Nucleotide Global Alignment

Description

Query:
TRCN0000470961
Subject:
XM_006507179.3
Aligned Length:
2889
Identities:
1384
Gaps:
1374

Alignment

Query    1  ATGGCGGCGCACCTTAAGAAGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCTAC  74
            ||||||||||||||.||.||||||||.||||||||.|||||.|||||||||||||..|||||||||||||||||
Sbjct    1  ATGGCGGCGCACCTGAAAAAGCGGGTGTATGAGGAGTTCACTAAAGTGGTTCAGCAGCAGGAGGAAATTGCTAC  74

Query   75  TAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAG  148
            .|||||.||||||.|||||||.||.||.||||||||.||.|||||||||||||||||||||||.||||||||||
Sbjct   75  CAAGAAGCTCCGATTAACAAAGCCGAGCAAATCTGCCGCTCTCCACATAGATCTGTGTAAAGCCACCTCCCCAG  148

Query  149  CAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGG  222
            |||||||||||||.|||.|.||||||||||||||.||||||||.||.||.||.||.||.|||||.|||||||||
Sbjct  149  CAGATGCTTTGCAGTACCTACTCCAGTTTGCCAGAAAGCCTGTAGAAGCAGAGAGTGTGGAGGGGGTAGTCAGG  222

Query  223  ATTCTCTTGGAACATTATTACAAGGAGAATGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATT  296
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||.|.|||||.|||||
Sbjct  223  ATTCTCTTGGAACATTATTACAAGGAAAATGATCCATCTGTGAGACTGAAAATTGCATCACTCTTGGGATTATT  296

Query  297  ATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTC  370
            |||||||||.||||||||.||.|||||||||||.|||||.||.|||||.|||||.||.||||||||||||||||
Sbjct  297  ATCAAAGACGGCAGGATTCTCTCCAGACTGCATAATGGACGACGCCATTAACATACTACAGAATGAAAAGTCTC  370

Query  371  ATCAAGTCCTAGCTCAACTGCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAA  444
            |.|||||.|||||||||||.|||||.|||||||||||||||||||.|||.||||||||.||||||||||.||||
Sbjct  371  ACCAAGTGCTAGCTCAACTACTGGACACTTTGCTTGCAATTGGCAGTAAACTACCAGAAAATCAAGCTACCCAA  444

Query  445  ATGCGATTAGTTGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTT  518
            .||||||||||.|||||||||||||||||.|||||||||||.||.|||||||||||||||||||||.||||.||
Sbjct  445  GTGCGATTAGTGGATGTGGCCTGCAAGCACCTGACAGATACTTCCCATGGTGTAAGAAATAAGTGCTTGCAATT  518

Query  519  ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGA  592
            |||||||||||||||||||||||||||||||||||||||||||.|.||||||..|||||||||||||||.||||
Sbjct  519  ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATACTGAAGGCTCAGCTGCCAGAGATGTTCAGA  592

Query  593  AGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTC  666
            |.|||||.|||||..||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  593  AAATTATCGGGGACCACTTCAGTGACCAAGATCCACGGGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTC  666

Query  667  CATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTCTCTGATGACTATGAACA  740
            |||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||
Sbjct  667  CATGAAAGAGGACTGAAGTTACACCAAACGATTTATAATCAGGCCTGTAAATTGCTCTCTGATGACTACGAGCA  740

Query  741  AGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTT  814
            .||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.||.|
Sbjct  741  GGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTTGTCAGCCAGCTCTATCCTGAGAGTATAGTTCCAATACCGT  814

Query  815  CTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGG  888
            ||||||||||||||||.||..|||||||||||||.|||||.||||||||.||||||||||||||||||||.|||
Sbjct  815  CTTCTAATGAAGAAATCCGTCTAGTTGATGATGCATTTGGAAAAATTTGCCACATGGTCAGTGATGGCTCCTGG  888

Query  889  GTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCT  962
            ||||||||||||||.||.|||||.||.||||||||.|||||||||||.||.||||||||||||||||||||.||
Sbjct  889  GTGGTTCGTGTTCAAGCTGCAAAGCTATTGGGCTCGATGGAGCAAGTTAGCTCTCATTTCTTGGAGCAGACTCT  962

Query  963  TGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGG  1036
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct  963  TGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGCACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGG  1036

Query 1037  GGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTG  1110
            |||||||||||||||||||.||.|||||||||||||||||||||||||||.||||.||.|||||.||||||.||
Sbjct 1037  GGGAGTTTTCCAGTGGCAGGAAATGGGGAGATGATGCTCCCAAGGAAGAAATAGACACGGGGGCCGTGAACCTG  1110

Query 1111  ATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGT  1184
            ||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1111  ATAGAGTCAGGAGCGTGTGGAGCCTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGCATTGCTGCTGT  1184

