Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
XR_001741754.1
Aligned Length:
4082
Identities:
217
Gaps:
3834

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTCCGGACCACCTCGCAGCGCCGCGTCCTTAGGGGCGGGCTCGGGGGGCACCACCCTCGAGGGGCGGAACCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGGGCGGTGGCGTGGATCCGGAGGTACCTGCTTCTTAAATGCTGCATTGAAAGGATGAAACAGAACGGATGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAACAAGAGTTCCCTGAGAAAGGACAGCTCTTAGAGAGATAGGATAATTACTGGACTCAAGAAGATACCAAATC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATGGTGTGCATTTCTGCGTTGTGTTTGGAAGAGGAACTAGGATTGTTATGAAAAGGAAGGATGTGTTCAACTTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAAGAATTAAACCTCAACCATCTGTCTCTTCCAAATGGCATTCTTGATTCTAAAAATCTTAAGTAGAGTGTAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTTATTGTTGGATACTGTAGTAGCCAGGCTAAGCTGAGCTATTCAGTGGAACAGATAAACCCGAAAATCTCAGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGCTTAACACAACAAGATTTATTTCTTTTTAGTATCACAATCTGATGTAGATTGGGTTGGTCTCCTGCTTGGCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTCCATCAAGTGACAGCTCAGGGATCCAAGTTGCTTTTATTTGGAAACTGTCATCTTGAGAGCATTTTGTTTCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCTGTATGGACAGGAGATCCAGAAGGTGTGGAGAAGTGCATCCTTCCTGGATCACAAATGATACATCACTTTA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCTCACATTCCATTGTTAAGAATTAGTGACATGATCCCACTGGGATTCATGGGGTCTGGGATATGGAACACTTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GATATTTGGCGAGCATGAACAATCTTTGCCATAGAAACATTGCCTCTATAATGTTATTCTATATCCCTTATCTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTCATGGTAGATTTCACATAGGATTAGTATCAGGAAAACGTTTTTCTCTCCTAAAATGTTGGTATTCTTCTTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCCCTCTGGAGTCAGGAACTTTAGATTTAATATTAATGACTATCTAATCTGAGATTTTTAGTAGCATCATGTA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCCTATTTCTCTATTGTGTTTCTGGAATAGTTTTATTATTGTATTTTAACTGACTAACTGTATTTGATTTTTTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAATTGCCATAATCCTTTCTAGTTTTAGCTGTTCATTTAATGAACACTTACCAATAGCAGATGTGTTGATAAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GATGAAGGATGTTTTTGGCTGCAACAGAAAAACTAATAAGTGGTTTAAGCAATAAGAGTTTAATTATCTGACAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAGAAGTCTGGCAGTTTCAGGATAGGTTAATTCAATGGTGTGATATCATAGAGGATCATGTATACTCACTTTTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTGTTTTATAAACTTCAGCGTTTGATGGTGTTCCCCCTTCCTGTCACATACAGGTTAGTAGTTCCAAGTGTTGC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTGTCATGGTAGACCCTAGTCAGGCCTGGGTCTTGTGACGCAGGAGACAAATATGCTCATAGACTTGTCGTTAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GACATGGCTGCAGTGTGGTGCCACCAGGCCTGCATCACGCCTACTCATCATATAATATTAGATTATATAGTCTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGGAAAATGTTGCAAAATGATACTGGTGGCAGGGTCAGAAATTGTATTCAGACTTTGATGTTAGATCCAGGCAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATGGCTTGTTGAAAAGAGATTTCTCTTTAGAGAGAAATCATGTTGGTGTACCAGGTGACATGTTTGGTTGGGGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGGGTGGGGGGACTGCTTGGATAGCATGGTAGTGATAGAAGTGTGATAAGCTGGATGCTGGATATAGTTAGAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGATTTACTGATCAATTGGATGTGAGGAGTGATATAGAGAGAGATGTTGGGAATGACTCCAAGTTTTGGCCTGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTGATGGGAAAAATTGAGTTGCTATTTATCAAGATAGGGAAGACCAATGAGTTTGGTGCTGTCATAAAATAAAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGTATCAGATTTTTAGCAACAACTGGAAGTAAGACATTGCAAGGAGTCTGGGCTGGGCTGAGATAGAGTTCAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGGGGAGCTGGAATCAGACTGCTGCCCCAGGTCCTGGGACCCTGCCATGCAGAAAAGACACCTGGCATGGGCAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GGACTCCAGTATGCCGGAGCCTCTTCCTCCTTTCTCAGGCCAAATTTGTGTCCTTGCAAAATTTGGCTACAAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GTTAAATTTACAAAGACCTCTGATACCCATTATCCCACCCAACTCTCTGGAGAGCCTTTGTAATGTGGTAACTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTCTTATGCACATAGCCAAAGACTTGAAAACAGTCTCAGAAAAGCTGTAATTTCTACCTTCATTCATTTAAAGA  2220

