Nucleotide Global Alignment
Description
- Query:
- TRCN0000471890
- Subject:
- NR_033427.2
- Aligned Length:
- 3976
- Identities:
- 1034
- Gaps:
- 2942
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTTTCTTTAGCCGGGTCCCGCTAACTCGGCTACGGTGTATCTGCGTCTTTGGTCAGGTTGTTCCTTGGCTAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGGCAGTCGTCGCGGACCCACGCGGTTAGCAAGGCTTAGTGCTCGGGCCGGCCGCCTTCACTTCCCTCCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTTCCTCCCGACTTATCCACTTTAGGGGCGTCTCGGAGTGCCGGAGGCCCCCGGGGAAGAGCGGGGTGCCGG 222
Query 1 -----------------------------------------------ATGTTCAGTCTGATGGCCAGTTGCTGC 27
|||||||||||||||||||||||||||
Sbjct 223 TGTCCGCTCCGGGCTCGGATGGGAAGTGGTGGGAGGAGCGACCCGGGATGTTCAGTCTGATGGCCAGTTGCTGC 296
Query 28 GGCTGGTTCAAGCGGTGGCGGGAGCCTGTCAGAAAGGTGACTCTTTTGATGGTGGGACTTGATAATGCTGGTAA 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCTGGTTCAAGCGGTGGCGGGAGCCTGTCAGAAAGGTGACTCTTTTGATGGTGGGACTTGATAATGCTGGTAA 370
Query 102 AACCGCAACAGCAAAGGGAATCCAAGGAGAATACCCTGAAGATGTAGCTCCTACTGTTGGATTTTCAAAAATTA 175
|||||||||||||||||||||||||||||
Sbjct 371 AACCGCAACAGCAAAGGGAATCCAAGGAG--------------------------------------------- 399
Query 176 ACCTTAGACAAGGAAAGTTTGAAGTCACCATCTTTGACTTGGGAGGTGGAATAAGAATTCGGGGAATCTGGAAG 249
Sbjct 400 -------------------------------------------------------------------------- 399
Query 250 AATTACTATGCTGAATCCTATGGGGTAATATTTGTTGTGGATTCCAGTGATGAAGAGAGAATGGAAGAGACAAA 323
Sbjct 400 -------------------------------------------------------------------------- 399
Query 324 AGAGGCTATGTCAGAAATGCTAAGACATCCTAGGATATCGGGAAAGCCTATATTGGTGTTGGCAAATAAACAAG 397
|||||||||||||||||
Sbjct 400 ---------------------------------------------------------GTTGGCAAATAAACAAG 416
Query 398 ATAAAGAAGGAGCTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTCTGGAAAAATTGGTCAATGAGCACAAG 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 417 ATAAAGAAGGAGCTTTAGGAGAAGCTGATGTCATTGAATGTCTATCTCTGGAAAAATTGGTCAATGAGCACAAG 490
Query 472 TGCCTGTGTCAGATA-----GAACCATGTTCAGCAATCTCGGGGTATGGAAAGAAAATTGACAAGTCCATTAAA 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 491 TGCCTGTGTCAGATAGTAAGGAACCATGTTCAGCAATCTCGGGGTATGGAAAGAAAATTGACAAGTCCATTAAA 564
Query 541 AAAGGCCTTTATTGGCTGCTACATGTTATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGAGAC 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 565 AAAGGCCTTTATTGGCTGCTACATGTTATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGAGAC 638
Query 615 AACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAGAAA 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 AACAGAGCAGCGTGCTCTTGAGGAACAAGAGAAACAAGAAAGAGCTGAACGAGTGCGAAAATTACGAGAAGAAA 712
Query 689 GAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACG 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 713 GAAAACAAAATGAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGCTGAGTTGGACCCAGAACCAACG 786
Query 763 AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGAGAGAAAAAAAACCAAAA 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 AATCCTTTCCAGCCAATAGCATCTGTAATCATTGAGAATGAAGGAAAACTTGAAAGAGAGAAAAAAAACCAAAA 860
Query 837 AATGGAGAAAGACAGTGATGGCTGCCACCTGAAACATAAAATGGAGCATGAGCAAATAGAGACACAAGGCCAGG 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 861 AATGGAGAAAGACAGTGATGGCTGCCACCTGAAACATAAAATGGAGCATGAGCAAATAGAGACACAAGGCCAGG 934
Query 911 TTAATCACAATGGCCAAAAAAATAATGAATTTGGACTAGTAGAAAATTATAAGGAGGCATTAACACAGCAGTTA 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 935 TTAATCACAATGGCCAAAAAAATAATGAATTTGGACTAGTAGAAAATTATAAGGAGGCATTAACACAGCAGTTA 1008
Query 985 AAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAAAACTAAGAAACTAAGAAT 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 AAGAATGAAGATGAGACAGACCGGCCATCATTGGAATCAGCTAATGGTAAAAAGAAAACTAAGAAACTAAGAAT 1082
Query 1059 GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCC 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1083 GAAAAGGAACCACCGGGTAGAACCACTTAATATAGATGACTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCC 1156
Query 1133 CTCCTCCTGTTGGCTGGGGAACCCCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCAT 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 CTCCTCCTGTTGGCTGGGGAACCCCTAAAGTCACTAGACTTCCAAAACTTGAGCCTCTTGGTGAAACACATCAT 1230
Query 1207 AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTGAT 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1231 AATGATTTCTATAGGAAGCCACTGCCTCCCCTGGCTGTGCCACAGCGACCTAACAGTGATGCTCATGATGTGAT 1304
Query 1281 CTCA---------------------------------------------------------------------- 1284
||||
