Nucleotide Global Alignment

Description

Query:
TRCN0000472827
Subject:
XR_002959554.1
Aligned Length:
2395
Identities:
1513
Gaps:
881

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGGCTCAGGCTCCGACGGTGGCCGGCGGGGGTCACGAGGCTTCGTAGTGGAGGAACGGGTTTGGCGTGTGGGAC  74

Query    1  -------------------------------------------------ATGGCGGCGGCCTCTGCGGTGTCGG  25
                                                             |||||||||||||||||||||||||
Sbjct   75  GCAGCTGCCTCTGTACTGGGGAGTCACGGAGTGGCCGGGCTCCAGGGACATGGCGGCGGCCTCTGCGGTGTCGG  148

Query   26  TGCTGCTGGTGGCGGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCTGCTCCTGCCGCCGAGGACATGGGTG  99
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCTGCTGGTGGCGGCGGAGAGGAACCGGTGGCATCGTCTCCCGAGCCTGCTCCTGCCGCCGAGGACATGGGTG  222

Query  100  TGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGAAGAAACATTACCAAGGTCCTCATTGCAAACAGAGG  173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGGAGGCAAAGAACCATGAAGTACACAACAGCCACAGGAAGAAACATTACCAAGGTCCTCATTGCAAACAGAGG  296

Query  174  AGAAATTGCCTGCAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACAGACTGTGGCGGTTTATAGTGAGGCTG  247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGAAATTGCCTGCAGGGTGATGCGCACAGCCAAAAAACTGGGTGTACAGACTGTGGCGGTTTATAGTGAGGCTG  370

Query  248  ACAGAAATTCCATGCATGTAGATATGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCAGCAGAGCTAC  321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACAGAAATTCCATGCATGTAGATATGGCAGATGAAGCATATTCCATCGGCCCCGCTCCCTCCCAGCAGAGCTAC  444

Query  322  CTATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTTTCT  395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTATCTATGGAGAAAATCATTCAAGTGGCCAAGACCTCTGCTGCACAGGCTATCCATCCAGGATGCGGTTTTCT  518

Query  396  TTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATTTTTATAGGCCCTCCTCCATCTGCAA  469
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCAGAAAACATGGAATTTGCTGAACTTTGTAAGCAAGAAGGAATTATTTTTATAGGCCCTCCTCCATCTGCAA  592

Query  470  TTAGAGACATGGGTATAAAGAGCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTAT  543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTAGAGACATGGGTATAAAGAGCACATCCAAATCCATAATGGCTGCTGCTGGAGTACCTGTTGTGGAGGGTTAT  666

Query  544  CATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATCCTGTCATGATTAAAGC  617
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CATGGTGAGGACCAATCAGACCAGTGCCTGAAGGAACACGCCAGGAGAATTGGCTATCCTGTCATGATTAAAGC  740

Query  618  CGTCCGGGGTGGAGGAGGAAAAGGAATGAGGATTGTTAGATCAGAACAAGAATTTCAAGAACAGTTAGAGTCAG  691
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CGTCCGGGGTGGAGGAGGAAAAGGAATGAGGATTGTTAGATCAGAACAAGAATTTCAAGAACAGTTAGAGTCAG  814

Query  692  CACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCAT  765
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACGGAGAGAAGCTAAGAAGTCTTTCAATGATGATGCTATGCTGATCGAGAAGTTTGTAGACACACCGAGGCAT  888

Query  766  GTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAG  839
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTAGAAGTCCAGGTGTTTGGTGATCACCATGGCAATGCTGTGTACTTGTTTGAAAGAGACTGTAGTGTGCAGAG  962

Query  840  GCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAATCTGAAGTAAGAAAAAAGCTGGGAGAAG  913
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCGACATCAGAAGATCATTGAGGAGGCCCCAGCGCCTGGTATTAAATCTGAAGTAAGAAAAAAGCTGGGAGAAG  1036

Query  914  CTGCAGTCAGAGCTGCTAAAGCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTTATTATGGACTCAAAACAT  987
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTGCAGTCAGAGCTGCTAAAGCTGTAAATTATGTTGGAGCAGGGACTGTGGAGTTTATTATGGACTCAAAACAT  1110