Query    1  ------------------------------------------------AT------GG---AGTCTCGCTCTGT  17
                                                            ||      ||   ||||||..|.|||
Sbjct 2221  AAACTTACTAAACACTTATTTATTTATTTTTATTTTATTTATTTATTTATTTTTGAGGCACAGTCTCAGTTTGT  2294

Query   18  TGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCT  91
            ||||||||||||.|||.||||||..||||||||||||||||||||||||||||.|.|||||||||||||||.||
Sbjct 2295  TGCCCAGGCTGGGGTGAAGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCTCGGGTTCAAGCGATTCTCCT  2368

Query   92  GCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGA  164
            ||||||||||||..||||||||||||||.||.|||||||||||||.||||.|.|| |||||||.|||||||.||
Sbjct 2369  GCCTCAGCCTCCCAAGTAGCTGGGACTACAGTCATGCACCACCACCCCCGACAAATTTTTGTACTTTTGGTGGA  2442

Query  165  GACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC--ACCACCTCGGCCTCC  236
            |||.||||||..|||||||.|.|||||||||||.|||||||||||||||||.|| ||  ||..||||.||||||
Sbjct 2443  GACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGGGA-CCTGACTGCCTCTGCCTCC  2515

Query  237  CAAAGTGTTGAGA-------------------------------------------------------------  249
            |||||||.||.||                                                             
Sbjct 2516  CAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGTCCCAAACATCTATTAGGTACTTGCTGTATGTGGT  2589

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2590  GAAATAAACCCCAGCTCTCCTGATTCAAGGTTAGTGTTCTTTTCACAAATCTACTTCAATACATCAAATCCTAC  2663

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2664  TTCTCTTTCTTTCTATATTTAACTCATAAATATTCCTCTTCTGTCATTTGTGGTTTTGAAATGTCTGCAAACTC  2737

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2738  ATGGATACTATTCACTTCTAATGAATAGAATAAAGCAGAAGTGATGGAATATAACTTCAGAGGCCATTTCATGA  2811

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2812  AAGCCACTGTGGCTTCCTACTTGTTCTCTTGCTCTCTCTCTTAGAACACTTGCTCTGGGGAAAGCCAGCTGCCA  2885

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2886  TATTGTGAGCAGACCTATGAAAAGGCCCACTTGGTGAAGAACTGAGGCCTCTGGCTGATGGACACATGGGTGAC  2959

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2960  CTTGCAATCAAGTCTTCTGGCTTCAACCAAGCCTTCAGCTGAGACTGCAGCCTCATGAAAGATCCTGAGCTAGA  3033

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3034  AGCATCCTGCCATCCTAATAAGCCACTCTTGAATTTCTGACCCTTAAAAATTGTGAGATAAGCACCTGTGCTTT  3107

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3108  TTTTAAGTGTTAGATTTAAAAAACCCTGAAAAAATAAAGAAGAAAAAAGACAACTCATAATCTCACCACATTAA  3181

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3182  AAAGAATAGCTATAGAAAAATTCCAGTAGTATAAAAAGGAAAAATGGAAATAACTTCCCACCATCCCTGATCTT  3255

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3256  TAGTTCTTTTTCCCACAGTGACATTTTCTTTCCCAAGAAATGTTCATGCATATGCAATATATGTGTAAACCCTT  3329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3330  TAAGATGTTCACAAAAGGATCATGTTACACTCATTCGAAAAACTTAATATTATATCTTGAAGGTGTCTTCATAT  3403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3404  CAGTATATATATATCTATCTTAGTTTGTTAATAGATTTCCCATAATTTAAATGTACCATATTTCTTTTACCAGT  3477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3478  CCCCATATATGGACATTTAGGATATTTCCAGTATTCTTTTCTGTTATAAAAATATGGTGATAAACATTTTCATG  3551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3552  CTTTTTTGAGTATCTTCAAGTAAAGTCCTATGGGTAGCATTCTGGCATCACGTTGTATATGCATTTAAAGTTGA  3625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3626  TGCTATTCACTTGTTCCACAATCTTTGCTCCGAGTTTACACTGATGAAGCATGAGAATGCTATATCCCCACAAA  3699

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3700  CCTGTGCATATTGTTGATAGTAAGCATTGTTTGCTATTTTCTGACTATTCATTTTTCTTCTTTTGAGAATTGCC  3773

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3774  ATGCCTAGAAGAGTGCCTGTCTTGTAATATATAAGATAATAACTTGATAGCTAGCATTTCTGAGGCTTCTTGTG  3847

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3848  CCTTTAACGTATATTTACTGTTTTGATACTTACAAAGACCCTATGAAGTACGTACTATTATTATCTGCTTATGG  3921

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3922  CTGGTGGGAAAACTGAGCTGTACAGAATTTAAACAAACTGTCCCAGGTCACACAACTAGGAAGGGTGGAGCCAG  3995

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3996  GATGCAAATGATACGGAATTTTAAAAAATGGGTAGTTGAGTGAATGAATAAATGGATGACCTGTTTACATCCTT  4069

Query  250  ------------  249
                        
Sbjct 4070  TCTCATTTTTAA  4081

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