Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
XR_001749101.1
Aligned Length:
3501
Identities:
217
Gaps:
3252

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGGCGGCCGCACCTTGCTGCCTCCCTCTTGCAGCTCTCTGACGATGCAGCGACCGCGGCTGGCGGAGATTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCAACGGGGAAAGGTGGACATCCAAAGGTGATACAGCTGGAAAAAGGATCTTCATCCAAGACAAAGAGAAACAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGTCGATAGGAAAGTGATGAAAGGCATCAAGCAAAGTGAAGATGCAAATGAGAAAACAAGATCAGAAGACAGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATATCTGAAACAAGTCACAAATGCATAGTATGACCTCTCAGGTAAGGACCAGGGCTGGATCATCCCAGGATGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAGGCATACTCTCAGGGGGCGCTGTGTTATACTGAGATCTTGCTAGGCAAAAACATGGTTTTTGTCTTTTCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTGAAAAGGTACCTTTTGGGAGGCCAGGCGCGGTGGCTTACTCCTGTAATCCCAGCACTTTGGGAGGCTGAGGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGCGGATCACCTGAGGTAGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCTTCTCTACTAAAAATA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAAAATTAGCCAGGTGTGGTGGCACATGCCTGTAATGCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGTTTA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AACTCAGGAGGTGGAGGTGGCGGTGAGCCGAGATCATGCCATTGCACTCCAGCTTGAGCAAAAAGAGCAAAATT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCGTCTCAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAAGAAAAAGAAAAGAAAAGGTACCTTTTGGGAAGAAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CATTAAAAAAATTTTTTTTTTCCGCTGGCAGTATTTAGGAAGAAGAATTCTATTTATTACTTCAGTAGAGTAAC  814

Query    1  ------------------------------------------------------ATGGAGTCTCGCTCTGTTGC  20
                                                                  |..|||||||.|||||||||
Sbjct  815  ATGCTTTACTAAAATAAGCTTCCATTCTACATGGTTTTTTTTTTTTTTTTTTAGACAGAGTCTCACTCTGTTGC  888

Query   21  CCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCC  94
            |||||||||||||||||||...|||||||||||||||||||||||||||||..|||||.||.|.||||.|||||
Sbjct  889  CCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCGAGTGTTTCTCCTGCC  962

Query   95  TCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGAC  167
            |||||||||.|||||||||||||||.||...|.|||||||||.||||||||| |||||||.||||.||.|||||
Sbjct  963  TCAGCCTCCCGAGTAGCTGGGACTACAGGAGTACACCACCACACCCGGCTAATTTTTGTAATTTTAGTAGAGAC  1036

Query  168  GGGG-TTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAA  239
            |||| |||..||||.||.|||||||||||||.|||||||||||||||.|||||||||| .|||.||||||||||
Sbjct 1037  GGGGATTTCACCATATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAA  1110

Query  240  AGTGTTGAGA----------------------------------------------------------------  249
            ||||.||.||                                                                
Sbjct 1111  AGTGCTGGGATTACAGGCATGAACCACTGCGCCTGGCCCATGATTGTTCTTAAAATAAGAAACACCACATAATA  1184

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1185  TTCAGTGTTCCTTATTTTGAAGGGCTCTTTATTTGGTTATATTTTAGGCATATGAAGCTATTTCATAATCCCAA  1258

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1259  AAGGGGTATTTAATGAGATTTAGAATTGATAGTCTTCTGTTGATATATATTTATAGTTATTTATACACATATTT  1332

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1333  GTATGTTCTTAAAATAAAATGTTCAAAGTTTTTGATTCAAATGTAACATGTCTAAAATTGAAATCATTGTTTTT  1406

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1407  TTGTTTTTTTTTTTTCACAACTCAAACCCTCTTCTTTTCCCATAAACACCATATTGGGAAATGGCACCACCATG  1480

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1481  GGCATAGTTGCTCAAGCTAGAAGGATGGGGGTATTTTGGCTCATCCCCTTCACTCTTCACATCTAATTAATTCC  1554

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1555  CTCTTTTGAGTAACATTTACTAAGTGCCAGGCCTTCTGCTAGTCTTTCGTGAAGCTTGGAGTTAGAGTGAGAGA  1628

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1629  CCGATATTACTCAAATGATCTTGCCAGTGAATGTACAAGTTACAGGTGGAGATAAGTGCTCTGCAGAAAGGAGC  1702

