Query 1185 GGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGT 1258
||||||.||.||||||.|.|||||||||||.||||||||||||||.|||||||||||.||.|||||||||||||
Sbjct 1185 GGAGGCTCTGTGCATGCTAGCCCAGTCTTCGCCCTCTTTTGCTGAAAAGTGCCTTGACTTTCTAGTTGACATGT 1258
Query 1259 TCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTC 1332
||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||.|||||||||
Sbjct 1259 TCAATGATGAAATTGAGGAAGTGCGTCTGCAGTCCATACACACCATGAGAAAAATCTCTAACAATATCACCCTC 1332
Query 1333 CGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGA 1406
|||||||||||||||||||||||||||||||||.||||||||||||||||.||||||.||||||||||||||||
Sbjct 1333 CGAGAAGATCAGCTTGACACTGTCCTGGCTGTGTTAGAGGATTCATCCAGGGATATTAGAGAGGCTCTTCATGA 1406
Query 1407 ACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAA 1480
||||||||||||.||||||||.|||||||||||||||||||||||||||.||||||||||.||.|||||..|||
Sbjct 1407 ACTCTTATGCTGCACTAATGTCTCAACCAAAGAAGGGATTCATCTTGCACTGGTGGAGCTTCTAAAAAACCTAA 1480
Query 1481 CCAAGTACCCTACTGATAGGGACTCCATATGGAAG--------------------------------------- 1515
||||||||||||||||.||||||||||||||||||
Sbjct 1481 CCAAGTACCCTACTGACAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGCAGCCGGCATCCGACCCTCGTG 1554
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1555 CTTCCTCTGGTGCCAGAGCTCTTGAGCACGCACCCATTTTTTGATACTGCTGAACCAGACATGGACGATCCAGC 1628
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1629 TTACATTGCAGTTTTAGTTCTTATCTTCAATGCTGCTAAGACCTGTCCTACAATGCCAGCACTCTTCTCAGACC 1702
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1703 ACACCCTCAGGCACTATGCCTACCTCCGAGACAGCCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGGAGA 1776
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1777 AAACTGGTGTCCTCCACTGTCCCCTCTAACATCACCCCTCATGAAGATCCTTCCCAGCAGTTCCTGCAGCAGAG 1850
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1851 CCTTGAAAGGGTGTATAGTGTTCAGCACCTAGATCCTCAGGGGGCCCAAGAGCTGCTGGAATTCACCATCAGAG 1924
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1925 ATCTGCAAAGACTTGGAGAGCTTCAGTCTGAATTGGCAGGAGTAGCTGACTTCTCTGCCACCTATCTTCAGTGT 1998
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 1999 CAACTGCTCCTCATTAAGGCCTTGCAGGAAAAGCTGTGGAATGTGGCTGCCCCCTTGTATCTAAAGCAGAGTGA 2072
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2073 TTTGGCCTCAGCAGCAGCAAAACAGATCATGGAGGAAACCTACAAAATGGAGTTTATGTACAGTGGTGTGGAAA 2146
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2147 ACAAGCAGGTTGTGATCATACAGCACATGAGGCTTCAGGCCAAAGCTCTGCAACTCATAGTAACTGCACGAACT 2220
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2221 ACTCGAGGAGTAGACCCCTTATTTGGAATGTGTGAAAAATTTTTACAGGAAGTGGATTTTTTTCAGAGGTGTTT 2294
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2295 CATTGCGGATTTGCCCCACCTTCAAGATAGCTTTGTGGACAAACTCCTTGATCTTATGCCCCGACTCATGGCAT 2368
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2369 CTAAACCTGTTGAAGTGATCAAAATTCTGCAGACAATGCTGCGGCAGAGCACCTTCTTACATCTTCCGCTTCCA 2442
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2443 GAGCAGATACACAAAGCCTCAGCCACCATTATTGAGCCGGCAGGAGAGTCAGACAATCCTTTGCGGTTTACATC 2516
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2517 TGGGTTGGTGGTAGCCTTGGATGTGGATGCAACCCTGGAACATGTGCAAGACCCCCAGAACACTGTCAAGGTTC 2590
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2591 AGGTCTTATATCCAGATGGCCAGGCTCAGATGATCCACCCCAAGCCAGCAGATTTCCGGAATCCTGGCCCAGGA 2664
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2665 CGGCACCGTCTCCTCACTCAGGTGTACCTCTCCCATACTGCCTGGACAGAACCATGCCAAGTGGAAGTGAGGCT 2738
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2739 ATTGCTGGCCTACAACTCCGGTGCACGAATTCCAAAATCTCCATGGCTGGAGGGTAGTGAGATGTCACCACAGG 2812
Query 1516 -------------------------------------------------------------------------- 1515
Sbjct 2813 TGGAAACCAGCATCGAGGGCACCATCCCCTTCAGTAAGCCTGTGAAAGTCTACATAATGCCCAAGCCTGCAAGA 2886
Query 1516 --- 1515
Sbjct 2887 CGC 2889
