Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
NR_015451.1
Aligned Length:
3326
Identities:
218
Gaps:
3081

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCAGTGAGATCAAACAAAACATACCCAATCAGTGAAGAAGCCAGGCCAGTCCCAAAAAGCCATTGGGGGGCCAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGACCCTCATCCATATACCACCAGATAACCAGAAAAACAAAAACACTGCACAGCTGCGGGATCACCACACTGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACTCAAATACCATAGCCCAATATTGGTATTTCCGAGCATGGATGTTTTTCCAGAGCTCTTCCAGGAACCGCCGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCACAAAGTTATCAGGAAAGGGCTGTTGCTCATACAAGACCCTCTGCCACTTTACCTCCTTGGTGTTTGTTAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGGTTGGGTACACATAATCCTTTCATTCAAACTCAGGCTAGTTTAATCATCCCTCTCACAGAGGTCCATGTGGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCTTGTTGATGACATTTTGAAATGAGACCTCCCTGGAAATTCCATGCCTTGGTTGATATTCTGCTGACCTTTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTGTTTTCAAAGGCAGCAATCCAGGCCAGGCCTACAATAGATGAGTTTGTCTCTGAGGCAGGATATAATACAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAAGTTCCTGGGGATGCGTGACTGGGAGATGGCAGTTGCCTGCCTTTTTCCTTGTAAGGGTTTTTTTTTTTTTT  592

Query    1  ---ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCC  71
               |||||||||.|||||||.||||||||||||||||||||||..|||||||||||||||||||||||||||||
Sbjct  593  GAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCTGCCTCC  666

Query   72  CAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGC--ACCACCACGCCCGGC  143
            ||||||||.||.|||||.||||||||||||||..||||||||||||||.||.|  ||  .||||||.|||.|||
Sbjct  667  CAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGC--GCCTGCCACCATGCCTGGC  738

Query  144  TAA---TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAA  214
            |||   ||||||||||||.||.||||||||||||..||.||||||.||||.||||||.||.|||||||||||  
Sbjct  739  TAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC--  810

Query  215  GTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA--------------------------------------  249
            |||||||| ||.|||.||||||||||||||.||.||                                      
Sbjct  811  GTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTGTAGGCGTGAGCCACTGCGCCCTGCCATGAGGGTAC  884

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  885  TTTTAAAGAAGATAACATCTTCCATGGTGTATTCAATGAGGTCGTGTCTGGAATTGTTCCCTTAAGGTGGAGGC  958

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  959  TGCTCTGTGGCCACTGTGCCTGGCGGTTGTATGATCCTGGGTTCCTGGGCAGAGAAGCCTCAGCCTCAGAGTGT  1032

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1033  TTGGGGCCTTTTCCTGCCGCTCCAAGGCTGAAGGAGAGGAGCTTAACCCCAACTGCACAGCGCTGATCACCACT  1106

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1107  TCCTGCAGTCATTCTTCCTAAATCTCAAAAACTCTTCTTTTGTAAGAGTAGATTCTTGCAAGATATTTTTCCCC  1180

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1181  TCCTGAGTTCTTACATTGCCAGAGTTCCATTTGGACCGTTTGAAATCTTGATGCATGAATAACTGGCTTCACAG  1254

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1255  ACTCTTGGCCGCCCACTACCTCGGTGTCCACTGGTGGAGTTCTGCAACTGGCAAAAGTCAAGAATGAAGGAAGC  1328

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1329  AAACTTCAGAACCACAATATTCATATTGAATCATTTTGTTGTTGCTCTATGAAGATAAGCTAATTTTCTTCCTG  1402

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1403  GAATCTCATAGGATTATTACTAAGGGCCAGGGAGATCCACTTCGTTCATTTAGTCACTCAGGAAGCATTGCTAA  1476

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1477  GCATCCCCCTGTACCTTCCCCTACAGCTCTCCTTCCAAAACGAAACATCCTTTGGAGTGTGTTGTCCTCCAGAA  1550

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1551  TCGAATGGATTCTATATGCTGCATTCAGTAACAGGTTGTGGAGACAAGTGTCTTTTCCTGAAATTGCTAAGTGT  1624

