Nucleotide Global Alignment

Description

Query:
TRCN0000470987
Subject:
XM_017016413.1
Aligned Length:
2060
Identities:
1753
Gaps:
306

Alignment

Query    1  ATGGGCACCTTGCGGGATTTACAGTACGCGCTCCAGGAGAAGATCGAGGAGCTGAGGCAGCGGGATGCTCTCAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGACGAGCTGGAGCTGGAGTTGGATCAGAAGGACGAACTGATCCAGAAGCTGCAGAACGAGCTGGACAAGTACC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCTCGGTGATCCGACCAGCCACCCAGCAGGCGCAGAAGCAGAGCGCGAGCACCTTGCAGGGCGAGCCGCGCACC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AAGCGGCAGGCGATCTCCGCCGAGCCCACCGCCTTCGACATCCAGGATCTCAGCCATGTGACCCTGCCCTTCTA  296
                                                                   ||||               
Sbjct    1  -------------------------------------------------------ATGT---------------  4

Query  297  CCCCAAGAGCCCACAGTCCAAGGATCTTATAAAGGAAGCTATCCTTGACAATGACTTTATGAAGAACTTGGAGC  370
               ||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    5  ---CAAG--------GTCCAAGGATCTTATAAAGGAAGCTATCCTTGACAATGACTTTATGAAGAACTTGGAGC  67

Query  371  TGTCGCAGATCCAGGAGATTGTGGATTGTATGTACCCGGTGGAGTATGGCAAGGACAGTTGCATCATCAAAGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   68  TGTCGCAGATCCAGGAGATTGTGGATTGTATGTACCCGGTGGAGTATGGCAAGGACAGTTGCATCATCAAAGAA  141

Query  445  GGAGACGTGGGGTCACTGGTGTATGTCATGGAAGATGGTAAGGTTGAAGTTACAAAAGAAGGTGTGAAGTTGTG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  142  GGAGACGTGGGGTCACTGGTGTATGTCATGGAAGATGGTAAGGTTGAAGTTACAAAAGAAGGTGTGAAGTTGTG  215

Query  519  TACCATGGGTCCAGGAAAAGTGTTTGGGGAATTGGCTATTCTTTACAACTGTACCCGGACAGCGACCGTCAAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  216  TACCATGGGTCCAGGAAAAGTGTTTGGGGAATTGGCTATTCTTTACAACTGTACCCGGACAGCGACCGTCAAGA  289

Query  593  CTCTTGTAAATGTAAAACTCTGGGCCATTGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  290  CTCTTGTAAATGTAAAACTCTGGGCCATTGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATC  363

Query  667  AAGCATACCGAGTATATGGAATTTTTAAAAAGCGTTCCAATATTCCAGAGCCTTCCTGAAGAGATCCTCAGCAA  740
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  364  AAGCATACCGAGTATATGGAATTTTTAAAAAGCGTTCCAACATTCCAGAGCCTTCCTGAAGAGATCCTCAGCAA  437

Query  741  GCTTGCTGATGTCCTTGAAGAGACCCACTATGAAAATGGAGAATATATTATCAGGCAAGGTGCAAGAGGGGACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  438  GCTTGCTGATGTCCTTGAAGAGACCCACTATGAAAATGGAGAATATATTATCAGGCAAGGTGCAAGAGGGGACA  511

Query  815  CCTTCTTTATCATCAGCAAAGGAACGGTAAATGTCACTCGTGAAGACTCACCGAGTGAAGACCCAGTCTTTCTT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  512  CCTTCTTTATCATCAGCAAAGGAACGGTAAATGTCACTCGTGAAGACTCACCGAGTGAAGACCCAGTCTTTCTT  585

Query  889  AGAACTTTAGGAAAAGGAGACTGGTTTGGAGAGAAAGCCTTGCAGGGGGAAGATGTGAGAACAGCAAACGTAAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  586  AGAACTTTAGGAAAAGGAGACTGGTTTGGAGAGAAAGCCTTGCAGGGGGAAGATGTGAGAACAGCAAACGTAAT  659

Query  963  TGCTGCAGAAGCTGTAACCTGCCTTGTGATTGACAGAGACTCTTTTAAACATTTGATTGGAGGGCTGGATGATG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  660  TGCTGCAGAAGCTGTAACCTGCCTTGTGATTGACAGAGACTCTTTTAAACATTTGATTGGAGGGCTGGATGATG  733

Query 1037  TTTCTAATAAAGCATATGAAGATGCAGAAGCTAAAGCAAAATATGAAGCTGAAGCGGCTTTCTTCGCCAACCTG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  734  TTTCTAATAAAGCATATGAAGATGCAGAAGCTAAAGCAAAATATGAAGCTGAAGCGGCTTTCTTCGCCAACCTG  807

