Nucleotide Global Alignment

Description

Query:
TRCN0000472827
Subject:
XR_001740209.2
Aligned Length:
2486
Identities:
1907
Gaps:
578

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCACGAGGCTTCGTAGTGGAGGAACGGGTTTGGCGTGTGGGACGCAGCTGCCTCTGTACTGGGGAGTCACGGA  74

Query    1  -------------------ATGGCGGCGGCCTCTGCGGTGTCGGTGCTGCTGGTGGCGGCGGAGAGGAACCGGT  55
                               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GTGGCCGGGCTCCAGGGACATGGCGGCGGCCTCTGCGGTGTCGGTGCTGCTGGTGGCGGCGGAGAGGAACCGGT  148

Query   56  GGCATCGTCTCCCGAGCCTGCTCCTGCCGCCGAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACACAACA  129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGCATCGTCTCCCGAGCCTGCTCCTGCCGCCGAGGACATGGGTGTGGAGGCAAAGAACCATGAAGTACACAACA  222

Query  130  GCCACAGGAAGAAACATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAGC  203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCACAGGAAGAAACATTACCAAGGTCCTCATTGCAAACAGAGGAGAAATTGCCTGCAGGGTGATGCGCACAGC  296

Query  204  CAAAAAACTGGGTGTACAGACTGTGGCGGTTTATAGTGAGGCTGACAGAAATTCCATGCATGTAGATATGGCAG  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAAAAAACTGGGTGTACAGACTGTGGCGGTTTATAGTGAGGCTGACAGAAATTCCATGCATGTAGATATGGCAG  370

Query  278  ATGAAGCATATTCCATCGGCCCCGCTCCCTCCCAGCAGAGCTACCTATCTATGGAGAAAATCATTCAAGTGGCC  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGAAGCATATTCCATCGGCCCCGCTCCCTCCCAGCAGAGCTACCTATCTATGGAGAAAATCATTCAAGTGGCC  444

Query  352  AAGACCTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTTTCAGAAAACATGGAATTTGCTGAACTTTG  425
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  445  AAGACCTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTTTCTCTCAGAAAACATGGAATTTGCTGAACTTTG  518

Query  426  TAAGCAAGAAGGAATTATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATAAAGAGCACATCCA  499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TAAGCAAGAAGGAATTATTTTTATAGGCCCTCCTCCATCTGCAATTAGAGACATGGGTATAAAGAGCACATCCA  592

Query  500  AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCCTG  573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTATCATGGTGAGGACCAATCAGACCAGTGCCTG  666

Query  574  AAGGAACACGCCAGGAGAATTGGCTATCCTGTCATGATTAAAGCCGTCCGGGGTGGAGGAGGAAAAGGAATGAG  647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGGAACACGCCAGGAGAATTGGCTATCCTGTCATGATTAAAGCCGTCCGGGGTGGAGGAGGAAAAGGAATGAG  740

Query  648  GATTGTTAGATCAGAACAAGAATTTCAAGAACAGTTAGAGTCAGCACGGAGAGAAGCTAAGAAGTCTTTCAATG  721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATTGTTAGATCAGAACAAGAATTTCAAGAACAGTTAGAGTCAGCACGGAGAGAAGCTAAGAAGTCTTTCAATG  814

Query  722  ATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCAT  795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCATGTAGAAGTCCAGGTGTTTGGTGATCACCAT  888

Query  796  GGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCC  869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCC  962

Query  870  AGCGCCTGGTATTAAATCTGAAGTAAGAAAAAAGCTGGGAGAAGCTGCAGTCAGAGCTGCTAAAGCTGTAAATT  943
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGCGCCTGGTATTAAATCTGAAGTAAGAAAAAAGCTGGGAGAAGCTGCAGTCAGAGCTGCTAAAGCTGTAAATT  1036

Query  944  ATGTTGGAGCAGGGACTGTGGAGTTTATTATGGACTCAAAACATAATTTCTGTTTCATGGAGATGAATACAAGG  1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ATGTTGGAGCAGGGACTGTGGAGTTTATTATGGACTCAAAACATAATTTCTGTTTCATGGAGATGAATACAAGG  1110

