Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
NR_110280.3
Aligned Length:
5119
Identities:
220
Gaps:
4873

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTTGCTGTGGAAGCCCCATAGGCAGGAGGCCCCCGGGCAGCACATCCTGTCTGCTTGTGTCTGCTGCAGAGTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGTCCTTGCATTGGTGCGCCTCAGGCCAGGCTGCACTGCTGGGACCTGGGCCATGTCTCCCCACCCCACCGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTCCTGGGCCTAGCAAGAAGGATTACATGGAGACAGTGATGTCGAGGAGGGTTGGCTTGGTCGTTATGAAATGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGAATGCCCCCCAGCTCCATCGAGCCCCCTTTTGACAGCAGCCCCGTAAGGAGACTGGGCACTGGGCATTTTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCACTGGGGCTTCTCTTCCAGTGCTCTGCCTGGCCCAGACCATCCACACGCAGGAGGAAGATCTGCCCAGACCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCATCTCGGCTGAGCCAGGCACCGTGATCCCCCTGGGGAGCCATGTGACTTTCGTGTGCCGGGGCCCGGTTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGTTCAAACATTCCGCCTGGAGAGGGACAGTAGATCCACATACAATGATACTGAAGATGTGTCTCAAGCTAGTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CATCTGAGTCAGAGGCCAGATTCCGCATTGACTCAAAAGCTCTGGAGGCCCGGACTCCCCGGACACAGAGCCCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCTCCTCAGCTGGTCAGTAGCAGGGCCCTCAGCTGGAGGGGATTACAGGGGAATCTGTGCTGCGGATGCTGTTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGGGTCCAGCCCTCTGCCCTGGGCTTGGAGTCAAGGTCTAGGGAGGCCACGGGAAGGCACCGACACCCACCAAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTCTGGGAGGTCGCTAATGCTCACAGAGACCATAGCAGCAATGGACCCACGCAGAGGCCGTCGGACAACAGTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CAATGAGCATGCACCTGCTTCCCAAGGCCTGAAAGCTGAGCATCTGTATATTCTCATCGGGGTCTCAGTGGTCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCCTCTTCTGTCTCCTCCTCCTGGTCCTCTTCTGCCTCCATCGCCAGAATCAGATAAAGCAGGGGCCCCCCAGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGCAAGGACGAGGAGCAGAAGCCACAGCAGAGGCCTGACCTGGCTGTTGATGTTCTAGAGAGGACAGCAGACAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGCCACAGTCAATGGACTTCCTGAGAAGGACAGAGAGACGGACACCTCGGCCCTGGCTGCAGGGAGTTCCCAGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGGTGACGTATGCTCAGCTGGACCACTGGGCCCTCACACAGAGGACAGCCCGGGCTGTGTCCCCACAGTCCACA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAGCCCATGGCCGAGTCCATCACGTATGCAGCCGTTGCCAGACACTGACCCCATACCCACCTGGCCTCTGCACC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGAGGGTAGAAAGTCACTCTAGGAAAAGCCTGAAGCAGCCATTTGGAAGGCTTCCTGTTGGATTCCTCTTCATC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TAGAAAGCCAGCCAGGCAGCTGTCCTGGAGACAAGAGCTGGAGACTGGAGGTTTCTAACCAGCATCCAGAAGGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCGTTAGCCAGGTGGTCCCTTCTACAATCGAGCAGCTCCTTGGACAGACTGTTTCTCAGTTATTTCCAGAGACC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGCTACAGTTCCCTGGCTGTTTCTAGAGACCCAGCTTTATTCACCTGACTGTTTCCAGAGACCCAGCTAAAGT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CACCTGCCTGTTCTAAAGGCCCAGCTACAGCCAATCAGCCGATTTCCTGAGCAGTGATGCCACCTCCAAGCTTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCCTAGGTGTCTGCTGTGAACCTCCAGTGACCCCAGAGACTTTGCTGTAATTATCTGCCCTGCTGACCCTAAAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACCTTCCTAGAAGTCAAGAGCTAGCCTTGAGACTGTGCTATACACACACAGCTGAGAGCCAAGCCCAGTTCTCT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GGGTTGTGCTTTACTCCACGCATCAATAAATAATTTTGAAGGCCTCACATCTGGCAGCCCCAGGCCTGGTCCTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGTGCATAGGTCTCTCGGACCCACTCTCTGCCTTCACAGTTGTTCAAAGCTGAGTGAGGGAAACAGGACTTACG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAAACGTGTCAGCGTTTTCTTTTTAAAATTTAATTGATCAGGATTGTACGTATTCAAGGTGTAAAATGTGATAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTTGTCGTACACGTACATTGTGCAATGACAGTCACAATCAATTCCTCAGCGCACCCATCGCCACAGATACGATA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CATTAGATATTCTGAACTTGCTCATCTTAGGACTTCACATTGGTGTCAGTGTTTTCTGACAAATCACGTGTATC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGGAATGAATGAGGGAGGTGTGGCTGGGTGAAGGCAGAGAGCCGACCCTACAGGTCCACATCTGCACATACATG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CACAGGAATGCATGCTCTCACACACATGCATACACACACGCACACACACAGACATGCACATACACTCACACGCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCAGGAAATCCAAGGAATCACTGAGCCTGCTGTTGGTTGAGGCATTTCTGAGTATCCACCCTACCTGTAGGGTC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGATGTACTGATTGACACAGAAAATTACCCTATGTACCACTAGGAGGCGGCAGAATCTCATTTGGGTTAATCTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TGTTTGTCTTTAAAAAACAAAAACAGGCCGGGCATGGAGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TACAAAAAAATTAGCCGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGGAGGAGAATG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GCGTGAACCCGGGAGGCGGAGTTTGCAGTGAGCCGAGGTGGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GACTCCGTCAAAAAAGAAAAGAAAAGAAAAGAAAGATTTTTAAGAATTCAGCAAAAACTCAGCCAGCTCTTTCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATGGGGCAGTTGCTAATTTAGTTCTAGGCAAACGTGGACACATTAAATTCTCCTACAAACCCTCCACAGCGTGC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TCTATTATTTTCCTCATTTATAAAAACAGAAACTATGGACCGAGACATGAAGTAACCTGTCCAAGGTCGGCCAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GTCTCAGAGACAGGGGCTTCAGACCCACCTGAGGCTCCTGACTCCACATTATGAACCCCGGGATGGGCTGCAGC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TCGGTCTGCTGGGAGGTTTCTGTGCTGGTTCAAAGAGGGTGGTACCTGACTGGCCTACCCAATTTTAATTTGTA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  CTGAGCTTTAATTTTCTATTTGTGCTCAGGTTTAATTTCCTCCTGGGATCTGCTTCCCAGTGCTGTACTCTGTA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TCTTTGCTTTCTTGTGTGAACATTGTGACCGATTTTCCCTGTTCTTCACGTGGGACACATTCTCCCTGCTCTGT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CTGTCTCTGTCCCTGTCTCTCTTTCTGTCTTTCTCTCTCACTGTGTGTCTCTCTGTCTCTCTCTCTCTTTTTTT  3330