Sbjct 1305 CTCATAAACAAGACGTATGGAGGAGTTCTCTTAATATCAGCAAGGTGAACTGGGACATTCTTCTTTCTCAGAAG 1378
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1379 AAGAAACATCTTGTAAATTGATGACTGGGGCAAGATAACCATAATAATTTTAGTGAGAAGATTAATACTCAAGG 1452
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1453 ACCTGACTTGATAATTACTTATTTGTGTTTTTCATGGTTAAAAAAATAAAAGAAGCACAATGACCAGTACATGA 1526
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1527 AATCAGCATTTGGACCAAATTAGCAAGATTTACTGTTGACTCTGGTTTATACATCCCCACTCATGAGCATACTT 1600
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1601 CTGAAGGAAAACTTTACAAAAAGAGCCAATGGACTCAGCACTTTCTTTACTATTTGTTCAATAGCCTATATTTC 1674
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1675 TAGATATTAAATATTTTTTGTAAGATATATGCACATAGAAGGGGGACTTCTAGGAATTTATAACCAAAATTTTA 1748
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1749 AAACTATTTTTATATTTTTTTAAATCTTTAAAAATTTTAATTACTGTGATATTGATTATACACCTTTTTTATAG 1822
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1823 ATGATTTGTTTAAATTATATCTGGAAAATAGAGTTGATTTACTTTCAGACATGAACTATACAAACAGGATATAT 1896
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1897 TTATATGGCTTGAGGTATGTTTTGTAATAGCGTTGTTCTTTAAGTGTACATCGTAATTTGACCTAATTTAAAAA 1970
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 1971 TAATATATTTTCGAAGTAGTAGATTCTCAGATCTTTATTCTAACAATTACATGATTTGAAAACAGTACTCAATG 2044
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2045 AGACTGGAAATACCTTTTGTACCTAAATGTTTTTTAAATTAATCAAAATACATTCTGTGAGATACTATTAAAAG 2118
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2119 TCTCAGTAAAGTCCTATTTTAAAGGTTAGACACTTTCAGAGATCAAGGTGCTCCCTATACTCCCTTGTTCCATC 2192
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2193 AGAAGCTGCAGTGACTCTTTTAGGTGATTCTAATTCTTTCATGCCTTGAAATTAAACTATGAAATTAAAGGCAG 2266
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2267 AAAAACTGGAAAACCTACTGCAGGTCCAGAGACTTCTGTTTTACAACTGGGAAACAGCTTGTGTACTAAAGTAA 2340
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2341 TGAGAATAAAAATGTTGGCCCAAAATTACTTTTATAAATAAATAATTCCAAAATAATTTCTTAATTTAAAATGA 2414
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2415 TAGCACTTCTCTTGCACTTAAGAATGGCATCCATAAGATTCTGTATTTGGCATTTAGACTAACTTCTAGATGTA 2488
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2489 TATTTTTAATAATAGATTCATAATGTTACATTTAATTGAAAACAAACCTTTATATCCAATGAAAATAGTATAAA 2562
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2563 CAGAATGATTTTTATACCACCTTGTTAAGATTGGTGCTTTTGGTAACTTGTACTGACACAACAGACATGTGCTA 2636
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2637 GTATCTGATAACATTAAGTACATTTTATGTCGTTTAATATAATTATTTACTTTAAAAATTGTACTTCAGAACAT 2710
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2711 CAGATTTTATTCACATTTTTTAACTCACTGAACTTTAATAATCAGGTCACCTGTACTCTAGTCAGCACTGTATA 2784
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2785 TATTCTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGCATTTGATTTCAGATCTAAAA 2858
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2859 TTCGTAACAACCTAAATTTGAGAGGTGGCTGAAATGTGATGAAAAGCAATACGAAAAGACAATGTAAACTTTGA 2932
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 2933 AAAGGATTTTAGAGGGAAAATTGCATAGCTTTTTGTAACATTTACTTAATTTTAAAACTAAACTCATACTTTTG 3006
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3007 CTATCTTTTTAATATTTATCTCGTTTGGGAGTATACGTGTTTTTAAAATTTGTGTTTTCTATCTGTTTACTATA 3080
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3081 GTGTAGCTACTGGCTTCATTTAATAAAAATAAATGATTTTGAAATTAAATATAATATAGAATTCACATTTTATA 3154
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3155 TAGCTCTCTCAAAAATTAATTTTTATTCCTTAAGCATTTTAAAAACATTTTAAAAAATGTTTTGTAAATCCAGG 3228
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3229 TGTATTTTAACAATTAAATGCCTATTTTGTTATATGTTATACTTTTATTCTTAATTCTGAATTTTGACATTTTC 3302
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3303 ACACAATAAAAATAATTTATATCAATATTCTGTTTCTCTTTTCAATTGGTAGATTTAAATGATTTCCTTTGGGT 3376
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3377 AATAAAATAGGTAAAGATTTTAAAATATGATTATTGAAAAACAGTTTAAATCAGTAGATTAAAATAATGCATTT 3450
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3451 TTTTGATACTTTACACACAAAACTTTTTTCTCTCTGCAAGTTTTTATGTATGTGGGAAAGAATTTGTGATTTTA 3524
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3525 AATGCAGCTACAAATAGCATTTCACCATATGATGTTAGAGGATTTGATGTCTGTCTTGCGTTAAAGCTGTTGGT 3598
Query 1285 -------------------------------------------------------------------------- 1284
Sbjct 3599 CAACAGATATGTTTTTATGTATTTAAAAGAGGCTCTTGTGTGCCTTTATGTGTAAAATGCATATTACGTAGTAT 3672
Query 1285 ------------------------------------------------------ 1284
Sbjct 3673 ACATGATATTGTATGTAACTGACTTCAAATATAAAACTATGCATAGAAACAACA 3726
