Nucleotide Global Alignment

Description

Query:
TRCN0000472827
Subject:
XM_011512992.2
Aligned Length:
2175
Identities:
2059
Gaps:
114

Alignment

Query    1  ATGGCGGCGGCCTCTGCGGTGTCGGTGCTGCTGGTGGCGGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCTCCTGCCGCCGAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGAAGAAACATTA  148
                                                    ||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------------------------------ATGAAGTACACAACAGCCACAGGAAGAAACATTA  34

Query  149  CCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACAG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   35  CCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACAG  108

Query  223  ACTGTGGCGGTTTATAGTGAGGCTGACAGAAATTCCATGCATGTAGATATGGCAGATGAAGCATATTCCATCGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  109  ACTGTGGCGGTTTATAGTGAGGCTGACAGAAATTCCATGCATGTAGATATGGCAGATGAAGCATATTCCATCGG  182

Query  297  CCCCGCTCCCTCCCAGCAGAGCTACCTATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  183  CCCCGCTCCCTCCCAGCAGAGCTACCTATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGG  256

Query  371  CTATCCATCCAGGATGCGGTTTTCTTTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATT  444
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  257  CTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATT  330

Query  445  TTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATAAAGAGCACATCCAAATCCATAATGGCTGCTGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  331  TTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATAAAGAGCACATCCAAATCCATAATGGCTGCTGC  404

Query  519  TGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  405  TGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAA  478

Query  593  TTGGCTATCCTGTCATGATTAAAGCCGTCCGGGGTGGAGGAGGAAAAGGAATGAGGATTGTTAGATCAGAACAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  479  TTGGCTATCCTGTCATGATTAAAGCCGTCCGGGGTGGAGGAGGAAAAGGAATGAGGATTGTTAGATCAGAACAA  552

Query  667  GAATTTCAAGAACAGTTAGAGTCAGCACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  553  GAATTTCAAGAACAGTTAGAGTCAGCACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGA  626

Query  741  GAAGTTTGTAGACACACCGAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  627  GAAGTTTGTAGACACACCGAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGT  700

Query  815  TTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAATCT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  701  TTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAATCT  774

Query  889  GAAGTAAGAAAAAAGCTGGGAGAAGCTGCAGTCAGAGCTGCTAAAGCTGTAAATTATGTTGGAGCAGGGACTGT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  775  GAAGTAAGAAAAAAGCTGGGAGAAGCTGCAGTCAGAGCTGCTAAAGCTGTAAATTATGTTGGAGCAGGGACTGT  848

Query  963  GGAGTTTATTATGGACTCAAAACATAATTTCTGTTTCATGGAGATGAATACAAGGCTGCAAGTGGAACATCCTG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  849  GGAGTTTATTATGGACTCAAAACATAATTTCTGTTTCATGGAGATGAATACAAGGCTGCAAGTGGAACATCCTG  922

Query 1037  TTACTGAGATGATCACAGGAACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCTTTG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  923  TTACTGAGATGATCACAGGAACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCTTTG  996

Query 1111  AGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  997  AGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTT  1070

Query 1185  CATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1071  CATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAG  1144

Query 1259  TACGGCAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1145  TACGGCAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGC  1218

Query 1333  CAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGGACTGCCCACCAACATTGACTT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1219  CAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGGACTGCACACCAACATTGACTT  1292

Query 1407  CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293  CTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACA  1366

Query 1481  AACAGTTGTTGCTCAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1367  AACAGTTGTTGCTCAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAG  1440

Query 1555  GAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAG  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441  GAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAG  1514

Query 1629  AAGACTGAATATCTCGTATACCAGAAACATGACTCTTAAAGATGGTAAAAACAATGTAGCCATAGCTGTAACGT  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1515  AAGACTGAATATCTCGTATACCAGAAACATGACTCTTAAAGATGGTAAAAACAATGTAGCCATAGCTGTAACGT  1588

Query 1703  ATAACCATGATGGGTCTTATAGCATGCAGATTGAAGATAAAACTTTCCAAGTCCTTGGTAATCTTTACAGCGAG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1589  ATAACCATGATGGGTCTTATAGCATGCAGATTGAAGATAAAACTTTCCAAGTCCTTGGTAATCTTTACAGCGAG  1662

Query 1777  GGAGACTGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1663  GGAGACTGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACAC  1736

Query 1851  TATTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCT  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1737  TATTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCT  1810

Query 1925  CACAAGAAACTCAGGGCGGCCCCTTAGCTCCTATGACTGGAACCATTGAAAAGGTGTTTGTCAAAGCTGGAGAC  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811  CACAAGAAACTCAGGGCGGCCCCTTAGCTCCTATGACTGGAACCATTGAAAAGGTGTTTGTCAAAGCTGGAGAC  1884

Query 1999  AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGA  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1885  AAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGA  1958

Query 2073  TGGCACAGTAAAGAAAGTGTTCTACAGAGAAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGG  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1959  TGGCACAGTAAAGAAAGTGTTCTACAGAGAAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGG  2032

Query 2147  AGGAAGAATCAGACAAAAGGGAATCGGAA  2175
            |||||||||||||||||||||||||||||
Sbjct 2033  AGGAAGAATCAGACAAAAGGGAATCGGAA  2061

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