Query 1111  AAGCTGTCTGATTTCAACATCATTGATACCCTTGGAGTTGGAGGTTTCGGACGAGTAGAACTGGTCCAGTTGAA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  808  AAGCTGTCTGATTTCAACATCATTGATACCCTTGGAGTTGGAGGTTTCGGACGAGTAGAACTGGTCCAGTTGAA  881

Query 1185  AAGTGAAGAATCCAAAACGTTTGCAATGAAGATTCTCAAGAAACGTCACATTGTGGACACAAGACAGCAGGAGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  882  AAGTGAAGAATCCAAAACGTTTGCAATGAAGATTCTCAAGAAACGTCACATTGTGGACACAAGACAGCAGGAGC  955

Query 1259  ACATCCGCTCAGAGAAGCAGATCATGCAGGGGGCTCATTCCGATTTCATAAGTGAGACTGTACAAGAACATTTA  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct  956  ACATCCGCTCAGAGAAGCAGATCATGCAGGGGGCTCATTCCGATTTCAT-AGTGAGACTGTAC-AGAACATTTA  1027

Query 1333  AGGACAGCAAATATTTGTATATGTTGATGGAAGC-TGTCTAGGTGGAGAGCTCTGGACCATTCTCAGGGATAGA  1405
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1028  AGGACAGCAAATATTTGTATATGTTGATGGAAGCTTGTCTAGGTGGAGAGCTCTGGACCATTCTCAGGGATAGA  1101

Query 1406  GGTTCGTTTGAAGATTCTACAACCAGATTTTACACAGCATGTGTGGTAGAAGCTTTTGCCTATCTGCATTCCAA  1479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  GGTTCGTTTGAAGATTCTACAACCAGATTTTACACAGCATGTGTGGTAGAAGCTTTTGCCTATCTGCATTCCAA  1175

Query 1480  AGGAATCATTTACAGGGACCTCAAGCCAGAAAATCTCATCCTAGATCACCGAGGTTATGCCAAACTGGTTGATT  1553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176  AGGAATCATTTACAGGGACCTCAAGCCAGAAAATCTCATCCTAGATCACCGAGGTTATGCCAAACTGGTTGATT  1249

Query 1554  TTGGCTTTGCAAAGAAAATAGGATTTGGAAAGAAAACATGGACTTTTTGTGGGACTCCAGAGTATGTAGCCCCA  1627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  TTGGCTTTGCAAAGAAAATAGGATTTGGAAAGAAAACATGGACTTTTTGTGGGACTCCAGAGTATGTAGCCCCA  1323

Query 1628  GAGATCATCCTGAACAAAGGCCATGACATTTCAGCCGACTACTGGTCACTGGGAATCCTAATGTATGAACTCCT  1701
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1324  GAGATCATCCTGAACAAAGGCCATGACATTTCAGCCGACTACTGGTCACTGGGAATCCTAATGTATGAACTCCT  1397

Query 1702  GACTGGCAGCCCACCTTTCTCAGGCCCAGATCCTATGAAAACCTATAACATCATATTGAGGGGGATTGACATGA  1775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398  GACTGGCAGCCCACCTTTCTCAGGCCCAGATCCTATGAAAACCTATAACATCATATTGAGGGGGATTGACATGA  1471

Query 1776  TAGAATTTCCAAAGAAGATTGCCAAAAATGCTGCTAATTTAATTAAAAAACTATGCAGGGACAATCCATCAGAA  1849
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472  TAGAATTTCCAAAGAAGATTGCCAAAAATGCTGCTAATTTAATTAAAAAACTATGCAGGGACAATCCATCAGAA  1545

Query 1850  AGATTAGGGAATTTGAAAAATGGAGTAAAAGACATTCAAAAGCACAAATGGTTTGAGGGCTTTAACTGGGAAGG  1923
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1546  AGATTAGGGAATTTGAAAAATGGAGTAAAAGACATTCAAAAGCACAAATGGTTTGAGGGCTTTAACTGGGAAGG  1619

Query 1924  CTTAAGAAAAGGTACCTTGACACCTCCTATAATACCAAGTGTTGCATCACCCACAGACACAAGTAATTTTGACA  1997
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620  CTTAAGAAAAGGTACCTTGACACCTCCTATAATACCAAGTGTTGCATCACCCACAGACACAAGTAATTTTGACA  1693

Query 1998  GTTTCCCTGAGGACAACGATGAACCACCACCTGATGACAACTCAGGATGGGATATAGACTTC  2059
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1694  GTTTCCCTGAGGACAACGATGAACCACCACCTGATGACAACTCAGGATGGGATATAGACTTC  1755

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