Nucleotide Global Alignment

Description

Query:
TRCN0000471893
Subject:
NR_158652.1
Aligned Length:
2943
Identities:
506
Gaps:
2409

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AACGGGAACCGGCGCCCGGAATGTCAGCGTGTGAAGTAGGCGCTGGCAACGCGGGGTTACCCGCTGTTATTGAG  74

Query    1  --------------------------------------------------------------------ATGGAA  6
                                                                                ||||||
Sbjct   75  GAGTAACGGCCCAGCGGACCACCCAGGCTTGAGGCAGCGGCGGGAACCACTCGGTTTGCTGCGATACCATGGAA  148

Query    7  GGAGGCGGGGGAAGCGGCAACAAAACCACAGGGGGATTGGCCGGCTTTTTCGGAGCCGGCGGAGCAGGTTACTC  80
            ||||||||||||||||||.|||||||||||||||.||||||||||||||||||||||||||.||||||||||||
Sbjct  149  GGAGGCGGGGGAAGCGGCGACAAAACCACAGGGGTATTGGCCGGCTTTTTCGGAGCCGGCGAAGCAGGTTACTC  222

Query   81  GCACGCGGATTTGGCTGGCGTCCCGCTAACTGGTATGAACCCTCTGTCTCCTTATTTAAATGTGGATCCACGAT  154
            ||||||||||||||||||||||||||                                                
Sbjct  223  GCACGCGGATTTGGCTGGCGTCCCGC------------------------------------------------  248

Query  155  ACCTCGTGCAGGATACAGATGAGT---TTATACCTACCGGAGCTAATAAAACCCGGGGCAGATTTGAGCTGGCC  225
                       |||||||||||||   ||.|||||||||||||||||||||||.||||||||||||||||||||
Sbjct  249  -----------GATACAGATGAGTTCATTTTACCTACCGGAGCTAATAAAACCTGGGGCAGATTTGAGCTGGCC  311

Query  226  TTCTTTACGATTGGAGGATGTTGCATGACAGGGGCTGCGTTTGGTGCAATGAATGGTCTTCGGCTAGGATTGAA  299
            |||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  312  TTCTTTACGATTGGAGGGTGTTGCATGACAGGGGCTGCGTTTGGGGCAATGAATGGTCTTCGGCTAGGATTGAA  385

Query  300  GGAAACCCAGAACATGGCCTGGTCCAAACCAAGAAATGTACAGATTTTGAATATGGTGACTAGGCAAGGGGCAC  373
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  386  GGAAACCCAGAACATGGCCTGGTCCAAACCAGGAAATGTACAGATTTTGAATATGGTGACTAGGCAAGGGGCAC  459

Query  374  TTTGGGCTAATACTCTAGGTTCTCTGGCTTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAGGT  447
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  460  TTTGGGCTAATACTCTAGGTTCTCTGGCGTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACACGAGGT  533

Query  448  GCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATGTACAG--GTGGTCT-  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ..||.|| 
Sbjct  534  GCAGAAGATGACCTTAACACAGTAGCAGCTGGAACCATGACAGGCATGTTGTATAAATGTACAGCCTCGGCCTC  607

Query  519  TCGA------GGGATAGCACGAGGTGGTCTGACAGGACTAACACTTACCAGCCTCTATGCACTATATAATAACT  586
            .|||      |||||.||| ||.|..||||       |...||||   |||      |||.|.||.|      |
Sbjct  608  CCGAGGTGCCGGGATTGCA-GATGGAGTCT-------CGTTCACT---CAG------TGCTCAATGT------T  658

Query  587  G--------GGAGCACA------TGAAAGGCTC--CTTGCTCCAACAGTCACTC--------------------  624
            |        ||||..||      |||   .|||  ||.|||.||||     |||                    
Sbjct  659  GCCCAGGCTGGAGTGCAGTGGCGTGA---TCTCGGCTAGCTACAAC-----CTCCACCTCCCAGCCGCCTGCCT  724

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct  725  TGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTGC  798

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct  799  CTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCCGGGCTGCCCAGTCTGGGAAGTGAGGAGCGCCTT  872

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct  873  TTCCCGGCTGCCATCCCGTCTAGGAAGTGAGGAGCGTCTCGGCCCGGCCACCCATCGTCTGAGATGAGGGGAGC  946

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct  947  GCCTCTGCCCCGCCGCCCCGTCTGGGATGTGAGGAGCGCCTCTGCCTGGCCGCGACCCCGTCTGGGAGTGTCAG  1020