Query    1  -----------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACC  62
                       |||||||.|||||| |||||||||||||||||||||.||||...||||.||||||||||||||
Sbjct 3331  TTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTTGGCTCACTGCAACC  3404

Query   63  TCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCAC  136
            ||||||||||.|||||||||||||||.||||||||||||||.|||.||||||||.||.||.|||||||||||||
Sbjct 3405  TCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGCAGCTGGGATTACAGGCATGCACCACCAC  3478

Query  137  GCCCGGCTAA--TTTTGTATTTTTGGTCGAGACGGGG---TTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCC  205
            .|.|||||||  |||||||||||||.|.|||||||||   |.|  |||||||..||||||||||||||||||||
Sbjct 3479  ACACGGCTAATTTTTTGTATTTTTGTTAGAGACGGGGGGCTCT--CCATGTTGCTCAGGCTGGTCTTGAACTCC  3550

Query  206  TGACCTCAAGTGATC--CACCACCTCGGCCTCCCAAAGTGTTGAGA----------------------------  249
            .|||||||.||||||  | |||||||.||||||||||||..||.||                            
Sbjct 3551  CGACCTCAGGTGATCTGC-CCACCTCAGCCTCCCAAAGTCCTGGGATTACAGGCATGAGCCACTGCGTCCAGCC  3623

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3624  GTCTTTGTCTCTTTTTCTACATCTCTGTCTTTCTTCTCTGGTTGTTTTTCAACCATCAGCTGGGTGTTTTCTCC  3697

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3698  CATAACGTCTTGTTTGTTTGACTATGAGGTTGACAGGTGGGTACATGAACTCTATAGCAGAAGGTGGACAGTCT  3771

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3772  GCACATAGCAGAGGATGGGTGAATTTTTCTACCCCTTGCAGAGCACAGGAGAGCTGAGCAGATGCCAGTGTCTG  3845

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3846  CTCCAGTGTAAGGAAGTCCAGGAAGTTCAGGTGGTGAGGTCACAGTGGAAAGCAGGACAGATAGAGTTTAGGGG  3919

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3920  AAATTAAGCAAAAATACCACACTGTTATTTCTTGACATATTAGTGGAAAGAGGAAGGGCCCAGAGAGAAGACAG  3993

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3994  AAAATTAGATGCAGGGGCTTGTTTTTTCTCTTGACTTGCCAACCCGCCCAACGCAGGGGCCAGAACTCAGGGTG  4067

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4068  GTGAGATCTGGGAACATTGCTGTGCGGAGAAGATGTCCCTCCTGCTGCACGGGCCCCCAAGCACCACCTGGGGG  4141

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4142  AAGAGCCATGTTTAATTCACCTGGCAGTGCAGTGTGGCCAGGCAGAGAGGGAGGGCCTACCCTGTGCTTATGAT  4215

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4216  CCCACCCCAGTTCCCCTGGGGTGTGCCCTGGCGGTGAACACCAGGAGGCTGCAGTGGGGCCCAACGTGAAAGGG  4289

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4290  AGGAGCAGCCTCACCGGGGCCAGATGGGGCAGCAGCAGATATTCACAGATGTCCCTGTGAGTAACCAGGGCAGA  4363

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4364  GGCCAGGGGTCTGGCCTTCCCTTTCTTGGAGCCCTGGGCCAGCTGGGCAAGGCGTTGAGAGAAAGATTACCCGG  4437

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4438  TGACCTTTATCAAAGCAGAGTAAGGAGGGCTTTATTCAGAACCATCACTGTAGGTACCAGGACCCCAGCGGTGG  4511

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4512  GATTTTGTAGTAGGGGAAAGAAAATGGGCTCGACGTTGAATACAGCATGAACAAGTGAGAATGTTTGTTATACA  4585

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4586  AACTATAGGGTGGACTTTTTTTTTCTTTTTTTTAACTTTTTTTTACCTTTTAGTGTAAAACTGAACATAGAAAA  4659

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4660  TAAATTCATGAAGAAGGGATATTTTCTGAGGGTGTCCAGGGCTGCCCAACACCTCGTCTACCTTCTCTGTCATA  4733

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4734  GCCCCATTTAAAACACTCTCTCTGGATGAATACACCAAACCTCACAGTCTTTGCTCTCTTGCTAGGAAGAGGAG  4807

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4808  CAAGAGCGTGTTTCACTCTTGGCTCCTGCTTACACACCTGCTGTCCAATGGAAACTACTACTTAAGACATTTAA  4881

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4882  AAATAGTTGTGGTGATAGCATGTTGTGTTTTGGTTGGTGATGCCAGTTAGTCTCTGAAAACTTTCTGTGATGAG  4955

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4956  TGTAAAATTCTACACCTTAATCTCCTTTCTTGTAGGATCTGGGAAGCAGTATGCACTTGATTGCACCAAAGATT  5029

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 5030  TTACGTTCATAGAAAATTTCTGGCATCTGTGTGAAGAAAGTAAACTATATCTTCCATTTAGACAAATAAAATAT  5103

Query  250  -------------  249
                         
Sbjct 5104  CTTTTTGATAAAA  5116

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