Nucleotide Global Alignment

Description

Query:
TRCN0000472287
Subject:
XR_938936.2
Aligned Length:
4174
Identities:
217
Gaps:
3926

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTCCGGACCACCTCGCAGCGCCGCGTCCTTAGGGGCGGGCTCGGGGGGCACCACCCTCGAGGGGCGGAACCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGGGCGGTGGCGTGGATCCGGAGGTACCTGGTTTCTGAGCAAGATGCTTGCATGAAAGATTCAATCTAAGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAATGCAAAAATATTGTGAAAGCAGCAGGATCAGCTAGCCTTCCAGTTGGCTTCTTAAATGCTGCATTGAAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATGAAACAGAACGGATGTGAACAAGAGTTCCCTGAGAAAGGACAGCTCTTAGAGAGATAGGATAATTACTGGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCAAGAAGATACCAAATCATGGTGTGCATTTCTGCGTTGTGTTTGGAAGAGGAACTAGGATTGTTATGAAAAGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGGATGTGTTCAACTTAGAAGAATTAAACCTCAACCATCTGTCTCTTCCAAATGGCATTCTTGATTCTAAAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCTTAAGTAGAGTGTAAAGTTATTGTTGGATACTGTAGTAGCCAGGCTAAGCTGAGCTATTCAGTGGAACAGAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAACCCGAAAATCTCAGTGGCTTAACACAACAAGATTTATTTCTTTTTAGTATCACAATCTGATGTAGATTGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTGGTCTCCTGCTTGGCTTTCCATCAAGTGACAGCTCAGGGATCCAAGTTGCTTTTATTTGGAAACTGTCATCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAGAGCATTTTGTTTCCAGCTGTATGGACAGGAGATCCAGAAGGTGTGGAGAAGTGCATCCTTCCTGGATCAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAATGATACATCACTTTAGCTCACATTCCATTGTTAAGAATTAGTGACATGATCCCACTGGGATTCATGGGGTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGGATATGGAACACTTGGATATTTGGCGAGCATGAACAATCTTTGCCATAGAAACATTGCCTCTATAATGTTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCTATATCCCTTATCTTCTCATGGTAGATTTCACATAGGATTAGTATCAGGAAAACGTTTTTCTCTCCTAAAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGTTGGTATTCTTCTTTTTTCCCTCTGGAGTCAGGAACTTTAGATTTAATATTAATGACTATCTAATCTGAGAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTTTAGTAGCATCATGTATCCTATTTCTCTATTGTGTTTCTGGAATAGTTTTATTATTGTATTTTAACTGACTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACTGTATTTGATTTTTTAAAAATTGCCATAATCCTTTCTAGTTTTAGCTGTTCATTTAATGAACACTTACCAAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGCAGATGTGTTGATAAGGATGAAGGATGTTTTTGGCTGCAACAGAAAAACTAATAAGTGGTTTAAGCAATAAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGTTTAATTATCTGACACAAGAAGTCTGGCAGTTTCAGGATAGGTTAATTCAATGGTGTGATATCATAGAGGAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CATGTATACTCACTTTTTCTGTTTTATAAACTTCAGCGTTTGATGGTGTTCCCCCTTCCTGTCACATACAGGTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGTAGTTCCAAGTGTTGCTTGTCATGGTAGACCCTAGTCAGGCCTGGGTCTTGTGACGCAGGAGACAAATATGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCATAGACTTGTCGTTATGACATGGCTGCAGTGTGGTGCCACCAGGCCTGCATCACGCCTACTCATCATATAAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ATTAGATTATATAGTCTGTGGAAAATGTTGCAAAATGATACTGGTGGCAGGGTCAGAAATTGTATTCAGACTTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GATGTTAGATCCAGGCAAATGGCTTGTTGAAAAGAGATTTCTCTTTAGAGAGAAATCATGTTGGTGTACCAGGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GACATGTTTGGTTGGGGGTGGGGTGGGGGGACTGCTTGGATAGCATGGTAGTGATAGAAGTGTGATAAGCTGGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGCTGGATATAGTTAGAAGGATTTACTGATCAATTGGATGTGAGGAGTGATATAGAGAGAGATGTTGGGAATGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CTCCAAGTTTTGGCCTGAGTGATGGGAAAAATTGAGTTGCTATTTATCAAGATAGGGAAGACCAATGAGTTTGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TGCTGTCATAAAATAAAATGTATCAGATTTTTAGCAACAACTGGAAGTAAGACATTGCAAGGAGTCTGGGCTGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCTGAGATAGAGTTCAGATGGGGAGCTGGAATCAGACTGCTGCCCCAGGTCCTGGGACCCTGCCATGCAGAAAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GACACCTGGCATGGGCAAGGACTCCAGTATGCCGGAGCCTCTTCCTCCTTTCTCAGGCCAAATTTGTGTCCTTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CAAAATTTGGCTACAAATGTTAAATTTACAAAGACCTCTGATACCCATTATCCCACCCAACTCTCTGGAGAGCC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTTGTAATGTGGTAACTGCTCTTATGCACATAGCCAAAGACTTGAAAACAGTCTCAGAAAAGCTGTAATTTCTA  2294

