Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
NR_134881.1
Aligned Length:
3042
Identities:
215
Gaps:
2796

Alignment

Query    1  -------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGC  67
                   |||||||||.||.||||.|||||||||||||||||.||||.|||||||||||||||||||||||...
Sbjct    1  TTTTGAGATGGAGTCTTGCCCTGTCGCCCAGGCTGGAGTGCAATGGCGTGATCTCGGCTCACTGCAACCTCCAT  74

Query   68  CTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCG  141
            |||||||||||||||.|||||.|||||||..|||||.||||||||||||.||.||.|.||..||||||||||||
Sbjct   75  CTCCCAGGTTCAAGCAATTCTCCTGCCTCCACCTCCCGAGTAGCTGGGATTACAGGCGTGTGCCACCACGCCCG  148

Query  142  GCTAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCA  213
            |||||  ||||||||.|||.||.||||.|||||||...|||.||.|.|||||||||||||||||||||||||| 
Sbjct  149  GCTAACTTTTTGTATCTTTAGTAGAGATGGGGTTTCAGCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTC-  221

Query  214  AGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA-------------------------------------  249
             |||||||||| ||||||||||.||||||||.|| ||                                     
Sbjct  222  -GTGATCCACCTACCTCGGCCTTCCAAAGTGCTG-GAATTATAGGCGTGAGCCACCAAGCCCGGCCTCCTCTTT  293

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  294  ATTTTTTATTTTGATTTATTTATTTTTGAGATGGGGGGGGTGTCTCGCTATGTTGACCAGGCTGGTCTCGAACT  367

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  368  CCTGGCCTCAAGCAGTTCTCCCTTCTTGGCCTCCCAAAGTGCTGGGATTACAGACATTAGCCACGGCGCCTGGC  441

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  442  CTTTTTCTTCTTCTTCTTCTTTGTTGAGACAGGGTCTCAATCTGTTGCCCAGGCTGGTCTCCAACTCCTGGGCT  515

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  516  CAGGTGATCCTTCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCATTAAGTGTTCCCCTTAATG  589

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  590  ACACAGCAGATGAGAGTTTTACTGAGTATCTCCTTGTGCCAGGCACCCTGTTGTTGCTGGGGAAGCGGAAGGGA  663

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  664  GAGACAATCGTTAATCGGCTAAATTTCTGCCTTCTGAGAGCTCAGAATCAAGAAATAAATAATAGGGCAGTAAA  737

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  738  AGGGGCTGGGATTACATACAAAAAGAAAATTAATGCCTGAACTTTTTACAATCTGCTCGATAAGCTTTAATTCT  811

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  812  ATTAACCTATTTGAGCTTCCCAACAACAGGCAAGCTCCCACAGCAGCTAGGAGGATCACTTTGTCGTCATACAA  885

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  886  ATAGAAACAGGCTCAGAGAGGAAGTCATTTGTTCTAGTTCTCACTAGGACAAATCTACTGGCTACTAAAAAAGT  959

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct  960  GTGAAGGCTGGGGACAGTTTGAGTCGTCCTGCTTGCACCTTAAGCGCCTACAAGAGTGCCCGGCTATAACAACC  1033

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1034  ACAATACCAATAATAAAATTTAAAAACAGATGTTCAGTAAGGACTTGCGGCATTAGGACCCCAGGAGGGAAGTG  1107

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1108  ACGTTCGAGGAGGCGGAGAAAGCCGCGAAGACGGCCTTCCCCACATCTTCCAGCACCTGCGCGCCTGAATCCGT  1181

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1182  CCCACCCAGGCCCAGACGCAGGCTTCTTCTCGGGTCTTGGTCCTGCATCCTCTCTCTCCCAGAGCCTCCGTTAG  1255

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1256  GGGGTGGGAAAGGACTTTGCCATAGGTCGCTGAGGCCACCATCTGCTCTCTTACTGGCCAAGGGCGTAAAAAGA  1329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1330  TAGTCTTCCCATTAGCTAGAGAGCAAACCCCAGAAAGCCTATTGGCTGCGCCGTCCGCGGGCCTTGGTCCGCTT  1403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1404  TGAAGGCGGGCTGCGGCTGCGAGAGGAGGGCGGGCGGGAGGCTAGCTGTTGTCGTGGTTGCTCGGAGGCACGTG  1477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1478  TGCAGTCCCGGAAGCGGCGAGGGGAAACTGCTCCGCGCGCGCCGCGGGAGGAGGAACCGCCCGGTCCTTTAGGG  1551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1552  TCCGGGCCCGGCCGGGCCATGGATTCAATGCCTGAGCCCGCGTCCCGCTGTCTTCTGCTTCTTCCCTTGCTGCT  1625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1626  GCTGCTGCTGCTGCTGCTGCCGGCCCCGGAGCTGGGCCCGAGCCAGGCCGGAGCTGAGGAGAACGACTGGGTTC  1699

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1700  GCCTGCCCAGCAAATGCGAAGGCTTGCGCCGGGACGCTGCGGCGGACGAGAGATCTGGTCCCGGTACCCCTGGA  1773

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1774  GTTCACACATTGTGTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCAAGACCAAGGAG  1847

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1848  GTGATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCCTCTGGAGTCAAATACACCAAGTCCATTTCAGATCC  1921

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1922  CCCAGACCAGATGACCTATCTTCCTTCCAGCTCTGAGTCACTTCCCATTGGGACTTGCGGTTAATCGAAGTCAC  1995

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1996  TGAGACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAGG  2069

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2070  GCATGTCAGAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGTGATGGACATCCCCTAT  2143

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2144  GAGCTGTGGAACGAGACTTCTGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGATGTGCTGGTGGAAGAGTTTGA  2217

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2218  GGAGGTGATCGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACGTGC  2291

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2292  TGAAGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGGG  2365

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2366  AAGAAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGGA  2439

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2440  GCTGGGTGGCCTTGAGGGAGACCCCAGCCCCGAGGAGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACACA  2513

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2514  GCCCCCCTGATGAGCTCTGAGCCCACCCAGCATCCTCTGTCCTGAGACCCCTGATTTTGAAGCTGAGGAGTCAG  2587

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2588  GGGCATGGCTCTGGCAGGCCGGGATGGCCCCGCAGCCTTCAGCCCCTCCTTGCCTTGGCTGTGCCCTCTTCTGC  2661

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2662  CAAGGAAAGACACAAGCCCCAGGAAGAACTCAGAGCCGTCATGGGTAGCCCACGCCGTCCTTTCCCCTCCCCAA  2735

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2736  GTGTTTCTCTCCTGACCCAGGGTTCAGGCAGGCCTTGTGGTTTCAGGACTGCAAGGACTCCAGTGTGAACTCAG  2809

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2810  GAGGGGCAGGTGTCAGAACTGGGCACCAGGACTGGAGCCCCCTCCGGAGACCAAACTCACCATCCCTCAGTCCT  2883

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2884  CCCCAACAGGGTACTAGGACTGCAGCCCCCTGTAGCTCCTCTCTGCTTACCCCTCCTGTGGACACCTTGCACTC  2957

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2958  TGCCTGGCCCTTCCCAGAGCCCAAAGAGTAAAAATGTTCTGGTTCTGATTTCTGAGTCCTCTGCAGCCCTCAAA  3031

Query  250  --------  249
                    
Sbjct 3032  AAAAAAAA  3039

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