Query 1185  GGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGT  1258
            ||||||.||.||||||.|.|||||||||||.||||||||||||||.|||||||||||.||.|||||||||||||
Sbjct 1185  GGAGGCTCTGTGCATGCTAGCCCAGTCTTCGCCCTCTTTTGCTGAAAAGTGCCTTGACTTTCTAGTTGACATGT  1258

Query 1259  TCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTC  1332
            ||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||.|||||||||
Sbjct 1259  TCAATGATGAAATTGAGGAAGTGCGTCTGCAGTCCATACACACCATGAGAAAAATCTCTAACAATATCACCCTC  1332

Query 1333  CGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGA  1406
            |||||||||||||||||||||||||||||||||.||||||||||||||||.||||||.||||||||||||||||
Sbjct 1333  CGAGAAGATCAGCTTGACACTGTCCTGGCTGTGTTAGAGGATTCATCCAGGGATATTAGAGAGGCTCTTCATGA  1406

Query 1407  ACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAA  1480
            ||||||||||||.||||||||.|||||||||||||||||||||||||||.||||||||||.||.|||||..|||
Sbjct 1407  ACTCTTATGCTGCACTAATGTCTCAACCAAAGAAGGGATTCATCTTGCACTGGTGGAGCTTCTAAAAAACCTAA  1480

Query 1481  CCAAGTACCCTACTGATAGGGACTCCATATGGAAG---------------------------------------  1515
            ||||||||||||||||.||||||||||||||||||                                       
Sbjct 1481  CCAAGTACCCTACTGACAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGCAGCCGGCATCCGACCCTCGTG  1554

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1555  CTTCCTCTGGTGCCAGAGCTCTTGAGCACGCACCCATTTTTTGATACTGCTGAACCAGACATGGACGATCCAGC  1628

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1629  TTACATTGCAGTTTTAGTTCTTATCTTCAATGCTGCTAAGACCTGTCCTACAATGCCAGCACTCTTCTCAGACC  1702

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1703  ACACCCTCAGGCACTATGCCTACCTCCGAGACAGCCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGGAGA  1776

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1777  AAACTGGTGTCCTCCACTGTCCCCTCTAACATCACCCCTCATGAAGATCCTTCCCAGCAGTTCCTGCAGCAGAG  1850

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1851  CCTTGAAAGGGTGTATAGTGTTCAGCACCTAGATCCTCAGGGGGCCCAAGAGCTGCTGGAATTCACCATCAGAG  1924

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1925  ATCTGCAAAGACTTGGAGAGCTTCAGTCTGAATTGGCAGGAGTAGCTGACTTCTCTGCCACCTATCTTCAGTGT  1998

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 1999  CAACTGCTCCTCATTAAGGCCTTGCAGGAAAAGCTGTGGAATGTGGCTGCCCCCTTGTATCTAAAGCAGAGTGA  2072

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2073  TTTGGCCTCAGCAGCAGCAAAACAGATCATGGAGGAAACCTACAAAATGGAGTTTATGTACAGTGGTGTGGAAA  2146

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2147  ACAAGCAGGTTGTGATCATACAGCACATGAGGCTTCAGGCCAAAGCTCTGCAACTCATAGTAACTGCACGAACT  2220

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2221  ACTCGAGGAGTAGACCCCTTATTTGGAATGTGTGAAAAATTTTTACAGGAAGTGGATTTTTTTCAGAGGTGTTT  2294

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2295  CATTGCGGATTTGCCCCACCTTCAAGATAGCTTTGTGGACAAACTCCTTGATCTTATGCCCCGACTCATGGCAT  2368

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2369  CTAAACCTGTTGAAGTGATCAAAATTCTGCAGACAATGCTGCGGCAGAGCACCTTCTTACATCTTCCGCTTCCA  2442

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2443  GAGCAGATACACAAAGCCTCAGCCACCATTATTGAGCCGGCAGGAGAGTCAGACAATCCTTTGCGGTTTACATC  2516

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2517  TGGGTTGGTGGTAGCCTTGGATGTGGATGCAACCCTGGAACATGTGCAAGACCCCCAGAACACTGTCAAGGTTC  2590

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2591  AGGTCTTATATCCAGATGGCCAGGCTCAGATGATCCACCCCAAGCCAGCAGATTTCCGGAATCCTGGCCCAGGA  2664

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2665  CGGCACCGTCTCCTCACTCAGGTGTACCTCTCCCATACTGCCTGGACAGAACCATGCCAAGTGGAAGTGAGGCT  2738

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2739  ATTGCTGGCCTACAACTCCGGTGCACGAATTCCAAAATCTCCATGGCTGGAGGGTAGTGAGATGTCACCACAGG  2812

Query 1516  --------------------------------------------------------------------------  1515
                                                                                      
Sbjct 2813  TGGAAACCAGCATCGAGGGCACCATCCCCTTCAGTAAGCCTGTGAAAGTCTACATAATGCCCAAGCCTGCAAGA  2886

Query 1516  ---  1515
               
Sbjct 2887  CGC  2889

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