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1703  ATGACTCTTGTGAGAGAAACAGAAGACCATGTTCTGAACTGGGAATCAAGGAAGACTTCCCTGAGGACGTGACC  1776

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1777  CTTGTTTGGACTCTATTCTGTTTATGCTAAGGATTTTAATAAGGAGCAGGTGATGGACATGATCCAGCGTACAT  1850

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1851  TTTTAGAGGAATATCATGAGTCCTATCACTTCATCTCCTAAATATTTCTGACATCTGTTCTCTTTCCTCCATCC  1924

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1925  TCACGACCTTCACTGGCATGGGCCTCCAACAGCTCACTGTGGGGGAAGTTTCCCTCAAAGGGCACTGATAACAC  1998

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1999  ATCTTATTAAAACTATACCACATCATTATACCTCCCCAACATAATATGTACATGTATGTATTTGACAATAATAT  2072

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2073  ATATGTATTACTGTCCTATTTATTATATACATTAAAAACATTCACAAAAAATTAAAAATCCAAATGGTAAGATT  2146

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2147  TTACATTTTTGATTTGATAACAATACTTTATTATATTACTAAACATATATTCCTAATTGTCACTAAGATATTAT  2220

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2221  CATGTTAGAGAAATTTGCTTCACTATACTATATCATTTTTTTAAATCTTAGTTTAATACTCTCTGATACAGCAA  2294

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2295  TTCACAAGTCTACTTCCAACTCTGGCTTATTTTGATTCTTTCATGTAATGGCTGTCATAGCTGAAAAGGGACCT  2368

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2369  CACAGAGACCCAATGGAGGCAGTGTCCTATTGGCTATACTTCCCAAATCAAGCCATTCATTTCTCAATCCCATT  2442

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2443  CACTAATTTACAGAGATTTACTTATTTTTCATTGCTAGTCTGCAAATGTACACTTAAATGAAGGTCATCCTTAA  2516

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2517  TAATTATGAATGTGAACCCATGAAACCTACTTCATAATTCTGAATTTGTTTTGACAGATTCTTTTCCACAGTTA  2590

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2591  GAGGGCCATTGCTATACCTGACATTGTGGCTGACAAAAGAGCTCTTATTAGGACTGGAAGTGTCAGTTCTACTT  2664

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2665  TTTCTTCTTTCTTTATGCTCATGTTATTATTATTTTTTAAATCTGAAGTTTAGAGGAATCTTTTAACTCTACTT  2738

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2739  GTCTATTTGGGAAGACACACTAAACTAGATAATATAATTTATAAATTCCCTCAACTAAGCACACAGAACTGTAA  2812

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2813  TACATTGAAATCTGCCAAAGAGAACAAATCAGTGAGGGCACGACTGTATTCCTTTGTGTCTTTTTCAAGACACC  2886

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2887  TTGAGTACTGTAAGTGACAGGGAGCCATCTGATGTACAGGCTGAAGGGGGCCACCATCAACCTAGTAACCTAAA  2960

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2961  CAGAAGTTCCAATATTTTCACCCTGCAGTCCACTTTGTAACCTTTTCTTAGCCTTCCACAAGAGTCTCCTAACT  3034

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3035  GGACTCCCTCCATCCACTTCTGGGCACCTAATGTCTCTACTACAGATTAGAAATTACTTTCACAGAAGGCCATT  3108

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3109  TCTGAAACCCAAACTAGCTTATGTGTTACCCTACATTGAAATTATTCAGACGCTGTCTTCCCCAGTAATCTGCA  3182

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3183  AGTTTCACAAAGGTAGATGCCATGTTCTTAATGGTTTCCCAGCACATAGCACATAACAGAAGCTCAATAAATAT  3256

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3257  TTGTTGAATGAATAAATGAGTAAACAGAATATTTTTACAGTTAAATACCTTTAATTCTTTTATTTTTTTTAAAT  3330

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3331  TTCAAGTCCTTAGAGGAGGAAGAATTGAAAAAATATGAAATATCAAATATACATTTAGCTAAATTTTTAAAGTT  3404

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3405  TAGTAGGCTATATGCATAAATCAAATGAATAGCAATATTTGGAACTGTAACTATTTTTGGAATCTTGTATGAAT  3478

Query  250  -----------------------  249
                                   
Sbjct 3479  AAATTACAAGTTTAAAACATCAA  3501

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