Nucleotide Global Alignment

Description

Query:
TRCN0000470987
Subject:
XM_011539952.2
Aligned Length:
2064
Identities:
1185
Gaps:
851

Alignment

Query    1  ATGGGCACCTTGCGGGATTTACAGTACGCGCTCCAGGAGAAGATCGAGGAGCTGAGGCAGCGGGATGCTCTCAT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGCACCTTGCGGGATTTACAGTACGCGCTCCAGGAGAAGATCGAGGAGCTGAGGCAGCGGGATGCTCTCAT  74

Query   75  CGACGAGCTGGAGCTGGAGTTGGATCAGAAGGACGAACTGATCCAGAAGCTGCAGAACGAGCTGGACAAGTACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGACGAGCTGGAGCTGGAGTTGGATCAGAAGGACGAACTGATCCAGAAGCTGCAGAACGAGCTGGACAAGTACC  148

Query  149  GCTCGGTGATCCGACCAGCCACCCAGCAGGCGCAGAAGCAGAGCGCGAGCACCTTGCAGGGCGAGCCGCGCACC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTCGGTGATCCGACCAGCCACCCAGCAGGCGCAGAAGCAGAGCGCGAGCACCTTGCAGGGCGAGCCGCGCACC  222

Query  223  AAGCGGCAGGCGATCTCCGCCGAGCCCACCGCCTTCGACATCCAGGATCTCAGCCATGTGACCCTGCCCTTCTA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGCGGCAGGCGATCTCCGCCGAGCCCACCGCCTTCGACATCCAGGATCTCAGCCATGTGACCCTGCCCTTCTA  296

Query  297  CCCCAAGAGCCCACAGTCCAAGGATCTTATAAAGGAAGCTATCCTTGACAATGACTTTATGAAGAACTTGGAGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCCCAAGAGCCCACAGTCCAAGGATCTTATAAAGGAAGCTATCCTTGACAATGACTTTATGAAGAACTTGGAGC  370

Query  371  TGTCGCAGATCCAGGAGATTGTGGATTGTATGTACCCGGTGGAGTATGGCAAGGACAGTTGCATCATCAAAGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGTCGCAGATCCAGGAGATTGTGGATTGTATGTACCCGGTGGAGTATGGCAAGGACAGTTGCATCATCAAAGAA  444

Query  445  GGAGACGTGGGGTCACTGGTGTATGTCATGGAAGATGGTAAGGTTGAAGTTACAAAAGAAGGTGTGAAGTTGTG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGAGACGTGGGGTCACTGGTGTATGTCATGGAAGATGGTAAGGTTGAAGTTACAAAAGAAGGTGTGAAGTTGTG  518

Query  519  TACCATGGGTCCAGGAAAAGTGTTTGGGGAATTGGCTATTCTTTACAACTGTACCCGGACAGCGACCGTCAAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TACCATGGGTCCAGGAAAAGTGTTTGGGGAATTGGCTATTCTTTACAACTGTACCCGGACAGCGACCGTCAAGA  592

Query  593  CTCTTGTAAATGTAAAACTCTGGGCCATTGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCTTGTAAATGTAAAACTCTGGGCCATTGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATC  666

Query  667  AAGCATACCGAGTATATGGAATTTTTAAAAAGCGTTCCAATATTCCAGAGCCTTCCTGAAGAGATCCTCAGCAA  740
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  667  AAGCATACCGAGTATATGGAATTTTTAAAAAGCGTTCCAACATTCCAGAGCCTTCCTGAAGAGATCCTCAGCAA  740

Query  741  GCTTGCTGATGTCCTTGAAGAGACCCACTATGAAAATGGAGAATATATTATCAGGCAAGGTGCAAGAGGGGACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCTTGCTGATGTCCTTGAAGAGACCCACTATGAAAATGGAGAATATATTATCAGGCAAGGTGCAAGAGGGGACA  814

Query  815  CCTTCTTTATCATCAGCAAAGGAACGGTAAATGTCACTCGTGAAGACTCACCGAGTGAAGACCCAGTCTTTCTT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCTTCTTTATCATCAGCAAAGGAACGGTAAATGTCACTCGTGAAGACTCACCGAGTGAAGACCCAGTCTTTCTT  888

Query  889  AGAACTTTAGGAAAAGGAGACTGGTTTGGAGAGAAAGCCTTGCAGGGGGAAGATGTGAGAACAGCAAACGTAAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGAACTTTAGGAAAAGGAGACTGGTTTGGAGAGAAAGCCTTGCAGGGGGAAGATGTGAGAACAGCAAACGTAAT  962