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1021  AGATGGCTTTGGATTCCCCGTTCTGTGTGCTGCTGTCTGGCTCCTGAACCCAGCTGTAGAGGTGTGTGTCAATC  1094

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1095  CCAACTGGTGAAGTACTGAGAAGAAGCTACACAAAAGGCAGCAAAGTATTAGTAAGTGTACCTCTGACATTTTA  1168

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1169  ACCACCTCTGACTTTTCCATGGAATGGACAAGTAGTAGTCTCTGTCAGAGCTACATTTTAAAGGAGAAAAAGAA  1242

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1243  ACGTGAAGTCATGAACTGTTTATTTATGCTGTTATTTTTGTGTTTACTCACCTCATTTATATTGACTTGTAAAT  1316

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1317  TAGTAATTTCTGAACTATTATTTATCAATTCATTGCCTACATGTCAGCAAACAAATTTTCTTCTTAATAAAGAA  1390

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1391  TCCAGTTGCTGGGCACAATGGTTCACACCTGTAATCTCAGCACGTTTGGAGGGCAAGGCAGGAGGATTCCTTGG  1464

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1465  GGCTAGGAGTTCAAGACCAGCCTGGGCAATATAGCAAGATTTCATCTCTACAAAAAAATGAAAACATTGGCTGG  1538

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1539  GCATGGTGGCTCATTCCTATAGTTCAGGCTACTGAGGAGCCTGATGTAGGAGGATCACGTGACCCCAGTAGTTT  1612

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1613  GAGGCTGCAGTGAGCTATGATCCTAACACTGCTCTCCAGCCTGGGTGACACACCAAGTTGCCATCTCTTCAAAA  1686

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1687  AAGGAATCTAGAGACATCAGTGTGTGCACAAGCATGGTTTGTGAATTTGGAAGTGTGTATGTGCATAGTTGTGC  1760

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1761  TCAAGAATGTGTTGATGATTATACCTTCTCAGAATGAAGGTAATTTTTTTTTTTTCTTTTTTTTTGAGATGGAG  1834

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1835  TCTTGCTCTGTTGCCAGGCTGGAGTGCAGTGGTGCTCTCAGCTCACTGCAACCTCTGCCTCCCGGCTTCAAGCA  1908

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1909  GTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACACACCACCACTCCCGGCTAATTTTTTGTGTT  1982

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 1983  TTAGTAGAGACGGGGTTTTACCATGTTGGCCAGGATGGTCTCGATCCCCCGACCTTGTGATCCACCCACCTTGG  2056

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2057  CCTCCCAAAGTGTTGGGATTACAGGTGTGAGCCACCGTGCCTGGCCTGAAGGTCATTTTTATAAAGATCTCTCC  2130

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2131  ACGTCTTAGATTTGATTCTTCCTTTAAATATTTTTCTCATTGACATTTGAAAGCACCTGACCTTATATAAAATG  2204

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2205  AACAATTTTCATAACTCCATAAAAGGAGAATTATGGCATCATCTATTTCTTTCTCTTGTCTCATAAATCTAAAC  2278

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2279  CATCAACCTGCTTATTTTTGTATACTGTCACACTGTGTATTCCCTGCATTGAATGCCTGTCTGTTGACATTATC  2352

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2353  TGTAAAAATTGTGGGAAGTTTTCTGCACCCTGAAATTTCTGTTATGCGGATTAAATATCCACTATCCATGTTTT  2426

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2427  TCCAAGTCTTACAGTAGAAAGGGTAAATGCAGCCCTCACAGCAGCCTGTTGTTCGTCCTGCAAATGTGTTTCCA  2500

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2501  TCACATTACACAAAGCCTCTTTGTCTTCGTGGTTCTACCCTACTAATAAGTTTTTTAAAAAATTATGTAATGTG  2574

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2575  TGTATATACAAATACCTATATGTATGTGTGTACACATACAGCTGATATCTGCTGAGATTATGTATGCATGAACT  2648

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2649  ATAGAATTAACTTGTAATTTTAAGAAAATAAATTATTTTGTAAAGATAAATCTCATGTTTAAGAAGAGGAATTA  2722

Query  625  --------------------------------------------------------------------------  624
                                                                                      
Sbjct 2723  CAGTTGAATCATTTAGGGATGCCTCAGCCTAAACATAATATGGAAAAAGCCATAACCAAAAGTCATTTTAGAGT  2796

Query  625  ---------------------------------------------------------  624
                                                                     
Sbjct 2797  ACTGCTAGGTTACTCAACCTATCATCACATTTAATTAAAATGTCAGTTTGAACCATG  2853

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