Query 1018  CTGCAAGTGGAACATCCTGTTACTGAGATGATCACAGGAACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC  1091
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTGCAAGTGGAACATCCTGTTACTGAGATGATCACAGGAACTGACTTGGTGGAGTGGCAGCTTAGAATTGCAGC  1184

Query 1092  AGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAG  1165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCTTCGAAGCTAGAATATATGCAG  1258

Query 1166  AAGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGACCCTTCC  1239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGACCCTTCC  1332

Query 1240  ACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGT  1313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCCGTGCATTATGACCCCATGATTGCGAAGCTGGT  1406

Query 1314  CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAATATTGTTGGAC  1387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct 1407  CGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGTACAGCCTTCGTCAGTACAAT----------  1470

Query 1388  TGCCCACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCCAGAGTTTGAAGCTGGGAACGTGCACACTGAT  1461
                                                                                      
Sbjct 1471  --------------------------------------------------------------------------  1470

Query 1462  TTCATCCCTCAACACCACAAACAGTTGTTGCTCAGTCGGAAGGCTGCAGCCAAAGAGTCTTTATGCCAGGCAGC  1535
                                                                                      
Sbjct 1471  --------------------------------------------------------------------------  1470

Query 1536  CCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCACTCTTCAGGCACATGATCAATTCTCTCCAT  1609
                                                                       |||||||||||||||
Sbjct 1471  -----------------------------------------------------------ATCAATTCTCTCCAT  1485

Query 1610  TTTCGTCTAGCAGTGGAAGAAGACTGAATATCTCGTATACCAGAAACATGACTCTTAAAGATGGTAAAAACAAT  1683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct 1486  TTTCGTCTAGCAGTGGAAGAAGACTGAATATCTCGTATACCAGAAACATGACTCTTAAAGATGGTAAAAACA--  1557

Query 1684  GTAGCCATAGCTGTAACGTATAACCATGATGGGTCTTATAGCATGCAGATTGAAGATAAAACTTTCCAAGTCCT  1757
                                                            ||||||||||||||||||||||||||
Sbjct 1558  ------------------------------------------------ATTGAAGATAAAACTTTCCAAGTCCT  1583

Query 1758  TGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGC  1831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1584  TGGTAATCTTTACAGCGAGGGAGACTGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGC  1657

Query 1832  TGATTATCCTGGAAAACACTATTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAA  1905
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1658  TGATTATCCTGGAAAACACTATTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAA  1731

Query 1906  TACTTATCTTCTGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGCTCCTATGACTGGAACCATTGAAAAGGT  1979
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1732  TACTTATCTTCTGTGAGCTCACAAGAAACTCAGGGCGGCCCCTTAGCTCCTATGACTGGAACCATTGAAAAGGT  1805

Query 1980  GTTTGTCAAAGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATA  2053
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1806  GTTTGTCAAAGCTGGAGACAAAGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATA  1879

Query 2054  CCATAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGTTCTACAGAGAAGGTGCTCAGGCCAACAGACACACT  2127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1880  CCATAAAGTCTCCAAAGGATGGCACAGTAAAGAAAGTGTTCTACAGAGAAGGTGCTCAGGCCAACAGACACACT  1953

Query 2128  CCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCGGAA--------------------------  2175
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct 1954  CCTTTAGTCGAGTTTGAGGAGGAAGAATCAGACAAAAGGGAATCGGAATAAACTCCAGCAAGGAAATGGCCAGT  2027

Query 2176  --------------------------------------------------------------------------  2175
                                                                                      
Sbjct 2028  TAAGTAGTGTCTTCTCTCTCCACCAAAAAGAGGAAGTGCCTCCAGCTTTTCTGGGGGTCTCATAAAGAGCAGTT  2101

Query 2176  --------------------------------------------------------------------------  2175
                                                                                      
Sbjct 2102  TTACTAAATGATTGTATGCTTATGCTGAACACCTTTCATATTGGAGAATCATGCATTTGGGTCACTAATTATCT  2175

Query 2176  --------------------------------------------  2175
                                                        
Sbjct 2176  CAAAATATTTCATACTAATAAAGTTGAATTATTTTTTATTGGAA  2219

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