Query  963  TGCTGCAGAAGCTGTAACCTGCCTTGTGATTGACAGAGACTCTTTTAAACATTTGATTGGAGGGCTGGATGATG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGCTGCAGAAGCTGTAACCTGCCTTGTGATTGACAGAGACTCTTTTAAACATTTGATTGGAGGGCTGGATGATG  1036

Query 1037  TTTCTAATAAAGCATATGAAGATGCAGAAGCTAAAGCAAAATATGAAGCTGAAGCGGCTTTCTTC-GCCAACCT  1109
            ||||||||||||||||||||||||||||||||||||||||                  .|||.|| |..|.|.|
Sbjct 1037  TTTCTAATAAAGCATATGAAGATGCAGAAGCTAAAGCAAA------------------GTTCATCAGGGAGCAT  1092

Query 1110  GAAGCTGTCTGATTTCAACATCATTGATACCCTTGGAGTTGGAGGTTTCGGACGAGTAGAACTG-GTCCAGTTG  1182
            .|.||||          .||||  ||.|||   ||                          ||| |.||     
Sbjct 1093  AATGCTG----------GCATC--TGCTAC---TG--------------------------CTGTGGCC-----  1120

Query 1183  AAAAGTGAAGAATCCAAAACGTTTGCAATGAAGATTCTCAAGAAA-CGTCACATTGTGGACACAAG--ACAGCA  1253
                                                ||| ||||| |.||..|||.||| ||.|||  |.||.|
Sbjct 1121  ------------------------------------CTC-AGAAAGCTTCCAATTATGG-CAGAAGGCAAAGAA  1156

Query 1254  GGAGCACATCCGCTCAGAGAAGCAGATCATGCAGGGGGCTCATTCCGATTTCATAAGTGAGACTGTACAAGAAC  1327
            |||||              |.|||.||||  ||.||                               |||||.|
Sbjct 1157  GGAGC--------------AGGCATATCA--CATGG-------------------------------CAAGAGC  1183

Query 1328  ATTTAAGGACAGCAAATATTTGTATATGTTGATGGAAGCTGTCTAGGTGGAGAGCTCTGGACCATTCTCAGGGA  1401
            |      || |.|||               ||  ||.|.||       ||||||.||                 
Sbjct 1184  A------GA-AACAA---------------GA--GAGGGTG-------GGAGAGGTC-----------------  1209

Query 1402  TAGAGGTTCGTTTGAAGATTCTACAACCAGATTTTACACAGCATGTGTGGTAGAAGCTTTTGCCTATCTGCATT  1475
                                      |||||.|||                                       
Sbjct 1210  --------------------------CCAGACTTT---------------------------------------  1218

Query 1476  CCAAAGGAATCATTTACAGGGACCTCAAGCCAGAAAATCTCATCCTAGATCACCGAGGTTATGCCAAACTGGTT  1549
                                                                                      
Sbjct 1219  --------------------------------------------------------------------------  1218

Query 1550  GATTTTGGCTTTGCAAAGAAAATAGGATTTGGAAAGAAAACATGGACTTTTTGTGGGACTCCAGAGTATGTAGC  1623
                                                                                      
Sbjct 1219  --------------------------------------------------------------------------  1218

Query 1624  CCCAGAGATCATCCTGAACAAAGGCCATGACATTTCAGCCGACTACTGGTCACTGGGAATCCTAATGTATGAAC  1697
                                                                                      
Sbjct 1219  --------------------------------------------------------------------------  1218

Query 1698  TCCTGACTGGCAGCCCACCTTTCTCAGGCCCAGATCCTATGAAAACCTATAACATCATATTGAGGGGGATTGAC  1771
                                                                                      
Sbjct 1219  --------------------------------------------------------------------------  1218

Query 1772  ATGATAGAATTTCCAAAGAAGATTGCCAAAAATGCTGCTAATTTAATTAAAAAACTATGCAGGGACAATCCATC  1845
                                                                                      
Sbjct 1219  --------------------------------------------------------------------------  1218

Query 1846  AGAAAGATTAGGGAATTTGAAAAATGGAGTAAAAGACATTCAAAAGCACAAATGGTTTGAGGGCTTTAACTGGG  1919
                                                                                      
Sbjct 1219  --------------------------------------------------------------------------  1218

Query 1920  AAGGCTTAAGAAAAGGTACCTTGACACCTCCTATAATACCAAGTGTTGCATCACCCACAGACACAAGTAATTTT  1993
                                                                                      
Sbjct 1219  --------------------------------------------------------------------------  1218

Query 1994  GACAGTTTCCCTGAGGACAACGATGAACCACCACCTGATGACAACTCAGGATGGGATATAGACTTC  2059
                                                                              
Sbjct 1219  ------------------------------------------------------------------  1218

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