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1625  ATTTGGCAGTACTTTACTACTTGTGGATAGAACTGAGAGTGAGGTCAGTATCACCAAGCCTCTTGGATTTCTTC  1698

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1699  AGTAGTCTCATGGATAAGTGAATGTTTAAAGTAACTACTACTTTGTTGGCTCTTGGTTGGGTGGATGGATTCTC  1772

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1773  AGTCCTGGTGTTTTTAAAAATCTCATTCCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAG  1846

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1847  GCTGAGGCGGGCAGATCACCTGAGGTCAGGAATTCGAAACCAGCCTTACCAACATGGCAAAACCCATCTCTATT  1920

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1921  AAAAATACAAAAATTAGCCGGGTGTGGTGGCACGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGA  1994

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1995  ATCACTTGAACCCTGGAGGTGGTGGTTGCAATGAGCCGAGATTGCGCCATTGCACTCTAGCCTGGGTGACAGAG  2068

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2069  CGAGACTCCGTCTCAAAAAAAAAAAAAATCGCATTCCGTCTAAAGCAAGCTACAAAATGTGATTATTTATGTCA  2142

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2143  CGATATGACCCAGCCATAAATGTACTTCAGGTAAGAAGGACACTGACATGATATCTTACTGATCAAATGCAGTC  2216

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2217  AGTAGGTATATATGAACTTTTTTCTCTGTGAAGAAAAGCTATTAATAAGTTTGACTTAATAGGCCTATAGTATG  2290

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2291  CACATACTGGCCAAGATTCTAAATGGATTATTCAGCGGTTCTGTTTTTGTGGAGGTGCTTATTCTCATTTCTCC  2364

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2365  AAAGCCTTAAGATTCCTGGGAATAGAGGAAATGTTGCTGCCACCAGCTTTGCTGGTGAATTTCAAAGAGAATAG  2438

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2439  GTGTTTGCTGTTTGATTTCTAGTGACCTTTTGGCGAGCTCTGATTTATAGGTAGAACATTTGTGTTTCTTTTCA  2512

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2513  TTTTGAGGCCAGGTGGTAGAGTGGAAAGACTGGGAGCTGTCAGGAAACCAAGGCTTGGATCTCCACTCTGTTAT  2586

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2587  GTACCAGCTGGGGCAAATCAGGGCCCATTCCCAACTCCTTTAAAATGAAAGGACTAGACTTGGTCTTTAAGCTC  2660

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2661  CCTTCCGATTCTAACATTTGGTGGTAGCAGGATTGTGCACAAAGCTCCTAATTTAGAGAAAGATCTGGGTTTTA  2734

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2735  GTCTTTTCTCCTCTATCGCCGCCTTACCGGTTGTACAACATTGGACCAGCCATTCTCCCCAAGGCCTCGGCATT  2808

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2809  TTCATTGTTAAATGGGAACACTCCTAATTCACACTGTTGCTGTGAGGATTACATTTGGTAATGAATGATAGAAT  2882

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2883  GCTTTGTACATGGAAAAGGACTATACCTTTCTTTTTTAACTACAAAGGCGAACATGTAACCCTCTACCTGTGGG  2956

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2957  CGCACATTTGCTGTGGTGTTACGTTCCACTGGTAGCGCCCAACCTCCCTTCATTCAAGCACATTTTACGGGCCT  3030

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3031  ACAGGGAAGGTTTTCTTCCTGTCCTCTCCTAAGACTTGTTTATGTTCATCATCTCTTCTATACTAGAGCTGCAG  3104

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3105  TCTTACATTTGCTTACTTCCTGACATCCACCCCCACCCCAGTGATTTCTCCCCATCTCCACCTCTATATTATTT  3178

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3179  GAACTAAATGAATTCATGAATGAACAAATGAGTGGATGAATGAATGGTAATGGATAATGGGCTATGAAGTCATA  3252

Query  250  ----------------------------------------------------------------------  249
                                                                                  
Sbjct 3253  TTTAAAGGCACTATCTCATTTAAAAACAATCTAAATAAATAACTACAATGATAAAAAAAAAAAAAAAAAA  3322

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.