Query  988  AATTTCTGTTTCATGGAGATGAATACAAGGCTGCAAGTGGAACATCCTGTTACTGAGATGATCACAGGAACTGA  1061
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AATTTCTGTTTCATGGAGATGAATACAAGGCTGCAAGTGGAACATCCTGTTACTGAGATGATCACAGGAACTGA  1184

Query 1062  CTTGGTGGAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGG  1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTTGGTGGAGTGGCAGCTTAGAATTGCAGCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGG  1258

Query 1136  GCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTG  1209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCCATGCCTTCGAAGCTAGAATATATGCAGAAGATCCTAGCAATAACTTCATGCCTGTGGCAGGCCCATTAGTG  1332

Query 1210  CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCCGT  1283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTGGAGTACGGCAAGGAGACGAAGTTTCCGT  1406

Query 1284  GCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGT  1357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCATTATGACCCCATGATTGCGAAGCTGGTCGTGTGGGCAGCAGATCGCCAGGCGGCATTGACAAAACTGAGGT  1480

Query 1358  ACAGCCTTCGTCAGTACAATATTGTTGGACTGCCCACCAACATTGACTTCTTACTCAACCTGTCTGGCCACCCA  1431
            ||||||||||||||||||||                                                      
Sbjct 1481  ACAGCCTTCGTCAGTACAAT------------------------------------------------------  1500

Query 1432  GAGTTTGAAGCTGGGAACGTGCACACTGATTTCATCCCTCAACACCACAAACAGTTGTTGCTCAGTCGGAAGGC  1505
                                                                                      
Sbjct 1501  --------------------------------------------------------------------------  1500

Query 1506  TGCAGCCAAAGAGTCTTTATGCCAGGCAGCCCTGGGTCTCATCCTCAAGGAGAAAGCCATGACCGACACTTTCA  1579
                                                                                      
Sbjct 1501  --------------------------------------------------------------------------  1500

Query 1580  CTCTTCAGGCACATGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATCTCGTATACCAGA  1653
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501  ---------------ATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACTGAATATCTCGTATACCAGA  1559

Query 1654  AACATGACTCTTAAAGATGGTAAAAAC-----------------------------------------------  1680
            |||||||||||||||||||||||||||                                               
Sbjct 1560  AACATGACTCTTAAAGATGGTAAAAACAGTTTTCGTCTCCTCGGATAATCAACCATTTCCATACTCATGTAATC  1633

Query 1681  --------------------------------------------------AATGTAGCCATAGCTGTAACGTAT  1704
                                                              ||||||||||||||||||||||||
Sbjct 1634  TAGGCATACTCTGGAGTTATTACAGGTTTGGTTCCAGACCACTACAATAAAATGTAGCCATAGCTGTAACGTAT  1707

Query 1705  AACCATGATGGGTCTTATAGCATGCAGATTGAAGATAAAACTTTCCAAGTCCTTGGTAATCTTTACAGCGAGGG  1778
            |||||||||||||||||||||||||||                                               
Sbjct 1708  AACCATGATGGGTCTTATAGCATGCAG-----------------------------------------------  1734

Query 1779  AGACTGCACTTACCTGAAATGTTCTGTTAATGGAGTTGCTAGTAAAGCGAAGCTGATTATCCTGGAAAACACTA  1852
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 1853  TTTACCTATTTTCCAAGGAAGGAAGTATTGAGATTGACATTCCAGTCCCCAAATACTTATCTTCTGTGAGCTCA  1926
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 1927  CAAGAAACTCAGGGCGGCCCCTTAGCTCCTATGACTGGAACCATTGAAAAGGTGTTTGTCAAAGCTGGAGACAA  2000
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2001  AGTGAAAGCGGGAGATTCCCTCATGGTTATGATCGCCATGAAGATGGAGCATACCATAAAGTCTCCAAAGGATG  2074
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2075  GCACAGTAAAGAAAGTGTTCTACAGAGAAGGTGCTCAGGCCAACAGACACACTCCTTTAGTCGAGTTTGAGGAG  2148
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2149  GAAGAATCAGACAAAAGGGAATCGGAA  2175
                                       
Sbjct 1735  ---------------------------  1734

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