Query    1  ------------------------------------------------------------------AT------  2
                                                                              ||      
Sbjct 2295  CCTTCATTCATTTAAAGAAAACTTACTAAACACTTATTTATTTATTTTTATTTTATTTATTTATTTATTTTTGA  2368

Query    3  GG---AGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCA  73
            ||   ||||||..|.|||||||||||||||.|||.||||||..||||||||||||||||||||||||||||.|.
Sbjct 2369  GGCACAGTCTCAGTTTGTTGCCCAGGCTGGGGTGAAGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCTCG  2442

Query   74  GGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-  146
            |||||||||||||||.||||||||||||||..||||||||||||||.||.|||||||||||||.||||.|.|| 
Sbjct 2443  GGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGTCATGCACCACCACCCCCGACAAAT  2516

Query  147  TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATC  220
            |||||||.|||||||.|||||.||||||..|||||||.|.|||||||||||.|||||||||||||||||.|| |
Sbjct 2517  TTTTGTACTTTTGGTGGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGGGA-C  2589

Query  221  C--ACCACCTCGGCCTCCCAAAGTGTTGAGA-------------------------------------------  249
            |  ||..||||.|||||||||||||.||.||                                           
Sbjct 2590  CTGACTGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCTGGTCCCAAACATCTATTAG  2663

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2664  GTACTTGCTGTATGTGGTGAAATAAACCCCAGCTCTCCTGATTCAAGGTTAGTGTTCTTTTCACAAATCTACTT  2737

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2738  CAATACATCAAATCCTACTTCTCTTTCTTTCTATATTTAACTCATAAATATTCCTCTTCTGTCATTTGTGGTTT  2811

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2812  TGAAATGTCTGCAAACTCATGGATACTATTCACTTCTAATGAATAGAATAAAGCAGAAGTGATGGAATATAACT  2885

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2886  TCAGAGGCCATTTCATGAAAGCCACTGTGGCTTCCTACTTGTTCTCTTGCTCTCTCTCTTAGAACACTTGCTCT  2959

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2960  GGGGAAAGCCAGCTGCCATATTGTGAGCAGACCTATGAAAAGGCCCACTTGGTGAAGAACTGAGGCCTCTGGCT  3033

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3034  GATGGACACATGGGTGACCTTGCAATCAAGTCTTCTGGCTTCAACCAAGCCTTCAGCTGAGACTGCAGCCTCAT  3107

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3108  GAAAGATCCTGAGCTAGAAGCATCCTGCCATCCTAATAAGCCACTCTTGAATTTCTGACCCTTAAAAATTGTGA  3181

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3182  GATAAGCACCTGTGCTTTTTTTAAGTGTTAGATTTAAAAAACCCTGAAAAAATAAAGAAGAAAAAAGACAACTC  3255

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3256  ATAATCTCACCACATTAAAAAGAATAGCTATAGAAAAATTCCAGTAGTATAAAAAGGAAAAATGGAAATAACTT  3329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3330  CCCACCATCCCTGATCTTTAGTTCTTTTTCCCACAGTGACATTTTCTTTCCCAAGAAATGTTCATGCATATGCA  3403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3404  ATATATGTGTAAACCCTTTAAGATGTTCACAAAAGGATCATGTTACACTCATTCGAAAAACTTAATATTATATC  3477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3478  TTGAAGGTGTCTTCATATCAGTATATATATATCTATCTTAGTTTGTTAATAGATTTCCCATAATTTAAATGTAC  3551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3552  CATATTTCTTTTACCAGTCCCCATATATGGACATTTAGGATATTTCCAGTATTCTTTTCTGTTATAAAAATATG  3625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3626  GTGATAAACATTTTCATGCTTTTTTGAGTATCTTCAAGTAAAGTCCTATGGGTAGCATTCTGGCATCACGTTGT  3699

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3700  ATATGCATTTAAAGTTGATGCTATTCACTTGTTCCACAATCTTTGCTCCGAGTTTACACTGATGAAGCATGAGA  3773

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3774  ATGCTATATCCCCACAAACCTGTGCATATTGTTGATAGTAAGCATTGTTTGCTATTTTCTGACTATTCATTTTT  3847

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3848  CTTCTTTTGAGAATTGCCATGCCTAGAAGAGTGCCTGTCTTGTAATATATAAGATAATAACTTGATAGCTAGCA  3921

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3922  TTTCTGAGGCTTCTTGTGCCTTTAACGTATATTTACTGTTTTGATACTTACAAAGACCCTATGAAGTACGTACT  3995

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3996  ATTATTATCTGCTTATGGCTGGTGGGAAAACTGAGCTGTACAGAATTTAAACAAACTGTCCCAGGTCACACAAC  4069

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4070  TAGGAAGGGTGGAGCCAGGATGCAAATGATACGGAATTTTAAAAAATGGGTAGTTGAGTGAATGAATAAATGGA  4143

Query  250  ------------------------------  249
                                          
Sbjct 4144  TGACCTGTTTACATCCTTTCTCATTTTTAA  4173

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